RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W YPS5P53057 165 aa2.99□□□□□ -1.93
CHL1YPL008W LSM6Q06406 86 aaKnown RBP2.99□□□□□ -1.93
CHL1YPL008W YCL021W-AQ96VH3 125 aa2.99□□□□□ -1.93
CHL1YPL008W ATP15P21306 62 aa2.99□□□□□ -1.93
CHL1YPL008W YNL198CP40166 100 aa2.99□□□□□ -1.93
CHL1YPL008W SFT1P43682 97 aa2.99□□□□□ -1.93
CHL1YPL008W YPR010C-AA5Z2X5 72 aa2.98□□□□□ -1.93
CHL1YPL008W NHP2P32495 156 aaPredicted RBP2.98□□□□□ -1.93
CHL1YPL008W ADH1P00330 348 aaKnown RBP2.98□□□□□ -1.93
CHL1YPL008W SBH1P52870 82 aa2.98□□□□□ -1.93
CHL1YPL008W YNR077CP53758 84 aa2.98□□□□□ -1.93
CHL1YPL008W COX12Q01519 83 aa2.98□□□□□ -1.93
CHL1YPL008W IRA2P19158 3079 aa2.97□□□□□ -1.93
CHL1YPL008W ARC15P40518 154 aaRIP-Chip data2.97□□□□□ -1.93not detected
CHL1YPL008W YMR122W-AQ3E842 84 aa2.97□□□□□ -1.93
CHL1YPL008W GCN1P33892 2672 aaKnown RBP2.97□□□□□ -1.93
CHL1YPL008W YBR209WP38311 105 aa2.97□□□□□ -1.93
CHL1YPL008W KRE9P39005 276 aa2.97□□□□□ -1.93
CHL1YPL008W YEL008WP40001 126 aa2.97□□□□□ -1.93
CHL1YPL008W YGR039WP53225 103 aa2.97□□□□□ -1.93
CHL1YPL008W VAM10Q08474 114 aa2.97□□□□□ -1.93
CHL1YPL008W CRC1Q12289 327 aa2.97□□□□□ -1.93
CHL1YPL008W YNL277W-AQ3E7Z0 62 aa2.97□□□□□ -1.93
CHL1YPL008W NRG2P38082 220 aa2.96□□□□□ -1.94
CHL1YPL008W YIL059CP40520 121 aa2.96□□□□□ -1.94
CHL1YPL008W SHH4Q06236 168 aa2.96□□□□□ -1.94
CHL1YPL008W YOR020W-AQ3E824 90 aa2.96□□□□□ -1.94
CHL1YPL008W COX10P21592 462 aa2.96□□□□□ -1.94
CHL1YPL008W YFR035CP43608 114 aa2.96□□□□□ -1.94
CHL1YPL008W SGF11Q03067 99 aa2.96□□□□□ -1.94
CHL1YPL008W ENV10Q99382 181 aa2.96□□□□□ -1.94
CHL1YPL008W YBL081WP38180 368 aaKnown RBP2.95□□□□□ -1.94
CHL1YPL008W YEL067CP39978 195 aa2.95□□□□□ -1.94
CHL1YPL008W YJR085CP47131 105 aaKnown RBP2.95□□□□□ -1.94
CHL1YPL008W MRPS12P53732 153 aa2.95□□□□□ -1.94
CHL1YPL008W YDL241WQ07738 123 aa2.95□□□□□ -1.94
CHL1YPL008W KTI11Q3E840 82 aa2.95□□□□□ -1.94
CHL1YPL008W YDL022C-AP0C5L6 82 aa2.95□□□□□ -1.94
CHL1YPL008W BPH1P25356 2167 aa2.95□□□□□ -1.94
CHL1YPL008W HPA2Q06592 156 aa2.94□□□□□ -1.94
CHL1YPL008W YMR175W-AQ3E766 64 aa2.94□□□□□ -1.94
CHL1YPL008W COX14P39103 70 aa2.94□□□□□ -1.94
CHL1YPL008W YIA6P40556 373 aa2.94□□□□□ -1.94
CHL1YPL008W YHR139C-AO13536 103 aa2.93□□□□□ -1.94
CHL1YPL008W INO4P13902 151 aa2.93□□□□□ -1.94
CHL1YPL008W SPC1P46965 94 aa2.93□□□□□ -1.94
CHL1YPL008W YLR281CQ05863 155 aa2.93□□□□□ -1.94
CHL1YPL008W RDS3Q06835 107 aaPredicted RBP2.93□□□□□ -1.94
CHL1YPL008W YLR412C-AQ3E742 68 aa2.93□□□□□ -1.94
CHL1YPL008W CDC43P18898 376 aa2.93□□□□□ -1.94
CHL1YPL008W ATX1P38636 73 aa2.93□□□□□ -1.94
CHL1YPL008W VTC1P40046 129 aaRIP-Chip data2.93□□□□□ -1.94not detected
CHL1YPL008W CWP2P43497 92 aa2.93□□□□□ -1.94
CHL1YPL008W YGL088WP53151 121 aa2.93□□□□□ -1.94
CHL1YPL008W YCR085WP25650 117 aa2.92□□□□□ -1.94
CHL1YPL008W SPT4P32914 102 aaPredicted RBP2.92□□□□□ -1.94
CHL1YPL008W YMR295CQ03559 197 aa2.92□□□□□ -1.94
CHL1YPL008W YCR001WP25347 104 aa2.91□□□□□ -1.94
CHL1YPL008W YFL065CP43539 102 aa2.91□□□□□ -1.94
CHL1YPL008W YGL034CP53186 121 aa2.91□□□□□ -1.94
CHL1YPL008W RGM1Q00453 211 aa2.91□□□□□ -1.94
CHL1YPL008W YPR203WQ08994 102 aa2.91□□□□□ -1.94
CHL1YPL008W YDR029WQ12111 104 aa2.91□□□□□ -1.94
CHL1YPL008W YER078W-AQ3E7A2 54 aa2.91□□□□□ -1.94
CHL1YPL008W RAD6P06104 172 aa2.9□□□□□ -1.94
CHL1YPL008W YCR043CP25361 127 aa2.9□□□□□ -1.94
CHL1YPL008W YRA2P36036 203 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
CHL1YPL008W RPC10P40422 70 aa2.9□□□□□ -1.94
CHL1YPL008W TRA1P38811 3744 aa2.9□□□□□ -1.95
CHL1YPL008W HUR1P45820 110 aa2.9□□□□□ -1.95
CHL1YPL008W URA2P07259 2214 aaKnown RBP2.89□□□□□ -1.95
CHL1YPL008W RPL33AP05744 107 aaKnown RBP2.89□□□□□ -1.95
CHL1YPL008W RPL29P05747 59 aaPredicted RBP2.89□□□□□ -1.95
CHL1YPL008W RPL33BP41056 107 aaKnown RBP2.89□□□□□ -1.95
CHL1YPL008W YNL190WP53872 204 aa2.89□□□□□ -1.95
CHL1YPL008W YLL006W-AQ3E814 58 aa2.89□□□□□ -1.95
CHL1YPL008W YAL065CO13511 128 aa2.88□□□□□ -1.95
CHL1YPL008W YBR219CP38317 127 aa2.88□□□□□ -1.95
CHL1YPL008W TSC3Q3E790 80 aa2.88□□□□□ -1.95
CHL1YPL008W HAL1Q01766 294 aa2.88□□□□□ -1.95
CHL1YPL008W RPL26AP05743 127 aaKnown RBP2.87□□□□□ -1.95
CHL1YPL008W RPA12P32529 125 aaKnown RBP2.87□□□□□ -1.95
CHL1YPL008W MID2P36027 376 aa2.87□□□□□ -1.95
CHL1YPL008W SVP26P38869 228 aa2.87□□□□□ -1.95
CHL1YPL008W RPL26BP53221 127 aaKnown RBP2.87□□□□□ -1.95
CHL1YPL008W ECM12O13529 151 aa2.87□□□□□ -1.95
CHL1YPL008W ICY1Q04329 127 aa2.87□□□□□ -1.95
CHL1YPL008W YAL063C-AQ3E791 96 aa2.87□□□□□ -1.95
CHL1YPL008W RTC6O14464 93 aa2.86□□□□□ -1.95
CHL1YPL008W YBL039W-BP0C268 59 aa2.86□□□□□ -1.95
CHL1YPL008W AIM19P40502 157 aa2.86□□□□□ -1.95
CHL1YPL008W GAT4P40569 121 aa2.86□□□□□ -1.95
CHL1YPL008W PRP8P33334 2413 aaKnown RBP2.86□□□□□ -1.95
CHL1YPL008W YLR236CA0A023PZG4 107 aa2.86□□□□□ -1.95
CHL1YPL008W MSA2P36157 363 aa2.86□□□□□ -1.95
CHL1YPL008W KNH1P50112 268 aa2.86□□□□□ -1.95
CHL1YPL008W KSH1Q8TGJ3 72 aa2.86□□□□□ -1.95
CHL1YPL008W AQY2P0CD90 149 aa2.85□□□□□ -1.95
CHL1YPL008W MVB12P42939 101 aa2.85□□□□□ -1.95
CHL1YPL008W YFL019CP43576 117 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms