RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YLR342W-AQ3E810 57 aa2.96□□□□□ -1.94
VPS36YLR417W ENV10Q99382 181 aa2.96□□□□□ -1.94
VPS36YLR417W CCW14O13547 238 aa2.95□□□□□ -1.94
VPS36YLR417W YHL042WP38729 150 aa2.95□□□□□ -1.94
VPS36YLR417W YIL086CP40503 102 aa2.95□□□□□ -1.94
VPS36YLR417W YGR039WP53225 103 aa2.95□□□□□ -1.94
VPS36YLR417W YHP1Q04116 353 aa2.95□□□□□ -1.94
VPS36YLR417W KNH1P50112 268 aa2.94□□□□□ -1.94
VPS36YLR417W UBC7Q02159 165 aa2.94□□□□□ -1.94
VPS36YLR417W RPL2AP0CX45 254 aaKnown RBP2.93□□□□□ -1.94
VPS36YLR417W RPL2BP0CX46 254 aaKnown RBP2.93□□□□□ -1.94
VPS36YLR417W FIP1P45976 327 aa2.93□□□□□ -1.94
VPS36YLR417W COF1Q03048 143 aaKnown RBP2.93□□□□□ -1.94
VPS36YLR417W KTI11Q3E840 82 aa2.93□□□□□ -1.94
VPS36YLR417W ECM12O13529 151 aa2.93□□□□□ -1.94
VPS36YLR417W PBI2P0CT04 75 aaKnown RBP2.93□□□□□ -1.94
VPS36YLR417W TOM6P33448 61 aa2.93□□□□□ -1.94
VPS36YLR417W SPI1P40092 148 aa2.93□□□□□ -1.94
VPS36YLR417W YLR194CQ05777 254 aa2.93□□□□□ -1.94
VPS36YLR417W CWP2P43497 92 aa2.92□□□□□ -1.94
VPS36YLR417W MIX14Q04341 121 aa2.92□□□□□ -1.94
VPS36YLR417W IRC23Q08416 157 aa2.92□□□□□ -1.94
VPS36YLR417W YOR008C-AQ3E7B9 74 aa2.92□□□□□ -1.94
VPS36YLR417W HMRA2P0CY13 119 aa2.91□□□□□ -1.94
VPS36YLR417W PHO85P17157 305 aa2.91□□□□□ -1.94
VPS36YLR417W RRT1P38192 103 aa2.91□□□□□ -1.94
VPS36YLR417W YFL051CP43552 160 aa2.91□□□□□ -1.94
VPS36YLR417W UBC5P15732 148 aa2.9□□□□□ -1.94
VPS36YLR417W SBH1P52870 82 aa2.9□□□□□ -1.94
VPS36YLR417W AIM11P87275 137 aa2.9□□□□□ -1.94
VPS36YLR417W YDR119W-AQ2V2P9 66 aa2.9□□□□□ -1.94
VPS36YLR417W COA3Q3E7B2 85 aa2.9□□□□□ -1.94
VPS36YLR417W YPL038W-AQ3E7B4 63 aa2.9□□□□□ -1.94
VPS36YLR417W HUA1P40325 198 aa2.9□□□□□ -1.95
VPS36YLR417W ATP20Q12233 115 aa2.9□□□□□ -1.95
VPS36YLR417W YHR213WP0CI67 198 aa2.89□□□□□ -1.95
VPS36YLR417W YMR141CP40211 102 aa2.88□□□□□ -1.95
VPS36YLR417W DCV1P43595 202 aa2.88□□□□□ -1.95
VPS36YLR417W FYV12Q08559 129 aa2.88□□□□□ -1.95
VPS36YLR417W YDR029WQ12111 104 aa2.88□□□□□ -1.95
VPS36YLR417W QCR8P08525 94 aa2.88□□□□□ -1.95
VPS36YLR417W YER039C-AP0CD97 72 aa2.88□□□□□ -1.95
VPS36YLR417W IMP2P46972 177 aa2.88□□□□□ -1.95
VPS36YLR417W SIP18P50263 79 aa2.88□□□□□ -1.95
VPS36YLR417W YMR320WQ04897 101 aa2.88□□□□□ -1.95
VPS36YLR417W YDR381C-AQ3E6R5 114 aa2.88□□□□□ -1.95
VPS36YLR417W YEL067CP39978 195 aa2.87□□□□□ -1.95
VPS36YLR417W AIM19P40502 157 aa2.87□□□□□ -1.95
VPS36YLR417W VPS55P47111 140 aa2.87□□□□□ -1.95
VPS36YLR417W YSY6P38374 65 aa2.85□□□□□ -1.95
VPS36YLR417W YHL018WP38744 120 aaPredicted RBP2.85□□□□□ -1.95
VPS36YLR417W MPC2P38857 129 aa2.85□□□□□ -1.95
VPS36YLR417W HUR1P45820 110 aa2.85□□□□□ -1.95
VPS36YLR417W YPR013CQ12145 317 aa2.85□□□□□ -1.95
VPS36YLR417W YIL046W-AQ3E7Z4 54 aa2.85□□□□□ -1.95
VPS36YLR417W CDC39P25655 2108 aaKnown RBP2.85□□□□□ -1.95
VPS36YLR417W YDL022C-AP0C5L6 82 aa2.85□□□□□ -1.95
VPS36YLR417W YBR219CP38317 127 aa2.85□□□□□ -1.95
VPS36YLR417W YGR164WP53291 111 aa2.85□□□□□ -1.95
VPS36YLR417W YKR045CP36138 183 aa2.84□□□□□ -1.96
VPS36YLR417W POR2P40478 281 aa2.84□□□□□ -1.96
VPS36YLR417W YCR050CP25630 102 aa2.83□□□□□ -1.96
VPS36YLR417W MRPS12P53732 153 aa2.83□□□□□ -1.96
VPS36YLR417W YMR105W-AQ8TGS8 64 aa2.83□□□□□ -1.96
VPS36YLR417W CYR1P08678 2026 aaKnown RBP2.83□□□□□ -1.96
VPS36YLR417W YRA2P36036 203 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
VPS36YLR417W SHU1P38751 150 aa2.82□□□□□ -1.96
VPS36YLR417W YLR162WQ06235 118 aa2.82□□□□□ -1.96
VPS36YLR417W MRPL38P35996 138 aaPredicted RBP2.82□□□□□ -1.96
VPS36YLR417W YER135CP40082 130 aa2.82□□□□□ -1.96
VPS36YLR417W YER187WP40102 141 aa2.82□□□□□ -1.96
VPS36YLR417W BLM10P43583 2143 aa2.82□□□□□ -1.96
VPS36YLR417W RSM19P53733 91 aaPredicted RBP2.82□□□□□ -1.96
VPS36YLR417W YHR007C-AQ07074 71 aa2.82□□□□□ -1.96
VPS36YLR417W YAR029WP39549 74 aa2.8□□□□□ -1.96
VPS36YLR417W CCW12Q12127 133 aa2.8□□□□□ -1.96
VPS36YLR417W YBR200W-AQ3E755 54 aa2.8□□□□□ -1.96
VPS36YLR417W FAS1P07149 2051 aaKnown RBP2.8□□□□□ -1.96
VPS36YLR417W POL2P21951 2222 aaKnown RBP2.8□□□□□ -1.96
VPS36YLR417W YGL193CP53097 103 aa2.79□□□□□ -1.96
VPS36YLR417W IRC21Q04772 201 aa2.79□□□□□ -1.96
VPS36YLR417W COX8P04039 78 aa2.79□□□□□ -1.96
VPS36YLR417W RPL39P04650 51 aa2.79□□□□□ -1.96
VPS36YLR417W YLR042CQ07990 161 aa2.79□□□□□ -1.96
VPS36YLR417W YLR285C-AQ3E771 56 aa2.79□□□□□ -1.96
VPS36YLR417W YJR107C-AP0CT86 78 aa2.78□□□□□ -1.96
VPS36YLR417W UBC4P15731 148 aa2.78□□□□□ -1.96
VPS36YLR417W YNL190WP53872 204 aa2.78□□□□□ -1.96
VPS36YLR417W YMR175W-AQ3E766 64 aa2.78□□□□□ -1.96
VPS36YLR417W YOR381W-AQ3E804 55 aa2.78□□□□□ -1.96
VPS36YLR417W ACC1Q00955 2233 aaKnown RBP2.77□□□□□ -1.97
VPS36YLR417W YNL277W-AQ3E7Z0 62 aa2.77□□□□□ -1.97
VPS36YLR417W YNL146C-AQ3E7Z1 64 aa2.77□□□□□ -1.97
VPS36YLR417W KSH1Q8TGJ3 72 aa2.77□□□□□ -1.97
VPS36YLR417W AIM4P38305 123 aaPredicted RBP2.76□□□□□ -1.97
VPS36YLR417W YDR182W-AQ3E796 67 aa2.76□□□□□ -1.97
VPS36YLR417W PMP3P87284 55 aa2.76□□□□□ -1.97
VPS36YLR417W YHL037CP38733 133 aa2.75□□□□□ -1.97
VPS36YLR417W YEL008WP40001 126 aa2.75□□□□□ -1.97
VPS36YLR417W GAT4P40569 121 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms