RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YDR042CQ03205 200 aa2.17□□□□□ -2.06
UBP12YJL197W YCR095W-AQ3E787 52 aa2.17□□□□□ -2.06
UBP12YJL197W MHF2Q3E829 80 aa2.17□□□□□ -2.06
UBP12YJL197W ROX3P25046 220 aa2.17□□□□□ -2.06
UBP12YJL197W SNF2P22082 1703 aa2.17□□□□□ -2.06
UBP12YJL197W SNA2P56508 79 aa2.16□□□□□ -2.06
UBP12YJL197W YOL118CQ08259 102 aa2.16□□□□□ -2.06
UBP12YJL197W YJL009WP47078 108 aa2.16□□□□□ -2.06
UBP12YJL197W VPS55P47111 140 aa2.16□□□□□ -2.06
UBP12YJL197W CDC39P25655 2108 aaKnown RBP2.16□□□□□ -2.06
UBP12YJL197W RRP5Q05022 1729 aaKnown RBP2.15□□□□□ -2.06
UBP12YJL197W MIC27P50945 234 aa2.15□□□□□ -2.07
UBP12YJL197W CCW12Q12127 133 aa2.15□□□□□ -2.07
UBP12YJL197W CWP2P43497 92 aa2.14□□□□□ -2.07
UBP12YJL197W YBR013CP38215 129 aa2.14□□□□□ -2.07
UBP12YJL197W ICS3P47034 131 aa2.14□□□□□ -2.07
UBP12YJL197W YHR212W-AP0CX91 67 aa2.13□□□□□ -2.07
UBP12YJL197W AQY2P0CD90 149 aa2.13□□□□□ -2.07
UBP12YJL197W YSP2Q06681 1438 aa2.13□□□□□ -2.07
UBP12YJL197W IMP2P46972 177 aa2.12□□□□□ -2.07
UBP12YJL197W ICY1Q04329 127 aa2.12□□□□□ -2.07
UBP12YJL197W YOR072WQ08486 104 aa2.12□□□□□ -2.07
UBP12YJL197W YGR240C-AQ3E786 66 aa2.12□□□□□ -2.07
UBP12YJL197W YNL122CP53921 115 aaPredicted RBP2.12□□□□□ -2.07
UBP12YJL197W GSC2P40989 1895 aa2.11□□□□□ -2.07
UBP12YJL197W URB1P34241 1764 aaKnown RBP2.11□□□□□ -2.07
UBP12YJL197W RPS22BQ3E7Y3 130 aaKnown RBP2.1□□□□□ -2.07
UBP12YJL197W YPL038W-AQ3E7B4 63 aa2.1□□□□□ -2.07
UBP12YJL197W MRPL31P14063 131 aaPredicted RBP2.09□□□□□ -2.07
UBP12YJL197W MRP17P28778 131 aa2.09□□□□□ -2.07
UBP12YJL197W YAR064WP39563 99 aa2.09□□□□□ -2.07
UBP12YJL197W LCL2Q08045 131 aa2.09□□□□□ -2.07
UBP12YJL197W FKS3Q04952 1785 aa2.09□□□□□ -2.08
UBP12YJL197W YCR085WP25650 117 aa2.08□□□□□ -2.08
UBP12YJL197W SRB8P25648 1427 aa2.08□□□□□ -2.08
UBP12YJL197W PAU6P0CE90 120 aa2.08□□□□□ -2.08
UBP12YJL197W PAU18P0CE91 120 aa2.08□□□□□ -2.08
UBP12YJL197W YBL071CP38185 102 aa2.08□□□□□ -2.08
UBP12YJL197W SPC1P46965 94 aa2.08□□□□□ -2.08
UBP12YJL197W CCW14O13547 238 aa2.08□□□□□ -2.08
UBP12YJL197W YCR001WP25347 104 aa2.07□□□□□ -2.08
UBP12YJL197W NUP192P47054 1683 aa2.07□□□□□ -2.08
UBP12YJL197W NHP2P32495 156 aaPredicted RBP2.07□□□□□ -2.08
UBP12YJL197W MVB12P42939 101 aa2.07□□□□□ -2.08
UBP12YJL197W MRPS12P53732 153 aa2.06□□□□□ -2.08
UBP12YJL197W YOL013W-AP0C272 63 aaPredicted RBP2.06□□□□□ -2.08
UBP12YJL197W RPA12P32529 125 aaKnown RBP2.06□□□□□ -2.08
UBP12YJL197W LSM2P38203 95 aaKnown RBP2.05□□□□□ -2.08
UBP12YJL197W COX12Q01519 83 aa2.05□□□□□ -2.08
UBP12YJL197W MGR2Q02889 113 aa2.05□□□□□ -2.08
UBP12YJL197W YMR175W-AQ3E766 64 aa2.05□□□□□ -2.08
UBP12YJL197W ACC1Q00955 2233 aaKnown RBP2.05□□□□□ -2.08
UBP12YJL197W YIL102CP40488 101 aa2.05□□□□□ -2.08
UBP12YJL197W CYR1P08678 2026 aaKnown RBP2.04□□□□□ -2.08
UBP12YJL197W PAU1P0CE88 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU14P0CE89 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU8P0CE92 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU11P0CE93 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU13P38725 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU10Q03050 120 aa2.04□□□□□ -2.08
UBP12YJL197W PAU9Q3E770 120 aa2.04□□□□□ -2.08
UBP12YJL197W MRPL38P35996 138 aaPredicted RBP2.04□□□□□ -2.08
UBP12YJL197W PAU4P53427 120 aa2.03□□□□□ -2.08
UBP12YJL197W AIM19P40502 157 aa2.03□□□□□ -2.08
UBP12YJL197W APC1P53886 1748 aa2.03□□□□□ -2.08
UBP12YJL197W PAU20Q08322 120 aa2.03□□□□□ -2.09
UBP12YJL197W POC4Q12245 148 aaPredicted RBP2.03□□□□□ -2.09
UBP12YJL197W MRX7P53869 86 aa2.02□□□□□ -2.09
UBP12YJL197W HUG1Q6Q5K6 68 aa2.02□□□□□ -2.09
UBP12YJL197W YHR213W-AQ8TGT4 77 aa2.02□□□□□ -2.09
UBP12YJL197W TOM6P33448 61 aa2.02□□□□□ -2.09
UBP12YJL197W YNR034W-AQ3E841 98 aa2.01□□□□□ -2.09
UBP12YJL197W YMR007WQ03675 126 aa2.01□□□□□ -2.09
UBP12YJL197W TY4B-JP47024 1803 aa2□□□□□ -2.09
UBP12YJL197W YDR210WQ03482 75 aa2□□□□□ -2.09
UBP12YJL197W YOR343CQ12484 108 aa2□□□□□ -2.09
UBP12YJL197W UBR2Q07963 1872 aa2□□□□□ -2.09
UBP12YJL197W LCL1Q02786 101 aa1.99□□□□□ -2.09
UBP12YJL197W RIM15P43565 1770 aa1.99□□□□□ -2.09
UBP12YJL197W BSC4P53841 131 aa1.99□□□□□ -2.09
UBP12YJL197W FIG2P25653 1609 aa1.98□□□□□ -2.09
UBP12YJL197W TY4B-HP0C2J7 1802 aa1.98□□□□□ -2.09
UBP12YJL197W MYO1P08964 1928 aa1.98□□□□□ -2.09
UBP12YJL197W YIL086CP40503 102 aa1.97□□□□□ -2.09
UBP12YJL197W YPR145C-AQ2V2P0 78 aa1.97□□□□□ -2.09
UBP12YJL197W PAI3P01094 68 aa1.96□□□□□ -2.1
UBP12YJL197W YDR381C-AQ3E6R5 114 aa1.96□□□□□ -2.1
UBP12YJL197W YHR214C-DP0CX93 97 aa1.96□□□□□ -2.1
UBP12YJL197W UTP10P42945 1769 aaKnown RBP1.96□□□□□ -2.1
UBP12YJL197W HHY1P39982 102 aa1.96□□□□□ -2.1
UBP12YJL197W YOR105WQ08504 108 aa1.96□□□□□ -2.1
UBP12YJL197W YLR255CO13574 117 aa1.95□□□□□ -2.1
UBP12YJL197W RPS11AP0CX47 156 aaKnown RBP1.95□□□□□ -2.1
UBP12YJL197W RPS11BP0CX48 156 aaKnown RBP1.95□□□□□ -2.1
UBP12YJL197W SHU1P38751 150 aa1.95□□□□□ -2.1
UBP12YJL197W MPC2P38857 129 aa1.95□□□□□ -2.1
UBP12YJL197W YJR128WP47162 119 aa1.95□□□□□ -2.1
UBP12YJL197W FPR2P32472 135 aa1.94□□□□□ -2.1
UBP12YJL197W YBR292CP38357 123 aa1.94□□□□□ -2.1
UBP12YJL197W YHR213W-BQ8TGK1 99 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms