RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YMR090WQ04304 227 aaKnown RBP1.62□□□□□ -2.15
MSH4YFL003C MIC10Q96VH5 97 aa1.62□□□□□ -2.15
MSH4YFL003C AIM4P38305 123 aaPredicted RBP1.61□□□□□ -2.15
MSH4YFL003C GTT1P40582 234 aa1.61□□□□□ -2.15
MSH4YFL003C PFY1P07274 126 aa1.61□□□□□ -2.15
MSH4YFL003C AQY2P0CD90 149 aa1.61□□□□□ -2.15
MSH4YFL003C SNN1P48232 102 aa1.61□□□□□ -2.15
MSH4YFL003C PRM3Q08931 133 aa1.61□□□□□ -2.15
MSH4YFL003C HUR1P45820 110 aa1.6□□□□□ -2.15
MSH4YFL003C RPL22BP56628 122 aaKnown RBP1.6□□□□□ -2.15
MSH4YFL003C YJL197C-AP0C5P0 93 aa1.6□□□□□ -2.15
MSH4YFL003C UBC4P15731 148 aa1.6□□□□□ -2.15
MSH4YFL003C YHL037CP38733 133 aa1.6□□□□□ -2.15
MSH4YFL003C COX23P38824 151 aa1.6□□□□□ -2.15
MSH4YFL003C PAU19P0CE85 124 aa1.59□□□□□ -2.15
MSH4YFL003C PAU3P25610 124 aa1.59□□□□□ -2.15
MSH4YFL003C COA4Q05809 96 aa1.59□□□□□ -2.15
MSH4YFL003C YOS1Q3E834 85 aa1.59□□□□□ -2.15
MSH4YFL003C VMA21P41806 77 aa1.59□□□□□ -2.16
MSH4YFL003C SWC7Q06707 132 aa1.59□□□□□ -2.16
MSH4YFL003C YHR212W-AP0CX91 67 aa1.58□□□□□ -2.16
MSH4YFL003C COA6Q3E846 104 aa1.58□□□□□ -2.16
MSH4YFL003C YIR020CP40575 100 aa1.58□□□□□ -2.16
MSH4YFL003C CYB5P40312 120 aa1.57□□□□□ -2.16
MSH4YFL003C KSH1Q8TGJ3 72 aa1.57□□□□□ -2.16
MSH4YFL003C YSF3P0C074 85 aaPredicted RBP1.56□□□□□ -2.16
MSH4YFL003C HMRA2P0CY13 119 aa1.56□□□□□ -2.16
MSH4YFL003C YLR285C-AQ3E771 56 aa1.56□□□□□ -2.16
MSH4YFL003C RPL22AP05749 121 aaKnown RBP1.56□□□□□ -2.16
MSH4YFL003C YIL163CP40448 117 aa1.56□□□□□ -2.16
MSH4YFL003C POR2P40478 281 aa1.56□□□□□ -2.16
MSH4YFL003C PAU16P35994 123 aa1.55□□□□□ -2.16
MSH4YFL003C PAU15P40585 124 aa1.55□□□□□ -2.16
MSH4YFL003C IRC21Q04772 201 aa1.55□□□□□ -2.16
MSH4YFL003C YLR363W-AQ3E747 85 aa1.54□□□□□ -2.16
MSH4YFL003C FIT3Q08907 204 aa1.54□□□□□ -2.16
MSH4YFL003C YCR075W-AQ3E830 75 aa1.54□□□□□ -2.16
MSH4YFL003C RSM19P53733 91 aaPredicted RBP1.53□□□□□ -2.16
MSH4YFL003C MIC27P50945 234 aa1.52□□□□□ -2.17
MSH4YFL003C MIX14Q04341 121 aa1.52□□□□□ -2.17
MSH4YFL003C ENV10Q99382 181 aa1.52□□□□□ -2.17
MSH4YFL003C YIL086CP40503 102 aa1.52□□□□□ -2.17
MSH4YFL003C EMC5P40540 141 aa1.52□□□□□ -2.17
MSH4YFL003C YNL122CP53921 115 aaPredicted RBP1.52□□□□□ -2.17
MSH4YFL003C YBR013CP38215 129 aa1.51□□□□□ -2.17
MSH4YFL003C CCW12Q12127 133 aa1.51□□□□□ -2.17
MSH4YFL003C SRB6P32570 121 aa1.51□□□□□ -2.17
MSH4YFL003C MSL1P40567 111 aaPredicted RBP1.51□□□□□ -2.17
MSH4YFL003C LSM6Q06406 86 aaKnown RBP1.5□□□□□ -2.17
MSH4YFL003C YDR029WQ12111 104 aa1.5□□□□□ -2.17
MSH4YFL003C YAR064WP39563 99 aa1.5□□□□□ -2.17
MSH4YFL003C SCP1Q08873 200 aa1.5□□□□□ -2.17
MSH4YFL003C YGL194C-AQ2V2P6 80 aa1.5□□□□□ -2.17
MSH4YFL003C Q0297Q9ZZV8 51 aa1.5□□□□□ -2.17
MSH4YFL003C HMRA1P0CY11 126 aa1.49□□□□□ -2.17
MSH4YFL003C YCR001WP25347 104 aa1.49□□□□□ -2.17
MSH4YFL003C YHR138CP38841 114 aaPredicted RBP1.49□□□□□ -2.17
MSH4YFL003C YJL009WP47078 108 aa1.49□□□□□ -2.17
MSH4YFL003C RRT15Q3E811 62 aa1.49□□□□□ -2.17
MSH4YFL003C YOR032W-AQ8TGS1 66 aa1.49□□□□□ -2.17
MSH4YFL003C YOL013W-AP0C272 63 aaPredicted RBP1.49□□□□□ -2.17
MSH4YFL003C PAU5P43575 122 aa1.49□□□□□ -2.17
MSH4YFL003C YGL041C-BQ3E750 60 aa1.48□□□□□ -2.17
MSH4YFL003C SLH1P53327 1967 aaKnown RBP1.48□□□□□ -2.17
MSH4YFL003C SNU13P39990 126 aaKnown RBP1.48□□□□□ -2.17
MSH4YFL003C VPS55P47111 140 aa1.47□□□□□ -2.17
MSH4YFL003C CCW14O13547 238 aa1.47□□□□□ -2.17
MSH4YFL003C RPS22AP0C0W1 130 aaKnown RBP1.47□□□□□ -2.17
MSH4YFL003C YOR072WQ08486 104 aa1.47□□□□□ -2.17
MSH4YFL003C RPS22BQ3E7Y3 130 aaKnown RBP1.46□□□□□ -2.18
MSH4YFL003C BLM10P43583 2143 aa1.46□□□□□ -2.18
MSH4YFL003C ICS3P47034 131 aa1.46□□□□□ -2.18
MSH4YFL003C YOL118CQ08259 102 aa1.46□□□□□ -2.18
MSH4YFL003C YCL048W-AQ2V2Q2 79 aa1.46□□□□□ -2.18
MSH4YFL003C MGR2Q02889 113 aa1.45□□□□□ -2.18
MSH4YFL003C LCL2Q08045 131 aa1.45□□□□□ -2.18
MSH4YFL003C YGR240C-AQ3E786 66 aa1.45□□□□□ -2.18
MSH4YFL003C GCV3P39726 170 aaPredicted RBP1.45□□□□□ -2.18
MSH4YFL003C MRPS12P53732 153 aa1.45□□□□□ -2.18
MSH4YFL003C YCR095W-AQ3E787 52 aa1.45□□□□□ -2.18
MSH4YFL003C MRPL31P14063 131 aaPredicted RBP1.44□□□□□ -2.18
MSH4YFL003C ROX3P25046 220 aa1.44□□□□□ -2.18
MSH4YFL003C YHL005CP38752 130 aa1.44□□□□□ -2.18
MSH4YFL003C YIL102CP40488 101 aa1.44□□□□□ -2.18
MSH4YFL003C MVB12P42939 101 aa1.44□□□□□ -2.18
MSH4YFL003C SUS1Q6WNK7 96 aa1.44□□□□□ -2.18
MSH4YFL003C ECM12O13529 151 aa1.43□□□□□ -2.18
MSH4YFL003C YMR007WQ03675 126 aa1.43□□□□□ -2.18
MSH4YFL003C HUG1Q6Q5K6 68 aa1.43□□□□□ -2.18
MSH4YFL003C YDR042CQ03205 200 aa1.42□□□□□ -2.18
MSH4YFL003C YMR082CQ04276 118 aa1.42□□□□□ -2.18
MSH4YFL003C SNA2P56508 79 aa1.42□□□□□ -2.18
MSH4YFL003C IMP2P46972 177 aa1.41□□□□□ -2.18
MSH4YFL003C NHP10Q03435 203 aa1.41□□□□□ -2.18
MSH4YFL003C HHY1P39982 102 aa1.41□□□□□ -2.18
MSH4YFL003C RSM18P40033 138 aa1.41□□□□□ -2.18
MSH4YFL003C LCL1Q02786 101 aa1.41□□□□□ -2.18
MSH4YFL003C PAU6P0CE90 120 aa1.4□□□□□ -2.18
MSH4YFL003C PAU18P0CE91 120 aa1.4□□□□□ -2.18
MSH4YFL003C HUA1P40325 198 aa1.4□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms