RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C QCR8P08525 94 aa2.11□□□□□ -2.07
NMD2YHR077C ANB1P19211 157 aa2.11□□□□□ -2.07
NMD2YHR077C YCL042WP25572 119 aa2.11□□□□□ -2.07
NMD2YHR077C YIL059CP40520 121 aa2.11□□□□□ -2.07
NMD2YHR077C RGM1Q00453 211 aa2.11□□□□□ -2.07
NMD2YHR077C YGR035W-AQ45U48 73 aa2.11□□□□□ -2.07
NMD2YHR077C RPL33AP05744 107 aaKnown RBP2.11□□□□□ -2.07
NMD2YHR077C RPR2P40571 144 aa2.11□□□□□ -2.07
NMD2YHR077C RPL33BP41056 107 aaKnown RBP2.11□□□□□ -2.07
NMD2YHR077C OST2P46964 130 aa2.11□□□□□ -2.07
NMD2YHR077C YDL186WP48568 277 aa2.11□□□□□ -2.07
NMD2YHR077C RUB1Q03919 77 aa2.11□□□□□ -2.07
NMD2YHR077C CWP2P43497 92 aa2.11□□□□□ -2.07
NMD2YHR077C YOR034C-AQ3E735 80 aa2.11□□□□□ -2.07
NMD2YHR077C UTP20P35194 2493 aaKnown RBP2.11□□□□□ -2.07
NMD2YHR077C YLR236CA0A023PZG4 107 aa2.1□□□□□ -2.07
NMD2YHR077C STF1P01098 86 aa2.1□□□□□ -2.07
NMD2YHR077C MSA2P36157 363 aa2.1□□□□□ -2.07
NMD2YHR077C EOS1P53938 366 aa2.1□□□□□ -2.07
NMD2YHR077C YDR381C-AQ3E6R5 114 aa2.1□□□□□ -2.07
NMD2YHR077C YLR415CO13578 112 aa2.1□□□□□ -2.07
NMD2YHR077C RPA12P32529 125 aaKnown RBP2.1□□□□□ -2.07
NMD2YHR077C YAR029WP39549 74 aa2.1□□□□□ -2.07
NMD2YHR077C YLL006W-AQ3E814 58 aa2.1□□□□□ -2.07
NMD2YHR077C YCL021W-AQ96VH3 125 aa2.1□□□□□ -2.07
NMD2YHR077C YPL229WQ99395 206 aa2.1□□□□□ -2.07
NMD2YHR077C YMR320WQ04897 101 aa2.09□□□□□ -2.07
NMD2YHR077C NHP2P32495 156 aaPredicted RBP2.09□□□□□ -2.07
NMD2YHR077C SVP26P38869 228 aa2.09□□□□□ -2.07
NMD2YHR077C GAT4P40569 121 aa2.09□□□□□ -2.07
NMD2YHR077C YLR122CQ12312 125 aa2.09□□□□□ -2.07
NMD2YHR077C SLO1Q3E784 85 aa2.09□□□□□ -2.07
NMD2YHR077C MDN1Q12019 4910 aaKnown RBP2.09□□□□□ -2.08
NMD2YHR077C RPC10P40422 70 aa2.09□□□□□ -2.08
NMD2YHR077C PPT2Q12036 173 aa2.09□□□□□ -2.08
NMD2YHR077C CRC1Q12289 327 aa2.09□□□□□ -2.08
NMD2YHR077C ERG28P40030 148 aa2.08□□□□□ -2.08
NMD2YHR077C IGD1P43598 195 aa2.08□□□□□ -2.08
NMD2YHR077C YAL063C-AQ3E791 96 aa2.08□□□□□ -2.08
NMD2YHR077C RPL29P05747 59 aaPredicted RBP2.08□□□□□ -2.08
NMD2YHR077C DSE2P38844 325 aa2.08□□□□□ -2.08
NMD2YHR077C YLR281CQ05863 155 aa2.08□□□□□ -2.08
NMD2YHR077C HPA2Q06592 156 aa2.08□□□□□ -2.08
NMD2YHR077C YDL241WQ07738 123 aa2.08□□□□□ -2.08
NMD2YHR077C KRE1P17260 313 aa2.07□□□□□ -2.08
NMD2YHR077C IRC21Q04772 201 aa2.07□□□□□ -2.08
NMD2YHR077C YNL162W-AQ3E7A8 72 aa2.07□□□□□ -2.08
NMD2YHR077C YLR307C-AQ3E825 87 aa2.07□□□□□ -2.08
NMD2YHR077C YHR130CP38834 111 aa2.07□□□□□ -2.08
NMD2YHR077C SGF11Q03067 99 aa2.07□□□□□ -2.08
NMD2YHR077C YIL002W-AQ3E7Z5 69 aa2.07□□□□□ -2.08
NMD2YHR077C ERI1P62651 68 aaKnown RBP2.06□□□□□ -2.08
NMD2YHR077C YMR175W-AQ3E766 64 aa2.06□□□□□ -2.08
NMD2YHR077C YOR020W-AQ3E824 90 aa2.06□□□□□ -2.08
NMD2YHR077C ISD11Q6Q560 94 aa2.06□□□□□ -2.08
NMD2YHR077C MRPL24P36525 258 aaPredicted RBP2.06□□□□□ -2.08
NMD2YHR077C ENV10Q99382 181 aa2.06□□□□□ -2.08
NMD2YHR077C AIM19P40502 157 aa2.06□□□□□ -2.08
NMD2YHR077C RRT15Q3E811 62 aa2.06□□□□□ -2.08
NMD2YHR077C INO4P13902 151 aa2.05□□□□□ -2.08
NMD2YHR077C ATX1P38636 73 aa2.05□□□□□ -2.08
NMD2YHR077C YAL064WP39711 94 aa2.05□□□□□ -2.08
NMD2YHR077C HUR1P45820 110 aa2.05□□□□□ -2.08
NMD2YHR077C ICY1Q04329 127 aa2.05□□□□□ -2.08
NMD2YHR077C YCR075W-AQ3E830 75 aa2.05□□□□□ -2.08
NMD2YHR077C MPC3P53311 146 aa2.05□□□□□ -2.08
NMD2YHR077C YPL257WQ08974 193 aa2.05□□□□□ -2.08
NMD2YHR077C SMP1P38128 452 aa2.04□□□□□ -2.08
NMD2YHR077C YFL065CP43539 102 aa2.04□□□□□ -2.08
NMD2YHR077C KNH1P50112 268 aa2.04□□□□□ -2.08
NMD2YHR077C YPR203WQ08994 102 aa2.04□□□□□ -2.08
NMD2YHR077C UBC4P15731 148 aa2.04□□□□□ -2.08
NMD2YHR077C MVB12P42939 101 aa2.04□□□□□ -2.08
NMD2YHR077C YAR1P46683 200 aa2.04□□□□□ -2.08
NMD2YHR077C EDC1P53080 175 aaPredicted RBP2.04□□□□□ -2.08
NMD2YHR077C SKI6P46948 246 aaPredicted RBP2.03□□□□□ -2.08
NMD2YHR077C YFL041W-AQ3E817 63 aa2.03□□□□□ -2.08
NMD2YHR077C YFR009W-AP0C5M9 85 aa2.03□□□□□ -2.08
NMD2YHR077C PBA1Q05778 276 aa2.03□□□□□ -2.08
NMD2YHR077C YDR119W-AQ2V2P9 66 aa2.03□□□□□ -2.08
NMD2YHR077C YNL184CP53876 108 aa2.02□□□□□ -2.09
NMD2YHR077C YRA2P36036 203 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
NMD2YHR077C YFL019CP43576 117 aa2.02□□□□□ -2.09
NMD2YHR077C YPR010C-AA5Z2X5 72 aa2.01□□□□□ -2.09
NMD2YHR077C YHR139C-AO13536 103 aa2.01□□□□□ -2.09
NMD2YHR077C RTC6O14464 93 aa2.01□□□□□ -2.09
NMD2YHR077C PBI2P0CT04 75 aaKnown RBP2.01□□□□□ -2.09
NMD2YHR077C YCR085WP25650 117 aa2.01□□□□□ -2.09
NMD2YHR077C ABF2Q02486 183 aa2.01□□□□□ -2.09
NMD2YHR077C YBR230W-AQ3E762 66 aa2.01□□□□□ -2.09
NMD2YHR077C AQY2P0CD90 149 aa2.01□□□□□ -2.09
NMD2YHR077C YJR107C-AP0CT86 78 aa2.01□□□□□ -2.09
NMD2YHR077C SPC1P46965 94 aa2.01□□□□□ -2.09
NMD2YHR077C GIS2P53849 153 aaKnown RBP RIP-Chip data2□□□□□ -2.09 RIP-Chip
NMD2YHR077C ATP18P81450 59 aa2□□□□□ -2.09
NMD2YHR077C YDR246W-AQ3E763 66 aa2□□□□□ -2.09
NMD2YHR077C YBL039W-BP0C268 59 aa2□□□□□ -2.09
NMD2YHR077C YER175W-AQ8TGU4 54 aa2□□□□□ -2.09
NMD2YHR077C YOL014WQ08110 124 aa1.99□□□□□ -2.09
NMD2YHR077C SMD1Q02260 146 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms