RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W SMX2P40204 77 aaKnown RBP0.28□□□□□ -2.36
HIT1YJR055W GNA1P43577 159 aaPredicted RBP0.28□□□□□ -2.36
HIT1YJR055W YDR366CP87287 132 aa0.28□□□□□ -2.36
HIT1YJR055W PKR1Q03880 122 aaKnown RBP0.28□□□□□ -2.36
HIT1YJR055W NAT5Q08689 176 aa0.28□□□□□ -2.36
HIT1YJR055W ECM12O13529 151 aa0.27□□□□□ -2.37
HIT1YJR055W FUN14P18411 198 aa0.27□□□□□ -2.37
HIT1YJR055W MRPL44P19956 98 aa0.27□□□□□ -2.37
HIT1YJR055W PDX3P38075 228 aaKnown RBP0.27□□□□□ -2.37
HIT1YJR055W IPI1P38803 334 aaPredicted RBP0.27□□□□□ -2.37
HIT1YJR055W YNL019CP53975 284 aa0.27□□□□□ -2.37
HIT1YJR055W ERI1P62651 68 aaKnown RBP0.27□□□□□ -2.37
HIT1YJR055W SOM1Q05676 74 aa0.27□□□□□ -2.37
HIT1YJR055W YPR108W-AQ3E7B3 70 aa0.27□□□□□ -2.37
HIT1YJR055W KSH1Q8TGJ3 72 aa0.27□□□□□ -2.37
HIT1YJR055W FYV5P25585 152 aa0.26□□□□□ -2.37
HIT1YJR055W YBR032WP38223 100 aa0.26□□□□□ -2.37
HIT1YJR055W YAL064WP39711 94 aa0.26□□□□□ -2.37
HIT1YJR055W HPM1P40481 377 aa0.26□□□□□ -2.37
HIT1YJR055W LSM1P47017 172 aaKnown RBP0.26□□□□□ -2.37
HIT1YJR055W LSM8P47093 109 aaKnown RBP0.26□□□□□ -2.37
HIT1YJR055W HHO1P53551 258 aa0.26□□□□□ -2.37
HIT1YJR055W DYN2Q02647 92 aa0.26□□□□□ -2.37
HIT1YJR055W SEN15Q04675 128 aa0.26□□□□□ -2.37
HIT1YJR055W YMR122W-AQ3E842 84 aa0.26□□□□□ -2.37
HIT1YJR055W HUG1Q6Q5K6 68 aa0.26□□□□□ -2.37
HIT1YJR055W YLR365WQ7LIF2 110 aa0.26□□□□□ -2.37
HIT1YJR055W UBC5P15732 148 aa0.25□□□□□ -2.37
HIT1YJR055W SEC59P20048 519 aa0.25□□□□□ -2.37
HIT1YJR055W SFT2P38166 215 aa0.25□□□□□ -2.37
HIT1YJR055W SPI1P40092 148 aa0.25□□□□□ -2.37
HIT1YJR055W YGL204CP53089 101 aa0.25□□□□□ -2.37
HIT1YJR055W BRP1P53194 125 aa0.25□□□□□ -2.37
HIT1YJR055W YGR042WP53227 271 aa0.25□□□□□ -2.37
HIT1YJR055W YGL258W-AQ3E740 77 aa0.25□□□□□ -2.37
HIT1YJR055W COX9P07255 59 aa0.24□□□□□ -2.37
HIT1YJR055W YLR157W-EP0CF00 54 aa0.24□□□□□ -2.37
HIT1YJR055W EMP24P32803 203 aaKnown RBP0.24□□□□□ -2.37
HIT1YJR055W LSM2P38203 95 aaKnown RBP0.24□□□□□ -2.37
HIT1YJR055W YHR173CP38864 112 aa0.24□□□□□ -2.37
HIT1YJR055W YIL163CP40448 117 aa0.24□□□□□ -2.37
HIT1YJR055W PAM16P42949 149 aa0.24□□□□□ -2.37
HIT1YJR055W YJR128WP47162 119 aa0.24□□□□□ -2.37
HIT1YJR055W SDH7Q04401 133 aa0.24□□□□□ -2.37
HIT1YJR055W FRQ1Q06389 190 aa0.24□□□□□ -2.37
HIT1YJR055W YOR385WQ08909 290 aa0.24□□□□□ -2.37
HIT1YJR055W YPR145C-AQ2V2P0 78 aa0.24□□□□□ -2.37
HIT1YJR055W YOR034C-AQ3E735 80 aa0.24□□□□□ -2.37
HIT1YJR055W YGL041C-BQ3E750 60 aa0.24□□□□□ -2.37
HIT1YJR055W Q0017Q9ZZX8 53 aa0.24□□□□□ -2.37
HIT1YJR055W RPC10P40422 70 aa0.23□□□□□ -2.37
HIT1YJR055W CWP2P43497 92 aa0.23□□□□□ -2.37
HIT1YJR055W PAU12P53343 120 aa0.23□□□□□ -2.37
HIT1YJR055W YCL001W-AP87012 153 aa0.23□□□□□ -2.37
HIT1YJR055W YLR296WQ05898 108 aa0.23□□□□□ -2.37
HIT1YJR055W POC4Q12245 148 aaPredicted RBP0.23□□□□□ -2.37
HIT1YJR055W ATP14Q12349 124 aa0.23□□□□□ -2.37
HIT1YJR055W YBR200W-AQ3E755 54 aa0.23□□□□□ -2.37
HIT1YJR055W MRPL11P36521 249 aaPredicted RBP0.22□□□□□ -2.37
HIT1YJR055W PAU24P38155 120 aa0.22□□□□□ -2.37
HIT1YJR055W MVB12P42939 101 aa0.22□□□□□ -2.37
HIT1YJR055W YGR039WP53225 103 aa0.22□□□□□ -2.37
HIT1YJR055W PMP3P87284 55 aa0.22□□□□□ -2.37
HIT1YJR055W HAP3P13434 144 aa0.21□□□□□ -2.38
HIT1YJR055W MRP49P32388 137 aa0.21□□□□□ -2.38
HIT1YJR055W FPR2P32472 135 aa0.21□□□□□ -2.38
HIT1YJR055W PAU2P32612 120 aa0.21□□□□□ -2.38
HIT1YJR055W AIM4P38305 123 aaPredicted RBP0.21□□□□□ -2.38
HIT1YJR055W MOG1P47123 218 aa0.21□□□□□ -2.38
HIT1YJR055W MRPL31P14063 131 aaPredicted RBP0.2□□□□□ -2.38
HIT1YJR055W GSP1P32835 219 aaKnown RBP0.2□□□□□ -2.38
HIT1YJR055W YHL005CP38752 130 aa0.2□□□□□ -2.38
HIT1YJR055W COF1Q03048 143 aaKnown RBP0.2□□□□□ -2.38
HIT1YJR055W YMR082CQ04276 118 aa0.2□□□□□ -2.38
HIT1YJR055W Q0032Q9ZZX7 96 aa0.2□□□□□ -2.38
HIT1YJR055W PAU21P0CE86 164 aa0.19□□□□□ -2.38
HIT1YJR055W PAU22P0CE87 164 aa0.19□□□□□ -2.38
HIT1YJR055W COX7P10174 60 aa0.19□□□□□ -2.38
HIT1YJR055W MRP17P28778 131 aa0.19□□□□□ -2.38
HIT1YJR055W QCR10P37299 77 aa0.19□□□□□ -2.38
HIT1YJR055W YMR175W-AQ3E766 64 aa0.19□□□□□ -2.38
HIT1YJR055W YLR099W-AQ3E798 87 aa0.19□□□□□ -2.38
HIT1YJR055W YGR121W-AQ3E816 71 aa0.19□□□□□ -2.38
HIT1YJR055W PCC1Q3E833 88 aa0.19□□□□□ -2.38
HIT1YJR055W ENV10Q99382 181 aa0.19□□□□□ -2.38
HIT1YJR055W YER039C-AP0CD97 72 aa0.18□□□□□ -2.38
HIT1YJR055W YCR050CP25630 102 aa0.18□□□□□ -2.38
HIT1YJR055W ICS3P47034 131 aa0.18□□□□□ -2.38
HIT1YJR055W RBL2P48606 106 aaKnown RBP0.18□□□□□ -2.38
HIT1YJR055W MIC27P50945 234 aa0.18□□□□□ -2.38
HIT1YJR055W YDR042CQ03205 200 aa0.18□□□□□ -2.38
HIT1YJR055W YLR118CQ12354 227 aa0.18□□□□□ -2.38
HIT1YJR055W YAL065CO13511 128 aa0.17□□□□□ -2.38
HIT1YJR055W RPL36BO14455 100 aaKnown RBP0.17□□□□□ -2.38
HIT1YJR055W RPL36AP05745 100 aaPredicted RBP0.17□□□□□ -2.38
HIT1YJR055W UTP11P34247 250 aaPredicted RBP0.17□□□□□ -2.38
HIT1YJR055W YBR016WP38216 128 aa0.17□□□□□ -2.38
HIT1YJR055W HSP10P38910 106 aa0.17□□□□□ -2.38
HIT1YJR055W TVP18Q04767 167 aa0.17□□□□□ -2.38
HIT1YJR055W SPC2Q04969 178 aa0.17□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms