RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W RDS3Q06835 107 aaPredicted RBP1.55□□□□□ -2.16
SNU114YKL173W CMC4Q3E7A9 73 aa1.55□□□□□ -2.16
SNU114YKL173W OST5Q92316 86 aa1.55□□□□□ -2.16
SNU114YKL173W DYN1P36022 4092 aa1.55□□□□□ -2.16
SNU114YKL173W YMR175W-AQ3E766 64 aa1.55□□□□□ -2.16
SNU114YKL173W YLR236CA0A023PZG4 107 aa1.54□□□□□ -2.16
SNU114YKL173W UTR5P32630 166 aa1.54□□□□□ -2.16
SNU114YKL173W YNL198CP40166 100 aa1.54□□□□□ -2.16
SNU114YKL173W POP3P53833 195 aaPredicted RBP1.54□□□□□ -2.16
SNU114YKL173W AVO2Q04749 426 aa1.54□□□□□ -2.16
SNU114YKL173W YMR321CQ04898 105 aa1.54□□□□□ -2.16
SNU114YKL173W YPR013CQ12145 317 aa1.54□□□□□ -2.16
SNU114YKL173W POL2P21951 2222 aaKnown RBP1.54□□□□□ -2.16
SNU114YKL173W MHF2Q3E829 80 aa1.54□□□□□ -2.16
SNU114YKL173W SWM2P40342 146 aa1.53□□□□□ -2.16
SNU114YKL173W BRP1P53194 125 aa1.53□□□□□ -2.16
SNU114YKL173W HPA2Q06592 156 aa1.53□□□□□ -2.16
SNU114YKL173W CYR1P08678 2026 aaKnown RBP1.53□□□□□ -2.16
SNU114YKL173W RPL22AP05749 121 aaKnown RBP1.53□□□□□ -2.16
SNU114YKL173W ROX3P25046 220 aa1.53□□□□□ -2.16
SNU114YKL173W TIM12P32830 109 aa1.53□□□□□ -2.16
SNU114YKL173W TOM6P33448 61 aa1.53□□□□□ -2.16
SNU114YKL173W RPB7P34087 171 aa1.53□□□□□ -2.16
SNU114YKL173W SRX1P36077 127 aa1.53□□□□□ -2.16
SNU114YKL173W PDX3P38075 228 aaKnown RBP1.53□□□□□ -2.16
SNU114YKL173W SPC1P46965 94 aa1.53□□□□□ -2.16
SNU114YKL173W IMP2P46972 177 aa1.53□□□□□ -2.16
SNU114YKL173W YJL144WP47009 104 aa1.53□□□□□ -2.16
SNU114YKL173W CYT2Q00873 224 aa1.53□□□□□ -2.16
SNU114YKL173W PAU23Q07987 124 aa1.53□□□□□ -2.16
SNU114YKL173W PAU17Q12370 124 aa1.53□□□□□ -2.16
SNU114YKL173W RPL36BO14455 100 aaKnown RBP1.53□□□□□ -2.17
SNU114YKL173W RPL36AP05745 100 aaPredicted RBP1.53□□□□□ -2.17
SNU114YKL173W FPR1P20081 114 aaKnown RBP1.53□□□□□ -2.17
SNU114YKL173W RPL33BP41056 107 aaKnown RBP1.53□□□□□ -2.17
SNU114YKL173W MIC27P50945 234 aa1.53□□□□□ -2.17
SNU114YKL173W RGM1Q00453 211 aa1.53□□□□□ -2.17
SNU114YKL173W PIR1Q03178 341 aa1.53□□□□□ -2.17
SNU114YKL173W VMA9Q3E7B6 73 aa1.53□□□□□ -2.17
SNU114YKL173W SEC11P15367 167 aa1.52□□□□□ -2.17
SNU114YKL173W MRP17P28778 131 aa1.52□□□□□ -2.17
SNU114YKL173W YIR020CP40575 100 aa1.52□□□□□ -2.17
SNU114YKL173W YDR114CQ04597 100 aa1.52□□□□□ -2.17
SNU114YKL173W YLR285C-AQ3E771 56 aa1.52□□□□□ -2.17
SNU114YKL173W YDR381C-AQ3E6R5 114 aa1.52□□□□□ -2.17
SNU114YKL173W YBR209WP38311 105 aa1.51□□□□□ -2.17
SNU114YKL173W YOR105WQ08504 108 aa1.51□□□□□ -2.17
SNU114YKL173W QCR8P08525 94 aa1.51□□□□□ -2.17
SNU114YKL173W CIS3P47001 227 aa1.51□□□□□ -2.17
SNU114YKL173W YPR153WQ06537 140 aa1.51□□□□□ -2.17
SNU114YKL173W RIF1P29539 1916 aa1.51□□□□□ -2.17
SNU114YKL173W COX8P04039 78 aa1.5□□□□□ -2.17
SNU114YKL173W YHR022CP38763 256 aa1.5□□□□□ -2.17
SNU114YKL173W MET31Q03081 177 aa1.5□□□□□ -2.17
SNU114YKL173W FIT2Q08906 153 aa1.5□□□□□ -2.17
SNU114YKL173W YFL041W-AQ3E817 63 aa1.5□□□□□ -2.17
SNU114YKL173W SLH1P53327 1967 aaKnown RBP1.5□□□□□ -2.17
SNU114YKL173W PAU6P0CE90 120 aa1.5□□□□□ -2.17
SNU114YKL173W PAU18P0CE91 120 aa1.5□□□□□ -2.17
SNU114YKL173W LSM6Q06406 86 aaKnown RBP1.5□□□□□ -2.17
SNU114YKL173W YMR030W-AQ3E760 96 aa1.5□□□□□ -2.17
SNU114YKL173W YCR095W-AQ3E787 52 aa1.5□□□□□ -2.17
SNU114YKL173W ECM29P38737 1868 aa1.49□□□□□ -2.17
SNU114YKL173W MRPL31P14063 131 aaPredicted RBP1.49□□□□□ -2.17
SNU114YKL173W HSP150P32478 413 aa1.49□□□□□ -2.17
SNU114YKL173W YHL005CP38752 130 aa1.49□□□□□ -2.17
SNU114YKL173W YDL157CQ12082 118 aa1.49□□□□□ -2.17
SNU114YKL173W YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
SNU114YKL173W URA2P07259 2214 aaKnown RBP1.49□□□□□ -2.17
SNU114YKL173W YHR214C-DP0CX93 97 aa1.48□□□□□ -2.17
SNU114YKL173W YEL014CP39999 101 aa1.48□□□□□ -2.17
SNU114YKL173W SNA2P56508 79 aa1.48□□□□□ -2.17
SNU114YKL173W PRM7Q12459 698 aa1.48□□□□□ -2.17
SNU114YKL173W YOR343CQ12484 108 aa1.48□□□□□ -2.17
SNU114YKL173W BLM10P43583 2143 aa1.48□□□□□ -2.17
SNU114YKL173W UBR2Q07963 1872 aa1.48□□□□□ -2.17
SNU114YKL173W AIM4P38305 123 aaPredicted RBP1.48□□□□□ -2.17
SNU114YKL173W YOL118CQ08259 102 aa1.48□□□□□ -2.17
SNU114YKL173W YIL102C-AQ2V2P5 75 aa1.48□□□□□ -2.17
SNU114YKL173W PAU8P0CE92 120 aa1.48□□□□□ -2.17
SNU114YKL173W PAU11P0CE93 120 aa1.48□□□□□ -2.17
SNU114YKL173W FPR2P32472 135 aa1.48□□□□□ -2.17
SNU114YKL173W PAU13P38725 120 aa1.48□□□□□ -2.17
SNU114YKL173W PAU4P53427 120 aa1.48□□□□□ -2.17
SNU114YKL173W PAU10Q03050 120 aa1.48□□□□□ -2.17
SNU114YKL173W MIX17Q03667 156 aa1.48□□□□□ -2.17
SNU114YKL173W PAU9Q3E770 120 aa1.48□□□□□ -2.17
SNU114YKL173W PAU1P0CE88 120 aa1.47□□□□□ -2.17
SNU114YKL173W PAU14P0CE89 120 aa1.47□□□□□ -2.17
SNU114YKL173W MRPL38P35996 138 aaPredicted RBP1.47□□□□□ -2.17
SNU114YKL173W PAU20Q08322 120 aa1.47□□□□□ -2.17
SNU114YKL173W YBL071CP38185 102 aa1.47□□□□□ -2.17
SNU114YKL173W SED1Q01589 338 aa1.47□□□□□ -2.17
SNU114YKL173W YJL197C-AP0C5P0 93 aa1.46□□□□□ -2.18
SNU114YKL173W PFY1P07274 126 aa1.46□□□□□ -2.18
SNU114YKL173W YGL014C-AP0C5N1 53 aa1.46□□□□□ -2.18
SNU114YKL173W POR2P40478 281 aa1.46□□□□□ -2.18
SNU114YKL173W VPS55P47111 140 aa1.46□□□□□ -2.18
SNU114YKL173W YER188C-AP0C0V2 99 aa1.45□□□□□ -2.18
SNU114YKL173W YBR027CP38220 110 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms