RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C TOA2P32774 122 aa5.53□□□□□ -1.52
RUP1YOR138C MRPL24P36525 258 aaPredicted RBP5.53□□□□□ -1.52
RUP1YOR138C ARC15P40518 154 aaRIP-Chip data5.53□□□□□ -1.52not detected
RUP1YOR138C YOR034C-AQ3E735 80 aa5.53□□□□□ -1.52
RUP1YOR138C RPB9P27999 122 aa5.53□□□□□ -1.52
RUP1YOR138C YPS5P53057 165 aa5.53□□□□□ -1.52
RUP1YOR138C YFL041W-AQ3E817 63 aa5.53□□□□□ -1.52
RUP1YOR138C KRE9P39005 276 aa5.52□□□□□ -1.53
RUP1YOR138C YBL112CQ3E7Y4 105 aa5.52□□□□□ -1.53
RUP1YOR138C KRE1P17260 313 aa5.52□□□□□ -1.53
RUP1YOR138C CWP2P43497 92 aa5.52□□□□□ -1.53
RUP1YOR138C RGM1Q00453 211 aa5.52□□□□□ -1.53
RUP1YOR138C YHR212W-AP0CX91 67 aa5.51□□□□□ -1.53
RUP1YOR138C YBR219CP38317 127 aa5.51□□□□□ -1.53
RUP1YOR138C YGR039WP53225 103 aa5.51□□□□□ -1.53
RUP1YOR138C YHR139C-AO13536 103 aa5.5□□□□□ -1.53
RUP1YOR138C COX14P39103 70 aa5.5□□□□□ -1.53
RUP1YOR138C MRP10O75012 95 aa5.5□□□□□ -1.53
RUP1YOR138C SVP26P38869 228 aa5.5□□□□□ -1.53
RUP1YOR138C VAM10Q08474 114 aa5.5□□□□□ -1.53
RUP1YOR138C HAL1Q01766 294 aa5.49□□□□□ -1.53
RUP1YOR138C YER145C-AA0A023PYF4 145 aa5.48□□□□□ -1.53
RUP1YOR138C YAR029WP39549 74 aa5.48□□□□□ -1.53
RUP1YOR138C RPR2P40571 144 aa5.48□□□□□ -1.53
RUP1YOR138C YLL006W-AQ3E814 58 aa5.48□□□□□ -1.53
RUP1YOR138C YCR001WP25347 104 aa5.48□□□□□ -1.53
RUP1YOR138C YDL186WP48568 277 aa5.48□□□□□ -1.53
RUP1YOR138C YDR381C-AQ3E6R5 114 aa5.48□□□□□ -1.53
RUP1YOR138C MEC1P38111 2368 aa5.47□□□□□ -1.53
RUP1YOR138C MPC2P38857 129 aa5.47□□□□□ -1.53
RUP1YOR138C UBC11P52492 156 aa5.47□□□□□ -1.53
RUP1YOR138C YOR020W-AQ3E824 90 aa5.47□□□□□ -1.53
RUP1YOR138C COF1Q03048 143 aaKnown RBP5.46□□□□□ -1.54
RUP1YOR138C MSA2P36157 363 aa5.45□□□□□ -1.54
RUP1YOR138C COX12Q01519 83 aa5.45□□□□□ -1.54
RUP1YOR138C YMR122W-AQ3E842 84 aa5.45□□□□□ -1.54
RUP1YOR138C YBR126W-AQ8TGU7 68 aa5.45□□□□□ -1.54
RUP1YOR138C ENV10Q99382 181 aa5.44□□□□□ -1.54
RUP1YOR138C RAD6P06104 172 aa5.43□□□□□ -1.54
RUP1YOR138C RPL43AP0CX25 92 aaKnown RBP5.43□□□□□ -1.54
RUP1YOR138C RPL43BP0CX26 92 aa5.43□□□□□ -1.54
RUP1YOR138C SMP1P38128 452 aa5.43□□□□□ -1.54
RUP1YOR138C YPL080CQ02826 108 aa5.43□□□□□ -1.54
RUP1YOR138C EMC6Q12431 108 aa5.43□□□□□ -1.54
RUP1YOR138C YDR119W-AQ2V2P9 66 aa5.43□□□□□ -1.54
RUP1YOR138C YBR144CP34215 104 aa5.42□□□□□ -1.54
RUP1YOR138C YJR107C-AP0CT86 78 aa5.41□□□□□ -1.54
RUP1YOR138C KNH1P50112 268 aa5.41□□□□□ -1.54
RUP1YOR138C IRC21Q04772 201 aa5.41□□□□□ -1.54
RUP1YOR138C YGR240C-AQ3E786 66 aa5.41□□□□□ -1.54
RUP1YOR138C YLR236CA0A023PZG4 107 aa5.41□□□□□ -1.54
RUP1YOR138C MPC3P53311 146 aa5.41□□□□□ -1.54
RUP1YOR138C YDR274CP87283 123 aa5.41□□□□□ -1.54
RUP1YOR138C YHL042WP38729 150 aa5.4□□□□□ -1.54
RUP1YOR138C ERI1P62651 68 aaKnown RBP5.4□□□□□ -1.54
RUP1YOR138C YAL065CO13511 128 aa5.4□□□□□ -1.55
RUP1YOR138C CRC1Q12289 327 aa5.4□□□□□ -1.55
RUP1YOR138C SMD1Q02260 146 aaPredicted RBP5.39□□□□□ -1.55
RUP1YOR138C YDR029WQ12111 104 aa5.39□□□□□ -1.55
RUP1YOR138C YMR175W-AQ3E766 64 aa5.37□□□□□ -1.55
RUP1YOR138C ICY1Q04329 127 aa5.36□□□□□ -1.55
RUP1YOR138C YHL018WP38744 120 aaPredicted RBP5.35□□□□□ -1.55
RUP1YOR138C ERG28P40030 148 aa5.35□□□□□ -1.55
RUP1YOR138C EDC1P53080 175 aaPredicted RBP5.35□□□□□ -1.55
RUP1YOR138C YAL064WP39711 94 aa5.35□□□□□ -1.55
RUP1YOR138C MVB12P42939 101 aa5.35□□□□□ -1.55
RUP1YOR138C ATP18P81450 59 aa5.35□□□□□ -1.55
RUP1YOR138C YMR320WQ04897 101 aa5.35□□□□□ -1.55
RUP1YOR138C YLR285C-AQ3E771 56 aa5.35□□□□□ -1.55
RUP1YOR138C YGR035W-AQ45U48 73 aa5.35□□□□□ -1.55
RUP1YOR138C YSY6P38374 65 aa5.34□□□□□ -1.55
RUP1YOR138C YLR281CQ05863 155 aa5.34□□□□□ -1.55
RUP1YOR138C RPL11AP0C0W9 174 aaKnown RBP5.33□□□□□ -1.56
RUP1YOR138C RPL11BQ3E757 174 aaPredicted RBP5.33□□□□□ -1.56
RUP1YOR138C YPL038W-AQ3E7B4 63 aa5.33□□□□□ -1.56
RUP1YOR138C SGF11Q03067 99 aa5.33□□□□□ -1.56
RUP1YOR138C SHH4Q06236 168 aa5.33□□□□□ -1.56
RUP1YOR138C YIR021W-AQ3E739 70 aa5.33□□□□□ -1.56
RUP1YOR138C AQY2P0CD90 149 aa5.32□□□□□ -1.56
RUP1YOR138C YBL081WP38180 368 aaKnown RBP5.32□□□□□ -1.56
RUP1YOR138C RPL38P49167 78 aaKnown RBP5.32□□□□□ -1.56
RUP1YOR138C YDL241WQ07738 123 aa5.32□□□□□ -1.56
RUP1YOR138C RPL29P05747 59 aaPredicted RBP5.31□□□□□ -1.56
RUP1YOR138C RPC10P40422 70 aa5.31□□□□□ -1.56
RUP1YOR138C DIF1O13577 133 aa5.31□□□□□ -1.56
RUP1YOR138C TSC3Q3E790 80 aa5.31□□□□□ -1.56
RUP1YOR138C UTP20P35194 2493 aaKnown RBP5.31□□□□□ -1.56
RUP1YOR138C ECM12O13529 151 aa5.3□□□□□ -1.56
RUP1YOR138C YLR415CO13578 112 aa5.3□□□□□ -1.56
RUP1YOR138C STF1P01098 86 aa5.3□□□□□ -1.56
RUP1YOR138C YLR156WP0CE96 114 aa5.3□□□□□ -1.56
RUP1YOR138C YLR159WP0CE97 114 aa5.3□□□□□ -1.56
RUP1YOR138C YLR161WP0CE98 114 aa5.3□□□□□ -1.56
RUP1YOR138C YFL019CP43576 117 aa5.3□□□□□ -1.56
RUP1YOR138C RDS3Q06835 107 aaPredicted RBP5.29□□□□□ -1.56
RUP1YOR138C YPR010C-AA5Z2X5 72 aa5.28□□□□□ -1.56
RUP1YOR138C RPL33AP05744 107 aaKnown RBP5.28□□□□□ -1.56
RUP1YOR138C YBL039W-BP0C268 59 aa5.28□□□□□ -1.56
RUP1YOR138C YFR009W-AP0C5M9 85 aa5.28□□□□□ -1.56
RUP1YOR138C RPL33BP41056 107 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms