RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W MSL1P40567 111 aaPredicted RBP4.78□□□□□ -1.64
APE4YHR113W GLC8P41818 229 aa4.78□□□□□ -1.64
APE4YHR113W SNA2P56508 79 aa4.78□□□□□ -1.64
APE4YHR113W SEC11P15367 167 aa4.77□□□□□ -1.65
APE4YHR113W YBL081WP38180 368 aaKnown RBP4.77□□□□□ -1.65
APE4YHR113W SHU1P38751 150 aa4.77□□□□□ -1.65
APE4YHR113W YMR175W-AQ3E766 64 aa4.77□□□□□ -1.65
APE4YHR113W YDR034C-AP0C289 58 aa4.76□□□□□ -1.65
APE4YHR113W FUN14P18411 198 aa4.76□□□□□ -1.65
APE4YHR113W RPC10P40422 70 aa4.76□□□□□ -1.65
APE4YHR113W GAT4P40569 121 aa4.76□□□□□ -1.65
APE4YHR113W YGL230CP53074 147 aa4.76□□□□□ -1.65
APE4YHR113W BET5Q03630 159 aa4.76□□□□□ -1.65
APE4YHR113W YLR194CQ05777 254 aa4.76□□□□□ -1.65
APE4YHR113W PPT2Q12036 173 aa4.76□□□□□ -1.65
APE4YHR113W PEX17P40155 199 aa4.75□□□□□ -1.65
APE4YHR113W YDR029WQ12111 104 aa4.75□□□□□ -1.65
APE4YHR113W RPL28P02406 149 aaKnown RBP4.75□□□□□ -1.65
APE4YHR113W CPR1P14832 162 aaKnown RBP4.75□□□□□ -1.65
APE4YHR113W YKR041WP36134 250 aa4.75□□□□□ -1.65
APE4YHR113W YPL073CP40323 161 aa4.75□□□□□ -1.65
APE4YHR113W LCL2Q08045 131 aa4.75□□□□□ -1.65
APE4YHR113W NAT5Q08689 176 aa4.75□□□□□ -1.65
APE4YHR113W VTC1P40046 129 aaRIP-Chip data4.74□□□□□ -1.65not detected
APE4YHR113W YDL022C-AP0C5L6 82 aa4.73□□□□□ -1.65
APE4YHR113W YKL044WP36092 106 aa4.73□□□□□ -1.65
APE4YHR113W YDL157CQ12082 118 aa4.73□□□□□ -1.65
APE4YHR113W ADH1P00330 348 aaKnown RBP4.72□□□□□ -1.65
APE4YHR113W COX14P39103 70 aa4.72□□□□□ -1.65
APE4YHR113W YAL065CO13511 128 aa4.71□□□□□ -1.66
APE4YHR113W MMS2P53152 137 aa4.71□□□□□ -1.66
APE4YHR113W YPL229WQ99395 206 aa4.71□□□□□ -1.66
APE4YHR113W TOA2P32774 122 aa4.7□□□□□ -1.66
APE4YHR113W SMD1Q02260 146 aaPredicted RBP4.7□□□□□ -1.66
APE4YHR113W QCR8P08525 94 aa4.69□□□□□ -1.66
APE4YHR113W ATP5P09457 212 aa4.69□□□□□ -1.66
APE4YHR113W AQY2P0CD90 149 aa4.69□□□□□ -1.66
APE4YHR113W HAP3P13434 144 aa4.69□□□□□ -1.66
APE4YHR113W CDC43P18898 376 aa4.69□□□□□ -1.66
APE4YHR113W YEL067CP39978 195 aa4.69□□□□□ -1.66
APE4YHR113W YNL190WP53872 204 aa4.69□□□□□ -1.66
APE4YHR113W ELC1Q03071 99 aa4.69□□□□□ -1.66
APE4YHR113W IGO2Q9P305 131 aa4.69□□□□□ -1.66
APE4YHR113W ARO2P28777 376 aaKnown RBP4.69□□□□□ -1.66
APE4YHR113W CWP2P43497 92 aa4.69□□□□□ -1.66
APE4YHR113W GIS2P53849 153 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
APE4YHR113W YCR007CP25354 239 aa4.68□□□□□ -1.66
APE4YHR113W YDL241WQ07738 123 aa4.68□□□□□ -1.66
APE4YHR113W MID2P36027 376 aa4.67□□□□□ -1.66
APE4YHR113W MRPS12P53732 153 aa4.67□□□□□ -1.66
APE4YHR113W YNR077CP53758 84 aa4.67□□□□□ -1.66
APE4YHR113W YER039C-AP0CD97 72 aa4.66□□□□□ -1.66
APE4YHR113W SMP1P38128 452 aa4.66□□□□□ -1.66
APE4YHR113W YML079WQ03629 201 aa4.66□□□□□ -1.66
APE4YHR113W YLL006W-AQ3E814 58 aa4.66□□□□□ -1.66
APE4YHR113W Q0032Q9ZZX7 96 aa4.66□□□□□ -1.66
APE4YHR113W PEX22P39718 180 aa4.65□□□□□ -1.66
APE4YHR113W MVB12P42939 101 aa4.65□□□□□ -1.66
APE4YHR113W YGL041C-BQ3E750 60 aa4.65□□□□□ -1.66
APE4YHR113W ECM12O13529 151 aa4.64□□□□□ -1.67
APE4YHR113W YBL039W-BP0C268 59 aa4.63□□□□□ -1.67
APE4YHR113W YFL019CP43576 117 aa4.63□□□□□ -1.67
APE4YHR113W YHR130CP38834 111 aa4.62□□□□□ -1.67
APE4YHR113W PAU23Q07987 124 aa4.62□□□□□ -1.67
APE4YHR113W PAU17Q12370 124 aa4.62□□□□□ -1.67
APE4YHR113W YDL085C-AQ3E7B7 68 aaKnown RBP4.62□□□□□ -1.67
APE4YHR113W YLR307C-AQ3E825 87 aa4.62□□□□□ -1.67
APE4YHR113W MBF1O14467 151 aaKnown RBP4.61□□□□□ -1.67
APE4YHR113W LCL1Q02786 101 aa4.61□□□□□ -1.67
APE4YHR113W YLR363W-AQ3E747 85 aa4.61□□□□□ -1.67
APE4YHR113W ISD11Q6Q560 94 aa4.61□□□□□ -1.67
APE4YHR113W PBI2P0CT04 75 aaKnown RBP4.6□□□□□ -1.67
APE4YHR113W YIA6P40556 373 aa4.6□□□□□ -1.67
APE4YHR113W COF1Q03048 143 aaKnown RBP4.6□□□□□ -1.67
APE4YHR113W HPA2Q06592 156 aa4.6□□□□□ -1.67
APE4YHR113W IGD1P43598 195 aa4.59□□□□□ -1.67
APE4YHR113W HYP2P23301 157 aaKnown RBP4.57□□□□□ -1.68
APE4YHR113W AIM19P40502 157 aa4.57□□□□□ -1.68
APE4YHR113W PAI3P01094 68 aa4.56□□□□□ -1.68
APE4YHR113W OST2P46964 130 aa4.56□□□□□ -1.68
APE4YHR113W RPL26AP05743 127 aaKnown RBP4.56□□□□□ -1.68
APE4YHR113W RPL29P05747 59 aaPredicted RBP4.56□□□□□ -1.68
APE4YHR113W YER181CP40097 107 aa4.56□□□□□ -1.68
APE4YHR113W KNH1P50112 268 aa4.56□□□□□ -1.68
APE4YHR113W SBH1P52870 82 aa4.56□□□□□ -1.68
APE4YHR113W RPL26BP53221 127 aaKnown RBP4.56□□□□□ -1.68
APE4YHR113W YOR020W-AQ3E824 90 aa4.56□□□□□ -1.68
APE4YHR113W RGM1Q00453 211 aa4.55□□□□□ -1.68
APE4YHR113W KTI11Q3E840 82 aa4.55□□□□□ -1.68
APE4YHR113W YPR170W-BP0C5R9 85 aa4.54□□□□□ -1.68
APE4YHR113W COX10P21592 462 aa4.54□□□□□ -1.68
APE4YHR113W NHP2P32495 156 aaPredicted RBP4.53□□□□□ -1.68
APE4YHR113W YGR039WP53225 103 aa4.53□□□□□ -1.68
APE4YHR113W IRC21Q04772 201 aa4.53□□□□□ -1.68
APE4YHR113W YOR034C-AQ3E735 80 aa4.53□□□□□ -1.68
APE4YHR113W UBC4P15731 148 aa4.52□□□□□ -1.69
APE4YHR113W YFL067WP43537 175 aa4.52□□□□□ -1.69
APE4YHR113W YGL193CP53097 103 aa4.52□□□□□ -1.69
APE4YHR113W YKL023C-AQ2V2P3 75 aa4.52□□□□□ -1.69
APE4YHR113W YNL162W-AQ3E7A8 72 aa4.52□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms