RNA–Protein interactions for RNA: YJR093C

FIP1, Transcript of Subunit of cleavage polyadenylation factor (CPF), yeast

Gene FIP1, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIP1	YJR093C	BCK1	Q01389	1478 aa		0.67	□□□□□ -2.3
FIP1	YJR093C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.67	□□□□□ -2.3
FIP1	YJR093C	LSM6	Q06406	86 aa	Known RBP	0.67	□□□□□ -2.3
FIP1	YJR093C	YDR010C	Q12426	110 aa		0.67	□□□□□ -2.3
FIP1	YJR093C	SMC4	Q12267	1418 aa		0.66	□□□□□ -2.3
FIP1	YJR093C	YOR304C-A	O14468	76 aa		0.66	□□□□□ -2.3
FIP1	YJR093C	YCL048W-A	Q2V2Q2	79 aa		0.66	□□□□□ -2.3
FIP1	YJR093C	RRP5	Q05022	1729 aa	Known RBP	0.66	□□□□□ -2.3
FIP1	YJR093C	YBR056W-A	I2HB52	66 aa		0.65	□□□□□ -2.31
FIP1	YJR093C	BUD23	P25627	275 aa	Predicted RBP	0.65	□□□□□ -2.31
FIP1	YJR093C	HUR1	P45820	110 aa		0.65	□□□□□ -2.31
FIP1	YJR093C	YDR034W-B	Q6Q5X2	51 aa		0.65	□□□□□ -2.31
FIP1	YJR093C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.65	□□□□□ -2.31
FIP1	YJR093C	IRA2	P19158	3079 aa		0.65	□□□□□ -2.31
FIP1	YJR093C	RIM15	P43565	1770 aa		0.65	□□□□□ -2.31
FIP1	YJR093C	PAU16	P35994	123 aa		0.64	□□□□□ -2.31
FIP1	YJR093C	GCV3	P39726	170 aa	Predicted RBP	0.64	□□□□□ -2.31
FIP1	YJR093C	PAU15	P40585	124 aa		0.64	□□□□□ -2.31
FIP1	YJR093C	FAS2	P19097	1887 aa	Known RBP	0.64	□□□□□ -2.31
FIP1	YJR093C	MDN1	Q12019	4910 aa	Known RBP	0.64	□□□□□ -2.31
FIP1	YJR093C	FIG2	P25653	1609 aa		0.64	□□□□□ -2.31
FIP1	YJR093C	HAP1	P0CE41	1502 aa		0.64	□□□□□ -2.31
FIP1	YJR093C	YLR419W	Q06698	1435 aa	Known RBP	0.64	□□□□□ -2.31
FIP1	YJR093C	PMD1	P32634	1753 aa		0.63	□□□□□ -2.31
FIP1	YJR093C	YHR173C	P38864	112 aa		0.63	□□□□□ -2.31
FIP1	YJR093C	YDR210W	Q03482	75 aa		0.63	□□□□□ -2.31
FIP1	YJR093C	CCW14	O13547	238 aa		0.62	□□□□□ -2.31
FIP1	YJR093C	RPS29B	P41058	56 aa	Known RBP	0.62	□□□□□ -2.31
FIP1	YJR093C	RUB1	Q03919	77 aa		0.62	□□□□□ -2.31
FIP1	YJR093C	YOL164W-A	Q3E7A5	60 aa		0.62	□□□□□ -2.31
FIP1	YJR093C	YPR117W	Q06116	2489 aa		0.62	□□□□□ -2.31
FIP1	YJR093C	LHP1	P33399	275 aa	Known RBP	0.61	□□□□□ -2.31
FIP1	YJR093C	IMP2	P46972	177 aa		0.61	□□□□□ -2.31
FIP1	YJR093C	YOL118C	Q08259	102 aa		0.61	□□□□□ -2.31
FIP1	YJR093C	YBR072C-A	Q3E794	53 aa		0.61	□□□□□ -2.31
FIP1	YJR093C	DYN1	P36022	4092 aa		0.6	□□□□□ -2.31
FIP1	YJR093C	NUM1	Q00402	2748 aa		0.6	□□□□□ -2.31
FIP1	YJR093C	POL2	P21951	2222 aa	Known RBP	0.6	□□□□□ -2.31
FIP1	YJR093C	YHR138C	P38841	114 aa	Predicted RBP	0.6	□□□□□ -2.31
FIP1	YJR093C	YIL086C	P40503	102 aa		0.6	□□□□□ -2.31
FIP1	YJR093C	YGR164W	P53291	111 aa		0.6	□□□□□ -2.31
FIP1	YJR093C	APC1	P53886	1748 aa		0.59	□□□□□ -2.31
FIP1	YJR093C	VMA21	P41806	77 aa		0.59	□□□□□ -2.31
FIP1	YJR093C	UTP10	P42945	1769 aa	Known RBP	0.59	□□□□□ -2.32
FIP1	YJR093C	TEL1	P38110	2787 aa		0.59	□□□□□ -2.32
FIP1	YJR093C	SHU1	P38751	150 aa		0.58	□□□□□ -2.32
FIP1	YJR093C	MIC10	Q96VH5	97 aa		0.58	□□□□□ -2.32
FIP1	YJR093C	TRA1	P38811	3744 aa		0.58	□□□□□ -2.32
FIP1	YJR093C	LYS2	P07702	1392 aa		0.57	□□□□□ -2.32
FIP1	YJR093C	KRE5	P22023	1365 aa		0.57	□□□□□ -2.32
FIP1	YJR093C	SWC7	Q06707	132 aa		0.57	□□□□□ -2.32
FIP1	YJR093C	CAT8	P39113	1433 aa		0.56	□□□□□ -2.32
FIP1	YJR093C	HKR1	P41809	1802 aa		0.56	□□□□□ -2.32
FIP1	YJR093C	MYO1	P08964	1928 aa		0.56	□□□□□ -2.32
FIP1	YJR093C	GEA1	P47102	1408 aa	Predicted RBP	0.55	□□□□□ -2.32
FIP1	YJR093C	YCR101C	P25607	182 aa		0.55	□□□□□ -2.32
FIP1	YJR093C	GNA1	P43577	159 aa	Predicted RBP	0.55	□□□□□ -2.32
FIP1	YJR093C	YPL038W-A	Q3E7B4	63 aa		0.55	□□□□□ -2.32
FIP1	YJR093C	GCN1	P33892	2672 aa	Known RBP	0.55	□□□□□ -2.32
FIP1	YJR093C	SRB8	P25648	1427 aa		0.54	□□□□□ -2.32
FIP1	YJR093C	TOR2	P32600	2474 aa	Known RBP	0.53	□□□□□ -2.32
FIP1	YJR093C	RPA12	P32529	125 aa	Known RBP	0.53	□□□□□ -2.32
FIP1	YJR093C	YMR103C	Q04436	120 aa		0.53	□□□□□ -2.32
FIP1	YJR093C	COX19	Q3E731	98 aa		0.53	□□□□□ -2.32
FIP1	YJR093C	YOS1	Q3E834	85 aa		0.53	□□□□□ -2.32
FIP1	YJR093C	TAO3	P40468	2376 aa		0.53	□□□□□ -2.33
FIP1	YJR093C	CSF1	Q12150	2958 aa		0.52	□□□□□ -2.33
FIP1	YJR093C	TOR1	P35169	2470 aa		0.52	□□□□□ -2.33
FIP1	YJR093C	MPC2	P38857	129 aa		0.52	□□□□□ -2.33
FIP1	YJR093C	UBC4	P15731	148 aa		0.51	□□□□□ -2.33
FIP1	YJR093C	FLO1	P32768	1537 aa		0.51	□□□□□ -2.33
FIP1	YJR093C	RSF2	P46974	1380 aa		0.51	□□□□□ -2.33
FIP1	YJR093C	FMP27	Q06179	2628 aa		0.51	□□□□□ -2.33
FIP1	YJR093C	CUP1-1	P0CX80	61 aa		0.5	□□□□□ -2.33
FIP1	YJR093C	CUP1-2	P0CX81	61 aa		0.5	□□□□□ -2.33
FIP1	YJR093C	YER137C	P40083	148 aa	Known RBP	0.5	□□□□□ -2.33
FIP1	YJR093C	SRB6	P32570	121 aa		0.49	□□□□□ -2.33
FIP1	YJR093C	ECM29	P38737	1868 aa		0.49	□□□□□ -2.33
FIP1	YJR093C	MOT1	P32333	1867 aa		0.48	□□□□□ -2.33
FIP1	YJR093C	PAU5	P43575	122 aa		0.47	□□□□□ -2.33
FIP1	YJR093C	RPS12	P48589	143 aa	Known RBP	0.47	□□□□□ -2.33
FIP1	YJR093C	YCR095W-A	Q3E787	52 aa		0.47	□□□□□ -2.33
FIP1	YJR093C	MLP1	Q02455	1875 aa	Known RBP	0.47	□□□□□ -2.33
FIP1	YJR093C	RPS11A	P0CX47	156 aa	Known RBP	0.46	□□□□□ -2.34
FIP1	YJR093C	RPS11B	P0CX48	156 aa	Known RBP	0.46	□□□□□ -2.34
FIP1	YJR093C	MRX7	P53869	86 aa		0.46	□□□□□ -2.34
FIP1	YJR093C	COX12	Q01519	83 aa		0.46	□□□□□ -2.34
FIP1	YJR093C	YMR090W	Q04304	227 aa	Known RBP	0.46	□□□□□ -2.34
FIP1	YJR093C	SEN1	Q00416	2231 aa	Known RBP	0.45	□□□□□ -2.34
FIP1	YJR093C	UBC5	P15732	148 aa		0.45	□□□□□ -2.34
FIP1	YJR093C	MRPL38	P35996	138 aa	Predicted RBP	0.45	□□□□□ -2.34
FIP1	YJR093C	PAU6	P0CE90	120 aa		0.44	□□□□□ -2.34
FIP1	YJR093C	PAU18	P0CE91	120 aa		0.44	□□□□□ -2.34
FIP1	YJR093C	YBR090C	P38253	122 aa		0.43	□□□□□ -2.34
FIP1	YJR093C	UTP20	P35194	2493 aa	Known RBP	0.43	□□□□□ -2.34
FIP1	YJR093C	YNL190W	P53872	204 aa		0.42	□□□□□ -2.34
FIP1	YJR093C	MEC1	P38111	2368 aa		0.41	□□□□□ -2.34
FIP1	YJR093C	ROX3	P25046	220 aa		0.41	□□□□□ -2.34
FIP1	YJR093C	RSM19	P53733	91 aa	Predicted RBP	0.41	□□□□□ -2.34
FIP1	YJR093C	SNA2	P56508	79 aa		0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms