RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W YMR175W-AQ3E766 64 aa7.69□□□□□ -1.18
TRM5YHR070W YAL065CO13511 128 aa7.68□□□□□ -1.18
TRM5YHR070W UGX2P32772 223 aa7.68□□□□□ -1.18
TRM5YHR070W ISU2Q12056 156 aa7.68□□□□□ -1.18
TRM5YHR070W RRT15Q3E811 62 aa7.68□□□□□ -1.18
TRM5YHR070W TOA2P32774 122 aa7.68□□□□□ -1.18
TRM5YHR070W PPT2Q12036 173 aa7.68□□□□□ -1.18
TRM5YHR070W ADH1P00330 348 aaKnown RBP7.67□□□□□ -1.18
TRM5YHR070W YBL081WP38180 368 aaKnown RBP7.67□□□□□ -1.18
TRM5YHR070W YAL064WP39711 94 aa7.66□□□□□ -1.18
TRM5YHR070W MID2P36027 376 aa7.62□□□□□ -1.19
TRM5YHR070W YDL241WQ07738 123 aa7.62□□□□□ -1.19
TRM5YHR070W MBF1O14467 151 aaKnown RBP7.62□□□□□ -1.19
TRM5YHR070W CWP2P43497 92 aa7.62□□□□□ -1.19
TRM5YHR070W RPL11AP0C0W9 174 aaKnown RBP7.61□□□□□ -1.19
TRM5YHR070W YPR170W-BP0C5R9 85 aa7.61□□□□□ -1.19
TRM5YHR070W UIP3P39547 235 aa7.61□□□□□ -1.19
TRM5YHR070W YLR296WQ05898 108 aa7.61□□□□□ -1.19
TRM5YHR070W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
TRM5YHR070W YKL023C-AQ2V2P3 75 aa7.61□□□□□ -1.19
TRM5YHR070W RPL11BQ3E757 174 aaPredicted RBP7.61□□□□□ -1.19
TRM5YHR070W CDC43P18898 376 aa7.6□□□□□ -1.19
TRM5YHR070W YER181CP40097 107 aa7.6□□□□□ -1.19
TRM5YHR070W YAR023CD6VPM8 179 aa7.58□□□□□ -1.2
TRM5YHR070W SAP30P38429 201 aa7.58□□□□□ -1.2
TRM5YHR070W YPR195CQ06594 109 aa7.58□□□□□ -1.2
TRM5YHR070W PAI3P01094 68 aa7.57□□□□□ -1.2
TRM5YHR070W UBC11P52492 156 aa7.57□□□□□ -1.2
TRM5YHR070W YPL080CQ02826 108 aa7.57□□□□□ -1.2
TRM5YHR070W YLL006W-AQ3E814 58 aa7.57□□□□□ -1.2
TRM5YHR070W YIL102C-AQ2V2P5 75 aa7.56□□□□□ -1.2
TRM5YHR070W CPR1P14832 162 aaKnown RBP7.53□□□□□ -1.2
TRM5YHR070W YNL198CP40166 100 aa7.52□□□□□ -1.2
TRM5YHR070W YIA6P40556 373 aa7.52□□□□□ -1.2
TRM5YHR070W SMD1Q02260 146 aaPredicted RBP7.52□□□□□ -1.2
TRM5YHR070W AQY2P0CD90 149 aa7.52□□□□□ -1.21
TRM5YHR070W MVB12P42939 101 aa7.52□□□□□ -1.21
TRM5YHR070W RGM1Q00453 211 aa7.52□□□□□ -1.21
TRM5YHR070W ABF2Q02486 183 aa7.51□□□□□ -1.21
TRM5YHR070W LSM6Q06406 86 aaKnown RBP7.51□□□□□ -1.21
TRM5YHR070W HPA2Q06592 156 aa7.51□□□□□ -1.21
TRM5YHR070W SNA2P56508 79 aa7.5□□□□□ -1.21
TRM5YHR070W YHR130CP38834 111 aa7.49□□□□□ -1.21
TRM5YHR070W YOR020W-AQ3E824 90 aa7.49□□□□□ -1.21
TRM5YHR070W NHP2P32495 156 aaPredicted RBP7.48□□□□□ -1.21
TRM5YHR070W YOR304C-AO14468 76 aa7.47□□□□□ -1.21
TRM5YHR070W RPL29P05747 59 aaPredicted RBP7.47□□□□□ -1.21
TRM5YHR070W ANB1P19211 157 aa7.47□□□□□ -1.21
TRM5YHR070W YFL019CP43576 117 aa7.47□□□□□ -1.21
TRM5YHR070W YAR1P46683 200 aa7.47□□□□□ -1.21
TRM5YHR070W ARO2P28777 376 aaKnown RBP7.47□□□□□ -1.21
TRM5YHR070W DUT1P33317 147 aa7.46□□□□□ -1.22
TRM5YHR070W YDR029WQ12111 104 aa7.46□□□□□ -1.22
TRM5YHR070W MRP10O75012 95 aa7.45□□□□□ -1.22
TRM5YHR070W YBL039W-BP0C268 59 aa7.45□□□□□ -1.22
TRM5YHR070W MET32Q12041 191 aa7.45□□□□□ -1.22
TRM5YHR070W HYP2P23301 157 aaKnown RBP7.44□□□□□ -1.22
TRM5YHR070W SMP1P38128 452 aa7.44□□□□□ -1.22
TRM5YHR070W KNH1P50112 268 aa7.44□□□□□ -1.22
TRM5YHR070W YLR361C-AQ3E795 98 aa7.44□□□□□ -1.22
TRM5YHR070W YPL229WQ99395 206 aa7.44□□□□□ -1.22
TRM5YHR070W YDR034C-AP0C289 58 aa7.43□□□□□ -1.22
TRM5YHR070W COX10P21592 462 aa7.43□□□□□ -1.22
TRM5YHR070W AIM19P40502 157 aa7.43□□□□□ -1.22
TRM5YHR070W IGD1P43598 195 aa7.42□□□□□ -1.22
TRM5YHR070W IRC21Q04772 201 aa7.42□□□□□ -1.22
TRM5YHR070W PEX22P39718 180 aa7.39□□□□□ -1.23
TRM5YHR070W ICY1Q04329 127 aa7.39□□□□□ -1.23
TRM5YHR070W YOR034C-AQ3E735 80 aa7.39□□□□□ -1.23
TRM5YHR070W YNL162W-AQ3E7A8 72 aa7.39□□□□□ -1.23
TRM5YHR070W MDN1Q12019 4910 aaKnown RBP7.38□□□□□ -1.23
TRM5YHR070W UBC4P15731 148 aa7.38□□□□□ -1.23
TRM5YHR070W MRPL24P36525 258 aaPredicted RBP7.38□□□□□ -1.23
TRM5YHR070W YGL041C-BQ3E750 60 aa7.38□□□□□ -1.23
TRM5YHR070W HUR1P45820 110 aa7.37□□□□□ -1.23
TRM5YHR070W Q0032Q9ZZX7 96 aa7.37□□□□□ -1.23
TRM5YHR070W ECM12O13529 151 aa7.36□□□□□ -1.23
TRM5YHR070W RPS28BP0C0X0 67 aaKnown RBP7.36□□□□□ -1.23
TRM5YHR070W LCL2Q08045 131 aa7.36□□□□□ -1.23
TRM5YHR070W RPS28AQ3E7X9 67 aaPredicted RBP7.36□□□□□ -1.23
TRM5YHR070W YPL257WQ08974 193 aa7.35□□□□□ -1.23
TRM5YHR070W YIR021W-AQ3E739 70 aa7.35□□□□□ -1.23
TRM5YHR070W GAT4P40569 121 aa7.34□□□□□ -1.23
TRM5YHR070W SLO1Q3E784 85 aa7.34□□□□□ -1.23
TRM5YHR070W YLR307C-AQ3E825 87 aa7.34□□□□□ -1.23
TRM5YHR070W YLR236CA0A023PZG4 107 aa7.33□□□□□ -1.24
TRM5YHR070W YBR121C-AP0C5L4 52 aa7.32□□□□□ -1.24
TRM5YHR070W RPL26AP05743 127 aaKnown RBP7.31□□□□□ -1.24
TRM5YHR070W RPL26BP53221 127 aaKnown RBP7.31□□□□□ -1.24
TRM5YHR070W MSA2P36157 363 aa7.3□□□□□ -1.24
TRM5YHR070W YGL193CP53097 103 aa7.28□□□□□ -1.24
TRM5YHR070W YNL184CP53876 108 aa7.27□□□□□ -1.25
TRM5YHR070W YBR230W-AQ3E762 66 aa7.27□□□□□ -1.25
TRM5YHR070W MPC3P53311 146 aa7.27□□□□□ -1.25
TRM5YHR070W DSE2P38844 325 aa7.26□□□□□ -1.25
TRM5YHR070W YNL042W-BQ3E7Z2 85 aa7.25□□□□□ -1.25
TRM5YHR070W YJL127C-BQ3E828 52 aa7.25□□□□□ -1.25
TRM5YHR070W FYV5P25585 152 aa7.24□□□□□ -1.25
TRM5YHR070W YKL183C-AQ3E765 70 aa7.22□□□□□ -1.25
TRM5YHR070W LCL1Q02786 101 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms