RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YMR007WQ03675 126 aa2.07□□□□□ -2.08
CUS1YMR240C IRC21Q04772 201 aa2.07□□□□□ -2.08
CUS1YMR240C PAU16P35994 123 aa2.06□□□□□ -2.08
CUS1YMR240C YHL005CP38752 130 aa2.06□□□□□ -2.08
CUS1YMR240C PAU15P40585 124 aa2.06□□□□□ -2.08
CUS1YMR240C YMR082CQ04276 118 aa2.06□□□□□ -2.08
CUS1YMR240C SUS1Q6WNK7 96 aa2.06□□□□□ -2.08
CUS1YMR240C ECM12O13529 151 aa2.05□□□□□ -2.08
CUS1YMR240C RPL22AP05749 121 aaKnown RBP2.05□□□□□ -2.08
CUS1YMR240C YHL037CP38733 133 aa2.05□□□□□ -2.08
CUS1YMR240C COA4Q05809 96 aa2.05□□□□□ -2.08
CUS1YMR240C HMRA1P0CY11 126 aa2.04□□□□□ -2.08
CUS1YMR240C SEN15Q04675 128 aa2.04□□□□□ -2.08
CUS1YMR240C CYB5P40312 120 aa2.03□□□□□ -2.08
CUS1YMR240C YMR321CQ04898 105 aa2.03□□□□□ -2.08
CUS1YMR240C PRM3Q08931 133 aa2.03□□□□□ -2.08
CUS1YMR240C YCL048W-AQ2V2Q2 79 aa2.03□□□□□ -2.08
CUS1YMR240C YSF3P0C074 85 aaPredicted RBP2.02□□□□□ -2.09
CUS1YMR240C HMRA2P0CY13 119 aa2.02□□□□□ -2.09
CUS1YMR240C YIL163CP40448 117 aa2.02□□□□□ -2.09
CUS1YMR240C YLR285C-AQ3E771 56 aa2.02□□□□□ -2.09
CUS1YMR240C YDR042CQ03205 200 aa2.01□□□□□ -2.09
CUS1YMR240C AIM4P38305 123 aaPredicted RBP2□□□□□ -2.09
CUS1YMR240C GCV3P39726 170 aaPredicted RBP2□□□□□ -2.09
CUS1YMR240C YJL009WP47078 108 aa2□□□□□ -2.09
CUS1YMR240C LSM6Q06406 86 aaKnown RBP2□□□□□ -2.09
CUS1YMR240C STT4P37297 1900 aa2□□□□□ -2.09
CUS1YMR240C RSM18P40033 138 aa1.99□□□□□ -2.09
CUS1YMR240C ICS3P47034 131 aa1.99□□□□□ -2.09
CUS1YMR240C RRT15Q3E811 62 aa1.99□□□□□ -2.09
CUS1YMR240C HUA1P40325 198 aa1.98□□□□□ -2.09
CUS1YMR240C YGL041C-BQ3E750 60 aa1.98□□□□□ -2.09
CUS1YMR240C TOM1Q03280 3268 aa1.98□□□□□ -2.09
CUS1YMR240C SLH1P53327 1967 aaKnown RBP1.98□□□□□ -2.09
CUS1YMR240C ROX3P25046 220 aa1.97□□□□□ -2.09
CUS1YMR240C PAU5P43575 122 aa1.97□□□□□ -2.09
CUS1YMR240C VPS55P47111 140 aa1.97□□□□□ -2.09
CUS1YMR240C YNL122CP53921 115 aaPredicted RBP1.97□□□□□ -2.09
CUS1YMR240C YOL118CQ08259 102 aa1.97□□□□□ -2.09
CUS1YMR240C LCL2Q08045 131 aa1.96□□□□□ -2.1
CUS1YMR240C YCR095W-AQ3E787 52 aa1.96□□□□□ -2.1
CUS1YMR240C ENV10Q99382 181 aa1.96□□□□□ -2.1
CUS1YMR240C CCW12Q12127 133 aa1.95□□□□□ -2.1
CUS1YMR240C CDC39P25655 2108 aaKnown RBP1.95□□□□□ -2.1
CUS1YMR240C RPS22AP0C0W1 130 aaKnown RBP1.94□□□□□ -2.1
CUS1YMR240C IMP2P46972 177 aa1.94□□□□□ -2.1
CUS1YMR240C SNA2P56508 79 aa1.94□□□□□ -2.1
CUS1YMR240C ICY1Q04329 127 aa1.94□□□□□ -2.1
CUS1YMR240C YOR072WQ08486 104 aa1.94□□□□□ -2.1
CUS1YMR240C CCW14O13547 238 aa1.93□□□□□ -2.1
CUS1YMR240C YAR064WP39563 99 aa1.93□□□□□ -2.1
CUS1YMR240C MIC27P50945 234 aa1.93□□□□□ -2.1
CUS1YMR240C YMR175W-AQ3E766 64 aa1.93□□□□□ -2.1
CUS1YMR240C YCR085WP25650 117 aa1.92□□□□□ -2.1
CUS1YMR240C RPA12P32529 125 aaKnown RBP1.92□□□□□ -2.1
CUS1YMR240C YBR013CP38215 129 aa1.92□□□□□ -2.1
CUS1YMR240C CWP2P43497 92 aa1.92□□□□□ -2.1
CUS1YMR240C RPL37AP49166 88 aaKnown RBP1.92□□□□□ -2.1
CUS1YMR240C MHF2Q3E829 80 aa1.92□□□□□ -2.1
CUS1YMR240C YGR240C-AQ3E786 66 aa1.91□□□□□ -2.1
CUS1YMR240C MRPL31P14063 131 aaPredicted RBP1.91□□□□□ -2.1
CUS1YMR240C BRR2P32639 2163 aaKnown RBP1.9□□□□□ -2.11
CUS1YMR240C YCR001WP25347 104 aa1.9□□□□□ -2.11
CUS1YMR240C YIL102CP40488 101 aa1.9□□□□□ -2.11
CUS1YMR240C COX12Q01519 83 aa1.9□□□□□ -2.11
CUS1YMR240C YPL038W-AQ3E7B4 63 aa1.9□□□□□ -2.11
CUS1YMR240C RPS22BQ3E7Y3 130 aaKnown RBP1.9□□□□□ -2.11
CUS1YMR240C VPS13Q07878 3144 aa1.89□□□□□ -2.11
CUS1YMR240C MRP17P28778 131 aa1.89□□□□□ -2.11
CUS1YMR240C HFA1P32874 2273 aa1.88□□□□□ -2.11
CUS1YMR240C TOM6P33448 61 aa1.88□□□□□ -2.11
CUS1YMR240C MRPL38P35996 138 aaPredicted RBP1.88□□□□□ -2.11
CUS1YMR240C MRPS12P53732 153 aa1.88□□□□□ -2.11
CUS1YMR240C MGR2Q02889 113 aa1.88□□□□□ -2.11
CUS1YMR240C SMX2P40204 77 aaKnown RBP1.87□□□□□ -2.11
CUS1YMR240C SPC1P46965 94 aa1.87□□□□□ -2.11
CUS1YMR240C YHR213W-AQ8TGT4 77 aa1.87□□□□□ -2.11
CUS1YMR240C PAU6P0CE90 120 aa1.86□□□□□ -2.11
CUS1YMR240C PAU18P0CE91 120 aa1.86□□□□□ -2.11
CUS1YMR240C NHP2P32495 156 aaPredicted RBP1.86□□□□□ -2.11
CUS1YMR240C YBL071CP38185 102 aa1.86□□□□□ -2.11
CUS1YMR240C YBR032WP38223 100 aa1.86□□□□□ -2.11
CUS1YMR240C AIM19P40502 157 aa1.86□□□□□ -2.11
CUS1YMR240C YDR210WQ03482 75 aa1.86□□□□□ -2.11
CUS1YMR240C POC4Q12245 148 aaPredicted RBP1.86□□□□□ -2.11
CUS1YMR240C MRX7P53869 86 aa1.85□□□□□ -2.11
CUS1YMR240C YOR343CQ12484 108 aa1.85□□□□□ -2.11
CUS1YMR240C YOL013W-AP0C272 63 aaPredicted RBP1.84□□□□□ -2.12
CUS1YMR240C LSM2P38203 95 aaKnown RBP1.83□□□□□ -2.12
CUS1YMR240C MVB12P42939 101 aa1.83□□□□□ -2.12
CUS1YMR240C HUG1Q6Q5K6 68 aa1.83□□□□□ -2.12
CUS1YMR240C PAU1P0CE88 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU14P0CE89 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU8P0CE92 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU11P0CE93 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU13P38725 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU4P53427 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU10Q03050 120 aa1.82□□□□□ -2.12
CUS1YMR240C PAU9Q3E770 120 aa1.82□□□□□ -2.12
CUS1YMR240C SEC16P48415 2195 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms