RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W MRPS8Q03799 155 aa2.4□□□□□ -2.03
VPS17YOR132W MRPL38P35996 138 aaPredicted RBP2.39□□□□□ -2.03
VPS17YOR132W AIM11P87275 137 aa2.39□□□□□ -2.03
VPS17YOR132W YLR342W-AQ3E810 57 aa2.39□□□□□ -2.03
VPS17YOR132W RAD6P06104 172 aa2.38□□□□□ -2.03
VPS17YOR132W YDR042CQ03205 200 aa2.38□□□□□ -2.03
VPS17YOR132W PRM7Q12459 698 aa2.38□□□□□ -2.03
VPS17YOR132W TEL1P38110 2787 aa2.38□□□□□ -2.03
VPS17YOR132W DDR48P18899 430 aaKnown RBP2.37□□□□□ -2.03
VPS17YOR132W SPI1P40092 148 aa2.37□□□□□ -2.03
VPS17YOR132W YNL198CP40166 100 aa2.37□□□□□ -2.03
VPS17YOR132W MGR2Q02889 113 aa2.37□□□□□ -2.03
VPS17YOR132W GPI19Q04082 140 aa2.37□□□□□ -2.03
VPS17YOR132W YLR363W-AQ3E747 85 aa2.37□□□□□ -2.03
VPS17YOR132W YDL022C-AP0C5L6 82 aa2.37□□□□□ -2.03
VPS17YOR132W YER039C-AP0CD97 72 aa2.37□□□□□ -2.03
VPS17YOR132W YMR295CQ03559 197 aa2.37□□□□□ -2.03
VPS17YOR132W YMR103CQ04436 120 aa2.37□□□□□ -2.03
VPS17YOR132W YEL067CP39978 195 aa2.36□□□□□ -2.03
VPS17YOR132W YER135CP40082 130 aa2.36□□□□□ -2.03
VPS17YOR132W YIR020CP40575 100 aa2.36□□□□□ -2.03
VPS17YOR132W PFY1P07274 126 aa2.35□□□□□ -2.03
VPS17YOR132W YKL044WP36092 106 aa2.35□□□□□ -2.03
VPS17YOR132W SNF11P38956 169 aa2.35□□□□□ -2.03
VPS17YOR132W POR2P40478 281 aa2.35□□□□□ -2.03
VPS17YOR132W YNR077CP53758 84 aa2.35□□□□□ -2.03
VPS17YOR132W ELC1Q03071 99 aa2.35□□□□□ -2.03
VPS17YOR132W YPR013CQ12145 317 aa2.35□□□□□ -2.03
VPS17YOR132W COA3Q3E7B2 85 aa2.35□□□□□ -2.03
VPS17YOR132W HMRA2P0CY13 119 aa2.34□□□□□ -2.03
VPS17YOR132W YLR042CQ07990 161 aa2.34□□□□□ -2.03
VPS17YOR132W YIL102C-AQ2V2P5 75 aa2.34□□□□□ -2.03
VPS17YOR132W PAI3P01094 68 aa2.34□□□□□ -2.04
VPS17YOR132W YNL217WP40152 326 aa2.34□□□□□ -2.04
VPS17YOR132W GAT4P40569 121 aa2.34□□□□□ -2.04
VPS17YOR132W TOS6P48560 102 aa2.34□□□□□ -2.04
VPS17YOR132W LIP1Q03579 150 aa2.34□□□□□ -2.04
VPS17YOR132W YML079WQ03629 201 aa2.34□□□□□ -2.04
VPS17YOR132W YLR296WQ05898 108 aa2.34□□□□□ -2.04
VPS17YOR132W YOR381W-AQ3E804 55 aa2.34□□□□□ -2.04
VPS17YOR132W YHR022CP38763 256 aa2.33□□□□□ -2.04
VPS17YOR132W YPL261CQ08976 102 aa2.33□□□□□ -2.04
VPS17YOR132W ANB1P19211 157 aa2.32□□□□□ -2.04
VPS17YOR132W HYP2P23301 157 aaKnown RBP2.32□□□□□ -2.04
VPS17YOR132W YCR050CP25630 102 aa2.32□□□□□ -2.04
VPS17YOR132W YKL023C-AQ2V2P3 75 aa2.32□□□□□ -2.04
VPS17YOR132W YBR200W-AQ3E755 54 aa2.32□□□□□ -2.04
VPS17YOR132W BPH1P25356 2167 aa2.32□□□□□ -2.04
VPS17YOR132W VAR1P02381 398 aa2.31□□□□□ -2.04
VPS17YOR132W YPR195CQ06594 109 aa2.31□□□□□ -2.04
VPS17YOR132W CCW12Q12127 133 aa2.31□□□□□ -2.04
VPS17YOR132W YOR011W-AQ3E807 68 aa2.31□□□□□ -2.04
VPS17YOR132W KTI11Q3E840 82 aa2.31□□□□□ -2.04
VPS17YOR132W RPL33BP41056 107 aaKnown RBP2.31□□□□□ -2.04
VPS17YOR132W DCV1P43595 202 aa2.31□□□□□ -2.04
VPS17YOR132W YFR035CP43608 114 aa2.31□□□□□ -2.04
VPS17YOR132W YJR146WP47174 117 aa2.31□□□□□ -2.04
VPS17YOR132W YOR097CQ12274 175 aaPredicted RBP2.31□□□□□ -2.04
VPS17YOR132W YOR008C-AQ3E7B9 74 aa2.31□□□□□ -2.04
VPS17YOR132W YNL146C-AQ3E7Z1 64 aa2.31□□□□□ -2.04
VPS17YOR132W YAL064WP39711 94 aa2.3□□□□□ -2.04
VPS17YOR132W VPS55P47111 140 aa2.3□□□□□ -2.04
VPS17YOR132W Q0297Q9ZZV8 51 aa2.3□□□□□ -2.04
VPS17YOR132W URA2P07259 2214 aaKnown RBP2.29□□□□□ -2.04
VPS17YOR132W YAR029WP39549 74 aa2.29□□□□□ -2.04
VPS17YOR132W SPG1P50088 95 aa2.29□□□□□ -2.04
VPS17YOR132W MRPS12P53732 153 aa2.29□□□□□ -2.04
VPS17YOR132W HOR7Q05827 59 aa2.29□□□□□ -2.04
VPS17YOR132W PRM3Q08931 133 aa2.29□□□□□ -2.04
VPS17YOR132W YOR376W-AQ3E805 51 aa2.29□□□□□ -2.04
VPS17YOR132W TAR1Q8TGM6 124 aa2.29□□□□□ -2.04
VPS17YOR132W PRP8P33334 2413 aaKnown RBP2.29□□□□□ -2.04
VPS17YOR132W YHL042WP38729 150 aa2.28□□□□□ -2.04
VPS17YOR132W YIL059CP40520 121 aa2.28□□□□□ -2.04
VPS17YOR132W YNL190WP53872 204 aa2.28□□□□□ -2.04
VPS17YOR132W YLR194CQ05777 254 aa2.28□□□□□ -2.04
VPS17YOR132W YDL241WQ07738 123 aa2.28□□□□□ -2.04
VPS17YOR132W YLR236CA0A023PZG4 107 aa2.28□□□□□ -2.05
VPS17YOR132W INO4P13902 151 aa2.28□□□□□ -2.05
VPS17YOR132W LSM6Q06406 86 aaKnown RBP2.28□□□□□ -2.05
VPS17YOR132W NHP2P32495 156 aaPredicted RBP2.27□□□□□ -2.05
VPS17YOR132W MEC1P38111 2368 aa2.27□□□□□ -2.05
VPS17YOR132W CCW14O13547 238 aa2.26□□□□□ -2.05
VPS17YOR132W RPL26AP05743 127 aaKnown RBP2.26□□□□□ -2.05
VPS17YOR132W YEL008WP40001 126 aa2.26□□□□□ -2.05
VPS17YOR132W RPL26BP53221 127 aaKnown RBP2.26□□□□□ -2.05
VPS17YOR132W KRE1P17260 313 aa2.25□□□□□ -2.05
VPS17YOR132W RPA12P32529 125 aaKnown RBP2.25□□□□□ -2.05
VPS17YOR132W YBR209WP38311 105 aa2.25□□□□□ -2.05
VPS17YOR132W HPA2Q06592 156 aa2.25□□□□□ -2.05
VPS17YOR132W ATX1P38636 73 aa2.25□□□□□ -2.05
VPS17YOR132W SHU1P38751 150 aa2.25□□□□□ -2.05
VPS17YOR132W DSE2P38844 325 aa2.25□□□□□ -2.05
VPS17YOR132W UBC5P15732 148 aa2.24□□□□□ -2.05
VPS17YOR132W SOM1Q05676 74 aa2.24□□□□□ -2.05
VPS17YOR132W RDS3Q06835 107 aaPredicted RBP2.24□□□□□ -2.05
VPS17YOR132W RPL43AP0CX25 92 aaKnown RBP2.23□□□□□ -2.05
VPS17YOR132W RPL43BP0CX26 92 aa2.23□□□□□ -2.05
VPS17YOR132W RPS11AP0CX47 156 aaKnown RBP2.23□□□□□ -2.05
VPS17YOR132W RPS11BP0CX48 156 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms