RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YKL023C-A	Q2V2P3	75 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YCR075W-A	Q3E830	75 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	IGO2	Q9P305	131 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YEL008W	P40001	126 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	PEX17	P40155	199 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	YGL088W	P53151	121 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	COX12	Q01519	83 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	YLR194C	Q05777	254 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	YLR296W	Q05898	108 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	YPL257W	Q08974	193 aa		2.46	□□□□□ -2.02
TPM1	YNL079C	PAI3	P01094	68 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	VTC1	P40046	129 aa	RIP-Chip data	2.45	□□□□□ -2.02	not detected
TPM1	YNL079C	YER181C	P40097	107 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	YNL198C	P40166	100 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	ARC15	P40518	154 aa	RIP-Chip data	2.45	□□□□□ -2.02	not detected
TPM1	YNL079C	YIL059C	P40520	121 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	YIL102C-A	Q2V2P5	75 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	YGR240C-A	Q3E786	66 aa		2.45	□□□□□ -2.02
TPM1	YNL079C	YCR001W	P25347	104 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	SHU1	P38751	150 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	EDC2	P40023	145 aa	Predicted RBP	2.44	□□□□□ -2.02
TPM1	YNL079C	YER085C	P40058	173 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	MRPS12	P53732	153 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	VAM10	Q08474	114 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	YMR122W-A	Q3E842	84 aa		2.44	□□□□□ -2.02
TPM1	YNL079C	RPL28	P02406	149 aa	Known RBP	2.43	□□□□□ -2.02
TPM1	YNL079C	ANB1	P19211	157 aa		2.43	□□□□□ -2.02
TPM1	YNL079C	UGX2	P32772	223 aa		2.43	□□□□□ -2.02
TPM1	YNL079C	NRG2	P38082	220 aa		2.43	□□□□□ -2.02
TPM1	YNL079C	YAR029W	P39549	74 aa		2.43	□□□□□ -2.02
TPM1	YNL079C	ERI1	P62651	68 aa	Known RBP	2.43	□□□□□ -2.02
TPM1	YNL079C	YAL063C-A	Q3E791	96 aa		2.43	□□□□□ -2.02
TPM1	YNL079C	QCR8	P08525	94 aa		2.42	□□□□□ -2.02
TPM1	YNL079C	HYP2	P23301	157 aa	Known RBP	2.42	□□□□□ -2.02
TPM1	YNL079C	YNL190W	P53872	204 aa		2.42	□□□□□ -2.02
TPM1	YNL079C	SGF11	Q03067	99 aa		2.42	□□□□□ -2.02
TPM1	YNL079C	YMR295C	Q03559	197 aa		2.42	□□□□□ -2.02
TPM1	YNL079C	LSM6	Q06406	86 aa	Known RBP	2.42	□□□□□ -2.02
TPM1	YNL079C	SLO1	Q3E784	85 aa		2.42	□□□□□ -2.02
TPM1	YNL079C	YBR219C	P38317	127 aa		2.41	□□□□□ -2.02
TPM1	YNL079C	UTP20	P35194	2493 aa	Known RBP	2.41	□□□□□ -2.02
TPM1	YNL079C	NHP2	P32495	156 aa	Predicted RBP	2.4	□□□□□ -2.03
TPM1	YNL079C	ERG28	P40030	148 aa		2.4	□□□□□ -2.03
TPM1	YNL079C	RDS3	Q06835	107 aa	Predicted RBP	2.4	□□□□□ -2.03
TPM1	YNL079C	ENV10	Q99382	181 aa		2.4	□□□□□ -2.03
TPM1	YNL079C	YPR010C-A	A5Z2X5	72 aa		2.39	□□□□□ -2.03
TPM1	YNL079C	SPT4	P32914	102 aa	Predicted RBP	2.39	□□□□□ -2.03
TPM1	YNL079C	YHR130C	P38834	111 aa		2.39	□□□□□ -2.03
TPM1	YNL079C	CWP2	P43497	92 aa		2.39	□□□□□ -2.03
TPM1	YNL079C	YOR304C-A	O14468	76 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	RPL33A	P05744	107 aa	Known RBP	2.38	□□□□□ -2.03
TPM1	YNL079C	AUA1	P32450	94 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	YIA6	P40556	373 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	RPL33B	P41056	107 aa	Known RBP	2.38	□□□□□ -2.03
TPM1	YNL079C	YAR1	P46683	200 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	SPC1	P46965	94 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	YMR320W	Q04897	101 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	YMR175W-A	Q3E766	64 aa		2.38	□□□□□ -2.03
TPM1	YNL079C	DYN1	P36022	4092 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	YAL065C	O13511	128 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	RPC10	P40422	70 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	RGM1	Q00453	211 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	YDL241W	Q07738	123 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	YIR021W-A	Q3E739	70 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	YLL006W-A	Q3E814	58 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	YOR020W-A	Q3E824	90 aa		2.37	□□□□□ -2.03
TPM1	YNL079C	HPA2	Q06592	156 aa		2.36	□□□□□ -2.03
TPM1	YNL079C	YLL066W-B	Q8TGJ7	56 aa		2.36	□□□□□ -2.03
TPM1	YNL079C	RTC6	O14464	93 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.35	□□□□□ -2.03	not detected
TPM1	YNL079C	MRPL24	P36525	258 aa	Predicted RBP	2.35	□□□□□ -2.03
TPM1	YNL079C	YBL081W	P38180	368 aa	Known RBP	2.35	□□□□□ -2.03
TPM1	YNL079C	SVP26	P38869	228 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	YAL064W	P39711	94 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	HUR1	P45820	110 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	YJL144W	P47009	104 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	YNL184C	P53876	108 aa		2.35	□□□□□ -2.03
TPM1	YNL079C	RPL29	P05747	59 aa	Predicted RBP	2.34	□□□□□ -2.03
TPM1	YNL079C	RPA12	P32529	125 aa	Known RBP	2.34	□□□□□ -2.03
TPM1	YNL079C	DSE2	P38844	325 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	MVB12	P42939	101 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	OST2	P46964	130 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	KNH1	P50112	268 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	ABF2	Q02486	183 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	RRT15	Q3E811	62 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	YPL229W	Q99395	206 aa		2.34	□□□□□ -2.03
TPM1	YNL079C	YLR236C	A0A023PZG4	107 aa		2.33	□□□□□ -2.04
TPM1	YNL079C	AQY2	P0CD90	149 aa		2.33	□□□□□ -2.04
TPM1	YNL079C	ATX1	P38636	73 aa		2.33	□□□□□ -2.04
TPM1	YNL079C	IRC21	Q04772	201 aa		2.33	□□□□□ -2.04
TPM1	YNL079C	YOR034C-A	Q3E735	80 aa		2.33	□□□□□ -2.04
TPM1	YNL079C	YBL039W-B	P0C268	59 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	INO4	P13902	151 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	AIM19	P40502	157 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	YFL019C	P43576	117 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	ICY1	Q04329	127 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	ISD11	Q6Q560	94 aa		2.32	□□□□□ -2.04
TPM1	YNL079C	YAR023C	D6VPM8	179 aa		2.31	□□□□□ -2.04
TPM1	YNL079C	KRE1	P17260	313 aa		2.31	□□□□□ -2.04
TPM1	YNL079C	MSA2	P36157	363 aa		2.31	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms