RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W MID2P36027 376 aa3.81□□□□□ -1.8
SHE10YGL228W YPR195CQ06594 109 aa3.81□□□□□ -1.8
SHE10YGL228W YLR363W-AQ3E747 85 aa3.81□□□□□ -1.8
SHE10YGL228W ELC1Q03071 99 aa3.8□□□□□ -1.8
SHE10YGL228W MHR1Q06630 226 aa3.8□□□□□ -1.8
SHE10YGL228W ADH1P00330 348 aaKnown RBP3.79□□□□□ -1.8
SHE10YGL228W RPL11AP0C0W9 174 aaKnown RBP3.79□□□□□ -1.8
SHE10YGL228W HAP3P13434 144 aa3.79□□□□□ -1.8
SHE10YGL228W TOA2P32774 122 aa3.79□□□□□ -1.8
SHE10YGL228W RPL11BQ3E757 174 aaPredicted RBP3.79□□□□□ -1.8
SHE10YGL228W YMR175W-AQ3E766 64 aa3.79□□□□□ -1.8
SHE10YGL228W MDN1Q12019 4910 aaKnown RBP3.79□□□□□ -1.8
SHE10YGL228W MRP10O75012 95 aa3.78□□□□□ -1.8
SHE10YGL228W QCR8P08525 94 aa3.78□□□□□ -1.8
SHE10YGL228W CWC27Q02770 301 aa3.78□□□□□ -1.8
SHE10YGL228W YBR182C-AQ8TGU6 64 aa3.78□□□□□ -1.8
SHE10YGL228W YAR023CD6VPM8 179 aa3.78□□□□□ -1.8
SHE10YGL228W PPT2Q12036 173 aa3.78□□□□□ -1.8
SHE10YGL228W CDC43P18898 376 aa3.77□□□□□ -1.81
SHE10YGL228W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SHE10YGL228W CWP2P43497 92 aa3.76□□□□□ -1.81
SHE10YGL228W YML079WQ03629 201 aa3.76□□□□□ -1.81
SHE10YGL228W YLL006W-AQ3E814 58 aa3.76□□□□□ -1.81
SHE10YGL228W MBF1O14467 151 aaKnown RBP3.75□□□□□ -1.81
SHE10YGL228W UBC11P52492 156 aa3.75□□□□□ -1.81
SHE10YGL228W YDL241WQ07738 123 aa3.75□□□□□ -1.81
SHE10YGL228W PAI3P01094 68 aa3.74□□□□□ -1.81
SHE10YGL228W YPR170W-BP0C5R9 85 aa3.74□□□□□ -1.81
SHE10YGL228W CPR1P14832 162 aaKnown RBP3.74□□□□□ -1.81
SHE10YGL228W ANB1P19211 157 aa3.74□□□□□ -1.81
SHE10YGL228W YER181CP40097 107 aa3.74□□□□□ -1.81
SHE10YGL228W SNA2P56508 79 aa3.74□□□□□ -1.81
SHE10YGL228W YLR296WQ05898 108 aa3.74□□□□□ -1.81
SHE10YGL228W UIP3P39547 235 aa3.73□□□□□ -1.81
SHE10YGL228W SMD1Q02260 146 aaPredicted RBP3.73□□□□□ -1.81
SHE10YGL228W AQY2P0CD90 149 aa3.73□□□□□ -1.81
SHE10YGL228W SMP1P38128 452 aa3.73□□□□□ -1.81
SHE10YGL228W YNL198CP40166 100 aa3.73□□□□□ -1.81
SHE10YGL228W MVB12P42939 101 aa3.73□□□□□ -1.81
SHE10YGL228W YKL023C-AQ2V2P3 75 aa3.73□□□□□ -1.81
SHE10YGL228W ARO2P28777 376 aaKnown RBP3.72□□□□□ -1.81
SHE10YGL228W YIA6P40556 373 aa3.72□□□□□ -1.81
SHE10YGL228W YIL102C-AQ2V2P5 75 aa3.72□□□□□ -1.81
SHE10YGL228W ABF2Q02486 183 aa3.71□□□□□ -1.82
SHE10YGL228W HPA2Q06592 156 aa3.71□□□□□ -1.82
SHE10YGL228W YDR029WQ12111 104 aa3.71□□□□□ -1.82
SHE10YGL228W YDR034C-AP0C289 58 aa3.7□□□□□ -1.82
SHE10YGL228W YFL019CP43576 117 aa3.7□□□□□ -1.82
SHE10YGL228W IGD1P43598 195 aa3.7□□□□□ -1.82
SHE10YGL228W RGM1Q00453 211 aa3.7□□□□□ -1.82
SHE10YGL228W LSM6Q06406 86 aaKnown RBP3.7□□□□□ -1.82
SHE10YGL228W LCL2Q08045 131 aa3.7□□□□□ -1.82
SHE10YGL228W YOR034C-AQ3E735 80 aa3.7□□□□□ -1.82
SHE10YGL228W RPL29P05747 59 aaPredicted RBP3.69□□□□□ -1.82
SHE10YGL228W YBL039W-BP0C268 59 aa3.69□□□□□ -1.82
SHE10YGL228W YHR130CP38834 111 aa3.69□□□□□ -1.82
SHE10YGL228W PEX22P39718 180 aa3.69□□□□□ -1.82
SHE10YGL228W YOR020W-AQ3E824 90 aa3.69□□□□□ -1.82
SHE10YGL228W YPL229WQ99395 206 aa3.69□□□□□ -1.82
SHE10YGL228W NHP2P32495 156 aaPredicted RBP3.68□□□□□ -1.82
SHE10YGL228W AIM19P40502 157 aa3.68□□□□□ -1.82
SHE10YGL228W KNH1P50112 268 aa3.68□□□□□ -1.82
SHE10YGL228W GAT4P40569 121 aa3.67□□□□□ -1.82
SHE10YGL228W YAR1P46683 200 aa3.67□□□□□ -1.82
SHE10YGL228W IRC21Q04772 201 aa3.67□□□□□ -1.82
SHE10YGL228W COX10P21592 462 aa3.66□□□□□ -1.82
SHE10YGL228W YNL162W-AQ3E7A8 72 aa3.66□□□□□ -1.82
SHE10YGL228W Q0032Q9ZZX7 96 aa3.66□□□□□ -1.82
SHE10YGL228W ECM12O13529 151 aa3.65□□□□□ -1.82
SHE10YGL228W HYP2P23301 157 aaKnown RBP3.65□□□□□ -1.82
SHE10YGL228W UBC4P15731 148 aa3.64□□□□□ -1.83
SHE10YGL228W ICY1Q04329 127 aa3.64□□□□□ -1.83
SHE10YGL228W YBR121C-AP0C5L4 52 aa3.64□□□□□ -1.83
SHE10YGL228W MRPL24P36525 258 aaPredicted RBP3.64□□□□□ -1.83
SHE10YGL228W HUR1P45820 110 aa3.64□□□□□ -1.83
SHE10YGL228W YGL041C-BQ3E750 60 aa3.64□□□□□ -1.83
SHE10YGL228W YLR307C-AQ3E825 87 aa3.64□□□□□ -1.83
SHE10YGL228W RPP2AP05319 106 aaKnown RBP3.63□□□□□ -1.83
SHE10YGL228W YKL183C-AQ3E765 70 aa3.62□□□□□ -1.83
SHE10YGL228W YLR236CA0A023PZG4 107 aa3.61□□□□□ -1.83
SHE10YGL228W MPC3P53311 146 aa3.61□□□□□ -1.83
SHE10YGL228W YGL193CP53097 103 aa3.61□□□□□ -1.83
SHE10YGL228W YBR230W-AQ3E762 66 aa3.61□□□□□ -1.83
SHE10YGL228W RPL26AP05743 127 aaKnown RBP3.6□□□□□ -1.83
SHE10YGL228W RPS28BP0C0X0 67 aaKnown RBP3.6□□□□□ -1.83
SHE10YGL228W MSA2P36157 363 aa3.6□□□□□ -1.83
SHE10YGL228W DSE2P38844 325 aa3.6□□□□□ -1.83
SHE10YGL228W RPL26BP53221 127 aaKnown RBP3.6□□□□□ -1.83
SHE10YGL228W RPS28AQ3E7X9 67 aaPredicted RBP3.6□□□□□ -1.83
SHE10YGL228W YLR156WP0CE96 114 aa3.58□□□□□ -1.84
SHE10YGL228W YLR159WP0CE97 114 aa3.58□□□□□ -1.84
SHE10YGL228W YLR161WP0CE98 114 aa3.58□□□□□ -1.84
SHE10YGL228W YPL257WQ08974 193 aa3.58□□□□□ -1.84
SHE10YGL228W YNL042W-BQ3E7Z2 85 aa3.58□□□□□ -1.84
SHE10YGL228W YJL127C-BQ3E828 52 aa3.58□□□□□ -1.84
SHE10YGL228W FYV5P25585 152 aa3.58□□□□□ -1.84
SHE10YGL228W YPL080CQ02826 108 aa3.57□□□□□ -1.84
SHE10YGL228W LCL1Q02786 101 aa3.56□□□□□ -1.84
SHE10YGL228W MMS2P53152 137 aa3.56□□□□□ -1.84
SHE10YGL228W GIS2P53849 153 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms