RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YDR274CP87283 123 aa1.76□□□□□ -2.13
VPS13YLL040C EMC6Q12431 108 aa1.75□□□□□ -2.13
VPS13YLL040C YOR304C-AO14468 76 aa1.75□□□□□ -2.13
VPS13YLL040C ATP18P81450 59 aa1.75□□□□□ -2.13
VPS13YLL040C YBR144CP34215 104 aa1.75□□□□□ -2.13
VPS13YLL040C KNH1P50112 268 aa1.75□□□□□ -2.13
VPS13YLL040C YJR107C-AP0CT86 78 aa1.75□□□□□ -2.13
VPS13YLL040C SPC1P46965 94 aa1.74□□□□□ -2.13
VPS13YLL040C SRL1Q08673 210 aa1.74□□□□□ -2.13
VPS13YLL040C SMP1P38128 452 aa1.74□□□□□ -2.13
VPS13YLL040C CAX4P53223 239 aa1.74□□□□□ -2.13
VPS13YLL040C YNL162W-AQ3E7A8 72 aa1.74□□□□□ -2.13
VPS13YLL040C COX23P38824 151 aa1.74□□□□□ -2.13
VPS13YLL040C YER121WP40076 114 aa1.74□□□□□ -2.13
VPS13YLL040C HAL1Q01766 294 aa1.74□□□□□ -2.13
VPS13YLL040C YKL065W-AQ2V2P2 73 aa1.74□□□□□ -2.13
VPS13YLL040C YER085CP40058 173 aa1.74□□□□□ -2.13
VPS13YLL040C YDR246W-AQ3E763 66 aa1.74□□□□□ -2.13
VPS13YLL040C RPL26AP05743 127 aaKnown RBP1.73□□□□□ -2.13
VPS13YLL040C RPL26BP53221 127 aaKnown RBP1.73□□□□□ -2.13
VPS13YLL040C IRC21Q04772 201 aa1.73□□□□□ -2.13
VPS13YLL040C SBH1P52870 82 aa1.73□□□□□ -2.13
VPS13YLL040C YER039C-AP0CD97 72 aa1.73□□□□□ -2.13
VPS13YLL040C INO4P13902 151 aa1.73□□□□□ -2.13
VPS13YLL040C YCL048W-AQ2V2Q2 79 aa1.73□□□□□ -2.13
VPS13YLL040C CRC1Q12289 327 aa1.73□□□□□ -2.13
VPS13YLL040C YFL019CP43576 117 aa1.73□□□□□ -2.13
VPS13YLL040C YMR181CQ03231 154 aa1.73□□□□□ -2.13
VPS13YLL040C RPL18AP0CX49 186 aaKnown RBP1.73□□□□□ -2.13
VPS13YLL040C RPL18BP0CX50 186 aaKnown RBP1.73□□□□□ -2.13
VPS13YLL040C POL2P21951 2222 aaKnown RBP1.73□□□□□ -2.13
VPS13YLL040C YHR139C-AO13536 103 aa1.72□□□□□ -2.13
VPS13YLL040C TOS8P53147 276 aa1.72□□□□□ -2.13
VPS13YLL040C Q0297Q9ZZV8 51 aa1.72□□□□□ -2.13
VPS13YLL040C YHL018WP38744 120 aaPredicted RBP1.72□□□□□ -2.13
VPS13YLL040C YER135CP40082 130 aa1.72□□□□□ -2.13
VPS13YLL040C SEN1Q00416 2231 aaKnown RBP1.72□□□□□ -2.13
VPS13YLL040C RPB9P27999 122 aa1.72□□□□□ -2.13
VPS13YLL040C YBL039W-BP0C268 59 aa1.72□□□□□ -2.13
VPS13YLL040C YFR035CP43608 114 aa1.72□□□□□ -2.13
VPS13YLL040C MMS2P53152 137 aa1.72□□□□□ -2.13
VPS13YLL040C YLR361C-AQ3E795 98 aa1.72□□□□□ -2.13
VPS13YLL040C YBR182C-AQ8TGU6 64 aa1.71□□□□□ -2.14
VPS13YLL040C ATP15P21306 62 aa1.71□□□□□ -2.14
VPS13YLL040C PBI2P0CT04 75 aaKnown RBP1.71□□□□□ -2.14
VPS13YLL040C YBR219CP38317 127 aa1.71□□□□□ -2.14
VPS13YLL040C EDC2P40023 145 aaPredicted RBP1.71□□□□□ -2.14
VPS13YLL040C YLL006W-AQ3E814 58 aa1.71□□□□□ -2.14
VPS13YLL040C TDA8Q6B2U8 126 aa1.71□□□□□ -2.14
VPS13YLL040C YLR415CO13578 112 aa1.71□□□□□ -2.14
VPS13YLL040C RPL36BO14455 100 aaKnown RBP1.71□□□□□ -2.14
VPS13YLL040C RPL36AP05745 100 aaPredicted RBP1.71□□□□□ -2.14
VPS13YLL040C TAR1Q8TGM6 124 aa1.71□□□□□ -2.14
VPS13YLL040C YPR117WQ06116 2489 aa1.71□□□□□ -2.14
VPS13YLL040C YBR121C-AP0C5L4 52 aa1.71□□□□□ -2.14
VPS13YLL040C YNL042W-BQ3E7Z2 85 aa1.71□□□□□ -2.14
VPS13YLL040C RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
VPS13YLL040C RPL33BP41056 107 aaKnown RBP1.71□□□□□ -2.14
VPS13YLL040C SPS100P13130 326 aa1.7□□□□□ -2.14
VPS13YLL040C SPT4P32914 102 aaPredicted RBP1.7□□□□□ -2.14
VPS13YLL040C TSC3Q3E790 80 aa1.7□□□□□ -2.14
VPS13YLL040C FYV5P25585 152 aa1.7□□□□□ -2.14
VPS13YLL040C BRR2P32639 2163 aaKnown RBP1.7□□□□□ -2.14
VPS13YLL040C MVB12P42939 101 aa1.7□□□□□ -2.14
VPS13YLL040C COF1Q03048 143 aaKnown RBP1.7□□□□□ -2.14
VPS13YLL040C YDR114CQ04597 100 aa1.7□□□□□ -2.14
VPS13YLL040C YOR314WQ12506 109 aa1.7□□□□□ -2.14
VPS13YLL040C HFA1P32874 2273 aa1.7□□□□□ -2.14
VPS13YLL040C YHL005CP38752 130 aa1.69□□□□□ -2.14
VPS13YLL040C YMR295CQ03559 197 aa1.69□□□□□ -2.14
VPS13YLL040C PRM7Q12459 698 aa1.69□□□□□ -2.14
VPS13YLL040C GLT1Q12680 2145 aaKnown RBP1.69□□□□□ -2.14
VPS13YLL040C YIL059CP40520 121 aa1.69□□□□□ -2.14
VPS13YLL040C YBR230W-AQ3E762 66 aa1.69□□□□□ -2.14
VPS13YLL040C ECM19Q06011 112 aa1.68□□□□□ -2.14
VPS13YLL040C YKL069WP36088 180 aa1.68□□□□□ -2.14
VPS13YLL040C YNL184CP53876 108 aa1.68□□□□□ -2.14
VPS13YLL040C YLL066W-BQ8TGJ7 56 aa1.68□□□□□ -2.14
VPS13YLL040C RPL28P02406 149 aaKnown RBP1.68□□□□□ -2.14
VPS13YLL040C YFR009W-AP0C5M9 85 aa1.68□□□□□ -2.14
VPS13YLL040C WWM1P43582 211 aaKnown RBP1.68□□□□□ -2.14
VPS13YLL040C PBA1Q05778 276 aa1.68□□□□□ -2.14
VPS13YLL040C YGL041C-BQ3E750 60 aa1.68□□□□□ -2.14
VPS13YLL040C YDR115WQ04598 105 aa1.68□□□□□ -2.14
VPS13YLL040C YGR121W-AQ3E816 71 aa1.68□□□□□ -2.14
VPS13YLL040C YER187WP40102 141 aa1.67□□□□□ -2.14
VPS13YLL040C DSE2P38844 325 aa1.67□□□□□ -2.14
VPS13YLL040C YGL193CP53097 103 aa1.67□□□□□ -2.14
VPS13YLL040C YDR029WQ12111 104 aa1.67□□□□□ -2.14
VPS13YLL040C ATP20Q12233 115 aa1.67□□□□□ -2.14
VPS13YLL040C RTG1P32607 177 aa1.67□□□□□ -2.14
VPS13YLL040C YLR162WQ06235 118 aa1.67□□□□□ -2.14
VPS13YLL040C HHF1P02309 103 aaKnown RBP1.67□□□□□ -2.14
VPS13YLL040C SGF11Q03067 99 aa1.67□□□□□ -2.14
VPS13YLL040C LIP1Q03579 150 aa1.67□□□□□ -2.14
VPS13YLL040C RTC6O14464 93 aa1.67□□□□□ -2.14
VPS13YLL040C TMC1Q08422 150 aaPredicted RBP1.67□□□□□ -2.14
VPS13YLL040C GCN1P33892 2672 aaKnown RBP1.67□□□□□ -2.14
VPS13YLL040C DDR2P89113 61 aa1.67□□□□□ -2.14
VPS13YLL040C YLR281CQ05863 155 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms