RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C MHR1Q06630 226 aa5.86□□□□□ -1.47
SRP54YPR088C YAL065CO13511 128 aa5.85□□□□□ -1.47
SRP54YPR088C YNL190WP53872 204 aa5.85□□□□□ -1.47
SRP54YPR088C YDL241WQ07738 123 aa5.85□□□□□ -1.47
SRP54YPR088C YAL064WP39711 94 aa5.84□□□□□ -1.47
SRP54YPR088C RRT15Q3E811 62 aa5.84□□□□□ -1.47
SRP54YPR088C RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
SRP54YPR088C RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
SRP54YPR088C YBL081WP38180 368 aaKnown RBP5.82□□□□□ -1.48
SRP54YPR088C UIP3P39547 235 aa5.82□□□□□ -1.48
SRP54YPR088C CWP2P43497 92 aa5.82□□□□□ -1.48
SRP54YPR088C YKL023C-AQ2V2P3 75 aa5.82□□□□□ -1.48
SRP54YPR088C YER181CP40097 107 aa5.81□□□□□ -1.48
SRP54YPR088C YLR296WQ05898 108 aa5.81□□□□□ -1.48
SRP54YPR088C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SRP54YPR088C MBF1O14467 151 aaKnown RBP5.81□□□□□ -1.48
SRP54YPR088C CDC43P18898 376 aa5.81□□□□□ -1.48
SRP54YPR088C YAR023CD6VPM8 179 aa5.8□□□□□ -1.48
SRP54YPR088C PAI3P01094 68 aa5.8□□□□□ -1.48
SRP54YPR088C MID2P36027 376 aa5.8□□□□□ -1.48
SRP54YPR088C YPR170W-BP0C5R9 85 aa5.79□□□□□ -1.48
SRP54YPR088C UBC11P52492 156 aa5.78□□□□□ -1.48
SRP54YPR088C EOS1P53938 366 aa5.78□□□□□ -1.48
SRP54YPR088C YIL102C-AQ2V2P5 75 aa5.77□□□□□ -1.48
SRP54YPR088C YLL006W-AQ3E814 58 aa5.77□□□□□ -1.48
SRP54YPR088C POP7P38291 140 aa5.77□□□□□ -1.49
SRP54YPR088C YIA6P40556 373 aa5.76□□□□□ -1.49
SRP54YPR088C ABF2Q02486 183 aa5.76□□□□□ -1.49
SRP54YPR088C AQY2P0CD90 149 aa5.75□□□□□ -1.49
SRP54YPR088C SMD1Q02260 146 aaPredicted RBP5.75□□□□□ -1.49
SRP54YPR088C YPR195CQ06594 109 aa5.75□□□□□ -1.49
SRP54YPR088C YHR130CP38834 111 aa5.74□□□□□ -1.49
SRP54YPR088C MVB12P42939 101 aa5.74□□□□□ -1.49
SRP54YPR088C LSM6Q06406 86 aaKnown RBP5.74□□□□□ -1.49
SRP54YPR088C YOR020W-AQ3E824 90 aa5.74□□□□□ -1.49
SRP54YPR088C NHP2P32495 156 aaPredicted RBP5.74□□□□□ -1.49
SRP54YPR088C RGM1Q00453 211 aa5.74□□□□□ -1.49
SRP54YPR088C HPA2Q06592 156 aa5.74□□□□□ -1.49
SRP54YPR088C YBR182C-AQ8TGU6 64 aa5.74□□□□□ -1.49
SRP54YPR088C CPR1P14832 162 aaKnown RBP5.73□□□□□ -1.49
SRP54YPR088C YNL198CP40166 100 aa5.73□□□□□ -1.49
SRP54YPR088C SNA2P56508 79 aa5.73□□□□□ -1.49
SRP54YPR088C RPL29P05747 59 aaPredicted RBP5.72□□□□□ -1.49
SRP54YPR088C YFL019CP43576 117 aa5.72□□□□□ -1.49
SRP54YPR088C ANB1P19211 157 aa5.71□□□□□ -1.5
SRP54YPR088C YBL039W-BP0C268 59 aa5.7□□□□□ -1.5
SRP54YPR088C MET32Q12041 191 aa5.7□□□□□ -1.5
SRP54YPR088C MRP10O75012 95 aa5.7□□□□□ -1.5
SRP54YPR088C COX10P21592 462 aa5.7□□□□□ -1.5
SRP54YPR088C YDR029WQ12111 104 aa5.7□□□□□ -1.5
SRP54YPR088C HYP2P23301 157 aaKnown RBP5.69□□□□□ -1.5
SRP54YPR088C ARO2P28777 376 aaKnown RBP5.69□□□□□ -1.5
SRP54YPR088C AIM19P40502 157 aa5.68□□□□□ -1.5
SRP54YPR088C KNH1P50112 268 aa5.68□□□□□ -1.5
SRP54YPR088C YPL229WQ99395 206 aa5.68□□□□□ -1.5
SRP54YPR088C YDR034C-AP0C289 58 aa5.67□□□□□ -1.5
SRP54YPR088C YGL041C-BQ3E750 60 aa5.66□□□□□ -1.5
SRP54YPR088C IRC21Q04772 201 aa5.66□□□□□ -1.5
SRP54YPR088C MRPL24P36525 258 aaPredicted RBP5.65□□□□□ -1.51
SRP54YPR088C SMP1P38128 452 aa5.65□□□□□ -1.51
SRP54YPR088C ICY1Q04329 127 aa5.65□□□□□ -1.51
SRP54YPR088C Q0032Q9ZZX7 96 aa5.65□□□□□ -1.51
SRP54YPR088C UBC4P15731 148 aa5.64□□□□□ -1.51
SRP54YPR088C IGD1P43598 195 aa5.64□□□□□ -1.51
SRP54YPR088C HUR1P45820 110 aa5.64□□□□□ -1.51
SRP54YPR088C ECM12O13529 151 aa5.63□□□□□ -1.51
SRP54YPR088C PEX22P39718 180 aa5.63□□□□□ -1.51
SRP54YPR088C YNL162W-AQ3E7A8 72 aa5.63□□□□□ -1.51
SRP54YPR088C YOR034C-AQ3E735 80 aa5.63□□□□□ -1.51
SRP54YPR088C RPL26AP05743 127 aaKnown RBP5.61□□□□□ -1.51
SRP54YPR088C RPL26BP53221 127 aaKnown RBP5.61□□□□□ -1.51
SRP54YPR088C LCL2Q08045 131 aa5.6□□□□□ -1.51
SRP54YPR088C YLR236CA0A023PZG4 107 aa5.59□□□□□ -1.51
SRP54YPR088C GAT4P40569 121 aa5.59□□□□□ -1.51
SRP54YPR088C YLR307C-AQ3E825 87 aa5.59□□□□□ -1.51
SRP54YPR088C MSA2P36157 363 aa5.56□□□□□ -1.52
SRP54YPR088C YGL193CP53097 103 aa5.56□□□□□ -1.52
SRP54YPR088C YIL002W-AQ3E7Z5 69 aa5.56□□□□□ -1.52
SRP54YPR088C YBR230W-AQ3E762 66 aa5.55□□□□□ -1.52
SRP54YPR088C YNL042W-BQ3E7Z2 85 aa5.55□□□□□ -1.52
SRP54YPR088C FYV5P25585 152 aa5.54□□□□□ -1.52
SRP54YPR088C YJL127C-BQ3E828 52 aa5.54□□□□□ -1.52
SRP54YPR088C DSE2P38844 325 aa5.53□□□□□ -1.52
SRP54YPR088C MPC3P53311 146 aa5.53□□□□□ -1.52
SRP54YPR088C YPL257WQ08974 193 aa5.52□□□□□ -1.53
SRP54YPR088C SAP30P38429 201 aa5.52□□□□□ -1.53
SRP54YPR088C LCL1Q02786 101 aa5.52□□□□□ -1.53
SRP54YPR088C YER039C-AP0CD97 72 aa5.51□□□□□ -1.53
SRP54YPR088C MDN1Q12019 4910 aaKnown RBP5.5□□□□□ -1.53
SRP54YPR088C YJR107C-AP0CT86 78 aa5.49□□□□□ -1.53
SRP54YPR088C SPT4P32914 102 aaPredicted RBP5.49□□□□□ -1.53
SRP54YPR088C RPA12P32529 125 aaKnown RBP5.48□□□□□ -1.53
SRP54YPR088C SFT1P43682 97 aa5.48□□□□□ -1.53
SRP54YPR088C DDR2P89113 61 aa5.48□□□□□ -1.53
SRP54YPR088C YLR156WP0CE96 114 aa5.48□□□□□ -1.53
SRP54YPR088C YLR159WP0CE97 114 aa5.48□□□□□ -1.53
SRP54YPR088C YLR161WP0CE98 114 aa5.48□□□□□ -1.53
SRP54YPR088C OST2P46964 130 aa5.46□□□□□ -1.54
SRP54YPR088C BET1P22804 142 aa5.45□□□□□ -1.54
SRP54YPR088C GIS2P53849 153 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms