RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	YRF1-8	P0CX22	1796 aa		1.47	□□□□□ -2.17
VMA10	YHR039C-A	RTC6	O14464	93 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	YIR020C	P40575	100 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	YFL051C	P43552	160 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	IMP2	P46972	177 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	MIC27	P50945	234 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	YPR145C-A	Q2V2P0	78 aa		1.46	□□□□□ -2.18
VMA10	YHR039C-A	YHR214C-D	P0CX93	97 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	PAU16	P35994	123 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	SRX1	P36077	127 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	PAU15	P40585	124 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	YIL014C-A	Q02598	104 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	VMA9	Q3E7B6	73 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	YFL041W-A	Q3E817	63 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	IML1	P47170	1584 aa		1.45	□□□□□ -2.18
VMA10	YHR039C-A	ROX3	P25046	220 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	COX23	P38824	151 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	PAU5	P43575	122 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	YLR194C	Q05777	254 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	YOL118C	Q08259	102 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	CMC4	Q3E7A9	73 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	YPL038W-A	Q3E7B4	63 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	MHF2	Q3E829	80 aa		1.44	□□□□□ -2.18
VMA10	YHR039C-A	RPS22A	P0C0W1	130 aa	Known RBP	1.43	□□□□□ -2.18
VMA10	YHR039C-A	NHP2	P32495	156 aa	Predicted RBP	1.43	□□□□□ -2.18
VMA10	YHR039C-A	YOR343C	Q12484	108 aa		1.43	□□□□□ -2.18
VMA10	YHR039C-A	YIL102C-A	Q2V2P5	75 aa		1.43	□□□□□ -2.18
VMA10	YHR039C-A	SLH1	P53327	1967 aa	Known RBP	1.43	□□□□□ -2.18
VMA10	YHR039C-A	ARO1	P08566	1588 aa	Known RBP	1.42	□□□□□ -2.18
VMA10	YHR039C-A	MRP17	P28778	131 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	HSP150	P32478	413 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	PDX3	P38075	228 aa	Known RBP	1.42	□□□□□ -2.18
VMA10	YHR039C-A	YHL037C	P38733	133 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	YEL014C	P39999	101 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	LST8	P41318	303 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	YOR105W	Q08504	108 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	SNF2	P22082	1703 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	KOG1	P38873	1557 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	DNF3	Q12674	1656 aa		1.42	□□□□□ -2.18
VMA10	YHR039C-A	RPL36B	O14455	100 aa	Known RBP	1.41	□□□□□ -2.18
VMA10	YHR039C-A	RPL36A	P05745	100 aa	Predicted RBP	1.41	□□□□□ -2.18
VMA10	YHR039C-A	COX12	Q01519	83 aa		1.41	□□□□□ -2.18
VMA10	YHR039C-A	LSM6	Q06406	86 aa	Known RBP	1.41	□□□□□ -2.18
VMA10	YHR039C-A	HPA2	Q06592	156 aa		1.41	□□□□□ -2.18
VMA10	YHR039C-A	RPS22B	Q3E7Y3	130 aa	Known RBP	1.41	□□□□□ -2.18
VMA10	YHR039C-A	HMRA2	P0CY13	119 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	TIM12	P32830	109 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	YBR027C	P38220	110 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	POR2	P40478	281 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	YMR321C	Q04898	105 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	YOR314W	Q12506	109 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	YCR095W-A	Q3E787	52 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	YGR121W-A	Q3E816	71 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	DNF2	Q12675	1612 aa		1.4	□□□□□ -2.19
VMA10	YHR039C-A	ACC1	Q00955	2233 aa	Known RBP	1.39	□□□□□ -2.19
VMA10	YHR039C-A	MRPL31	P14063	131 aa	Predicted RBP	1.39	□□□□□ -2.19
VMA10	YHR039C-A	YHR173C	P38864	112 aa		1.39	□□□□□ -2.19
VMA10	YHR039C-A	SPC1	P46965	94 aa		1.39	□□□□□ -2.19
VMA10	YHR039C-A	HIR3	P47171	1648 aa		1.39	□□□□□ -2.19
VMA10	YHR039C-A	CDC39	P25655	2108 aa	Known RBP	1.39	□□□□□ -2.19
VMA10	YHR039C-A	YAL065C	O13511	128 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	MRPL38	P35996	138 aa	Predicted RBP	1.38	□□□□□ -2.19
VMA10	YHR039C-A	YBL071C	P38185	102 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	SMX2	P40204	77 aa	Known RBP	1.38	□□□□□ -2.19
VMA10	YHR039C-A	MRX7	P53869	86 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	SED1	Q01589	338 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	IRC21	Q04772	201 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	YKL065W-A	Q2V2P2	73 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	COX19	Q3E731	98 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	GCN2	P15442	1659 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	VMR1	P38735	1592 aa		1.38	□□□□□ -2.19
VMA10	YHR039C-A	NUP192	P47054	1683 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	PFY1	P07274	126 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	YER188C-A	P0C0V2	99 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	QCR9	P22289	66 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	FPR2	P32472	135 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	MPC2	P38857	129 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	VPS55	P47111	140 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	SNA2	P56508	79 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	YMR007W	Q03675	126 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	YCL048W-A	Q2V2Q2	79 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	YLR285C-A	Q3E771	56 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	ATG2	P53855	1592 aa		1.37	□□□□□ -2.19
VMA10	YHR039C-A	URB1	P34241	1764 aa	Known RBP	1.36	□□□□□ -2.19
VMA10	YHR039C-A	YGL014C-A	P0C5N1	53 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU6	P0CE90	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU18	P0CE91	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU8	P0CE92	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU11	P0CE93	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	AIM4	P38305	123 aa	Predicted RBP	1.36	□□□□□ -2.19
VMA10	YHR039C-A	YSY6	P38374	65 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU13	P38725	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	SPI1	P40092	148 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU4	P53427	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU10	Q03050	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	YKL023C-A	Q2V2P3	75 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	YDR246W-A	Q3E763	66 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	PAU9	Q3E770	120 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	YGR035W-A	Q45U48	73 aa		1.36	□□□□□ -2.19
VMA10	YHR039C-A	HUA1	P40325	198 aa		1.35	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms