RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W COA3Q3E7B2 85 aa2.98□□□□□ -1.93
CHD1YER164W WWM1P43582 211 aaKnown RBP2.97□□□□□ -1.93
CHD1YER164W YNL190WP53872 204 aa2.97□□□□□ -1.93
CHD1YER164W UBC4P15731 148 aa2.97□□□□□ -1.93
CHD1YER164W YER187WP40102 141 aa2.97□□□□□ -1.93
CHD1YER164W MIX17Q03667 156 aa2.97□□□□□ -1.93
CHD1YER164W YCL048W-AQ2V2Q2 79 aa2.97□□□□□ -1.93
CHD1YER164W YPL038W-AQ3E7B4 63 aa2.97□□□□□ -1.93
CHD1YER164W YER039C-AP0CD97 72 aa2.97□□□□□ -1.93
CHD1YER164W YIR020CP40575 100 aa2.97□□□□□ -1.93
CHD1YER164W HAL1Q01766 294 aa2.97□□□□□ -1.93
CHD1YER164W COX12Q01519 83 aa2.96□□□□□ -1.93
CHD1YER164W TMC1Q08422 150 aaPredicted RBP2.96□□□□□ -1.94
CHD1YER164W YKR045CP36138 183 aa2.96□□□□□ -1.94
CHD1YER164W YAR029WP39549 74 aa2.96□□□□□ -1.94
CHD1YER164W YLR112WQ12130 139 aa2.96□□□□□ -1.94
CHD1YER164W SPI1P40092 148 aa2.96□□□□□ -1.94
CHD1YER164W YBR126W-AQ8TGU7 68 aa2.96□□□□□ -1.94
CHD1YER164W YHR213WP0CI67 198 aa2.95□□□□□ -1.94
CHD1YER164W MOT3P54785 490 aaKnown RBP2.95□□□□□ -1.94
CHD1YER164W SHH4Q06236 168 aa2.95□□□□□ -1.94
CHD1YER164W ATP20Q12233 115 aa2.95□□□□□ -1.94
CHD1YER164W YDR381C-AQ3E6R5 114 aa2.95□□□□□ -1.94
CHD1YER164W YPL278CQ08990 100 aa2.95□□□□□ -1.94
CHD1YER164W YNL046WP53956 172 aa2.95□□□□□ -1.94
CHD1YER164W YMR317WQ04893 1140 aa2.95□□□□□ -1.94
CHD1YER164W YOL160WQ08321 113 aa2.95□□□□□ -1.94
CHD1YER164W AGA1P32323 725 aa2.94□□□□□ -1.94
CHD1YER164W SUT1P53032 299 aaKnown RBP2.94□□□□□ -1.94
CHD1YER164W YHL037CP38733 133 aa2.94□□□□□ -1.94
CHD1YER164W YML122CQ03207 126 aa2.94□□□□□ -1.94
CHD1YER164W SVP26P38869 228 aa2.94□□□□□ -1.94
CHD1YER164W UBC5P15732 148 aa2.94□□□□□ -1.94
CHD1YER164W ALG13P53178 202 aa2.93□□□□□ -1.94
CHD1YER164W YNR077CP53758 84 aa2.93□□□□□ -1.94
CHD1YER164W PBP4Q07362 185 aaKnown RBP2.93□□□□□ -1.94
CHD1YER164W CRC1Q12289 327 aa2.93□□□□□ -1.94
CHD1YER164W VTC1P40046 129 aaRIP-Chip data2.93□□□□□ -1.94not detected
CHD1YER164W YDR119W-AQ2V2P9 66 aa2.93□□□□□ -1.94
CHD1YER164W YOR381W-AQ3E804 55 aa2.93□□□□□ -1.94
CHD1YER164W YGR025WP53216 100 aa2.93□□□□□ -1.94
CHD1YER164W ICY1Q04329 127 aa2.93□□□□□ -1.94
CHD1YER164W YER135CP40082 130 aa2.92□□□□□ -1.94
CHD1YER164W ERI1P62651 68 aaKnown RBP2.92□□□□□ -1.94
CHD1YER164W CCW12Q12127 133 aa2.92□□□□□ -1.94
CHD1YER164W RPS28BP0C0X0 67 aaKnown RBP2.92□□□□□ -1.94
CHD1YER164W YLR156WP0CE96 114 aa2.92□□□□□ -1.94
CHD1YER164W YLR159WP0CE97 114 aa2.92□□□□□ -1.94
CHD1YER164W YLR161WP0CE98 114 aa2.92□□□□□ -1.94
CHD1YER164W ARC15P40518 154 aaRIP-Chip data2.92□□□□□ -1.94not detected
CHD1YER164W IMP2P46972 177 aa2.92□□□□□ -1.94
CHD1YER164W SPG4Q04438 115 aa2.92□□□□□ -1.94
CHD1YER164W RPS28AQ3E7X9 67 aaPredicted RBP2.92□□□□□ -1.94
CHD1YER164W RSM19P53733 91 aaPredicted RBP2.92□□□□□ -1.94
CHD1YER164W RGM1Q00453 211 aa2.92□□□□□ -1.94
CHD1YER164W YEL008WP40001 126 aa2.92□□□□□ -1.94
CHD1YER164W ATP18P81450 59 aa2.92□□□□□ -1.94
CHD1YER164W AIR2Q12476 344 aaKnown RBP2.92□□□□□ -1.94
CHD1YER164W YJR146WP47174 117 aa2.91□□□□□ -1.94
CHD1YER164W YBR200W-AQ3E755 54 aa2.91□□□□□ -1.94
CHD1YER164W YNL277W-AQ3E7Z0 62 aa2.91□□□□□ -1.94
CHD1YER164W YLL006W-AQ3E814 58 aa2.91□□□□□ -1.94
CHD1YER164W YOL085CQ99345 113 aa2.91□□□□□ -1.94
CHD1YER164W RSM18P40033 138 aa2.91□□□□□ -1.94
CHD1YER164W YFL019CP43576 117 aa2.91□□□□□ -1.94
CHD1YER164W YOR034C-AQ3E735 80 aa2.91□□□□□ -1.94
CHD1YER164W Q0032Q9ZZX7 96 aa2.91□□□□□ -1.94
CHD1YER164W YBR144CP34215 104 aa2.9□□□□□ -1.94
CHD1YER164W SFT1P43682 97 aa2.9□□□□□ -1.94
CHD1YER164W MPC3P53311 146 aa2.9□□□□□ -1.94
CHD1YER164W SRL1Q08673 210 aa2.9□□□□□ -1.94
CHD1YER164W RPR2P40571 144 aa2.9□□□□□ -1.95
CHD1YER164W YPR010C-AA5Z2X5 72 aa2.9□□□□□ -1.95
CHD1YER164W YFR035CP43608 114 aa2.9□□□□□ -1.95
CHD1YER164W YLR412C-AQ3E742 68 aa2.9□□□□□ -1.95
CHD1YER164W HUB1Q6Q546 73 aa2.9□□□□□ -1.95
CHD1YER164W YBR182C-AQ8TGU6 64 aa2.9□□□□□ -1.95
CHD1YER164W OST5Q92316 86 aa2.89□□□□□ -1.95
CHD1YER164W YLR236CA0A023PZG4 107 aa2.88□□□□□ -1.95
CHD1YER164W RPS11AP0CX47 156 aaKnown RBP2.88□□□□□ -1.95
CHD1YER164W RPS11BP0CX48 156 aaKnown RBP2.88□□□□□ -1.95
CHD1YER164W MRPS8Q03799 155 aa2.88□□□□□ -1.95
CHD1YER164W YAR023CD6VPM8 179 aa2.88□□□□□ -1.95
CHD1YER164W AQY2P0CD90 149 aa2.88□□□□□ -1.95
CHD1YER164W SAP30P38429 201 aa2.88□□□□□ -1.95
CHD1YER164W YHL005CP38752 130 aa2.88□□□□□ -1.95
CHD1YER164W KRE9P39005 276 aa2.88□□□□□ -1.95
CHD1YER164W HHF1P02309 103 aaKnown RBP2.88□□□□□ -1.95
CHD1YER164W VAM10Q08474 114 aa2.88□□□□□ -1.95
CHD1YER164W YNL146C-AQ3E7Z1 64 aa2.88□□□□□ -1.95
CHD1YER164W YBL039W-BP0C268 59 aa2.87□□□□□ -1.95
CHD1YER164W YEL067CP39978 195 aa2.87□□□□□ -1.95
CHD1YER164W RPL36BO14455 100 aaKnown RBP2.87□□□□□ -1.95
CHD1YER164W RPL36AP05745 100 aaPredicted RBP2.87□□□□□ -1.95
CHD1YER164W HOR7Q05827 59 aa2.87□□□□□ -1.95
CHD1YER164W YMR175W-AQ3E766 64 aa2.87□□□□□ -1.95
CHD1YER164W YCR095W-AQ3E787 52 aa2.87□□□□□ -1.95
CHD1YER164W YJL027CP47063 138 aaPredicted RBP2.86□□□□□ -1.95
CHD1YER164W YKL065W-AQ2V2P2 73 aa2.86□□□□□ -1.95
CHD1YER164W KSH1Q8TGJ3 72 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms