RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Haus8Q99L00 373 aa11.19□□□□□ -0.62
Ciita-201ENSMUST00000023147 Nkd1Q99MH6 471 aa11.19□□□□□ -0.62
Ciita-201ENSMUST00000023147 Mzf1S4R1L6 814 aa11.19□□□□□ -0.62
Ciita-201ENSMUST00000023147 Prss40A6H6T1 365 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm8267E9Q207 261 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Hoxb8P09632 243 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Itga7Q61738 1179 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rrm2bQ6PEE3 351 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tdpoz4Q6YCH2 370 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ahcyl1Q80SW1 530 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Disc1Q811T9 852 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Cpa5Q8R4H4 436 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gtf2h3Q8VD76 309 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Mtif2Q91YJ5 727 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Polr3fQ921X6 316 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Wdsub1Q9D0I6 474 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm5114W4VSN8 858 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm8257E9Q8R3 264 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Akt1P31750 480 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rit2P70425 217 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 PrlrQ08501 608 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rrp36Q3UFY0 244 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Polr2eQ80UW8 210 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Usp6nlQ80XC3 819 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Baiap2l2Q80Y61 522 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Arhgef19Q8BWA8 802 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zhx2Q8C0C0 836 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Olfr474Q8VFC9 310 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Extl2Q9ES89 330 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 BcorQ8CGN4 1759 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zmym2Q9CU65 1376 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm5737A0A140LI11 423 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rhox3cA2AWM0 215 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm8113E0CXS8 587 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm3460E9QAI8 215 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rhox3hL7MU37 215 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Odc1P00860 461 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ccna2P51943 422 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rhox3aQ4TU90 215 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tmem270Q6UJB9 264 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 PolnQ7TQ07 864 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Pwp2Q8BU03 919 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 PygbQ8CI94 843 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Pcna-ps2A0A140T8V5 261 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Skint6A7XUZ6 1240 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Lonrf1D3YY23 762 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Unc5cO08747 931 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rrm2P11157 390 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Afg1lQ3V384 480 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 StilQ60988 1262 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 HltfQ6PCN7 1003 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zbtb39Q6PDK0 712 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Trim45Q6PFY8 580 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tas2r131Q7M708 310 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Slitrk1Q810C1 696 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tmem117Q8BH18 514 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zmym6Q8BS54 1249 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Snrnp27Q8K194 155 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Dync1li1Q8R1Q8 523 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Clptm1Q8VBZ3 664 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Agap3Q8VHH5 910 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Homer3Q99JP6 356 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Nsmce3Q9CPR8 279 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Josd2Q9CR30 188 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zfp655Q9CZP3 541 aaKnown RBP11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 LactbQ9EP89 551 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Hebp1Q9R257 190 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 Grk1Q9WVL4 564 aa11.18□□□□□ -0.62
Ciita-201ENSMUST00000023147 4930469K13RikA0A286YDB2 92 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tbc1d16A2ABG4 766 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Krt28A6BLY7 462 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Kcnj6P48542 425 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Myl2P51667 166 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Sfr1Q8BP27 319 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zbtb8bQ8CII0 484 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Stard7Q8R1R3 373 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 TbccQ8VCN9 341 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rnaseh2aQ9CWY8 301 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Inpp4aQ9EPW0 939 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Mrpl46Q9EQI8 283 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 GabrqQ9JLF1 638 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Acsl4Q9QUJ7 711 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm45208A0A140LJ36 292 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 MtrA6H5Y3 1253 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm3173A6NAS3 172 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm3020E9Q3J7 150 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Cyp2c68K7N6C2 491 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm2897K7N6T7 172 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 SarsP26638 512 aaKnown RBP11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ppp4r3cQ3V0Y1 813 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Dsg1aQ61495 1057 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Aldh1a2Q62148 518 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Peg10Q7TN75 958 aaKnown RBP11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Rbm12b1Q80YR9 836 aaKnown RBP11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 P2ry10Q8BFU7 328 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Thap3Q8BJ25 218 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Igdcc3Q8BQC3 813 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Catsper4Q8BVN3 442 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 ClmnQ8C5W0 1052 aa11.17□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm3411Q8C7R2 150 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms