RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C MED11Q99278 115 aa0.49□□□□□ -2.33
SWI4YER111C MRPL31P14063 131 aaPredicted RBP0.49□□□□□ -2.33
SWI4YER111C UBC4P15731 148 aa0.49□□□□□ -2.33
SWI4YER111C COX23P38824 151 aa0.49□□□□□ -2.33
SWI4YER111C MIC27P50945 234 aa0.49□□□□□ -2.33
SWI4YER111C DAD1Q12248 94 aa0.49□□□□□ -2.33
SWI4YER111C YCL048W-AQ2V2Q2 79 aa0.49□□□□□ -2.33
SWI4YER111C YIL046W-AQ3E7Z4 54 aa0.49□□□□□ -2.33
SWI4YER111C YHR130CP38834 111 aa0.49□□□□□ -2.33
SWI4YER111C YMR103CQ04436 120 aa0.49□□□□□ -2.33
SWI4YER111C LCL2Q08045 131 aa0.49□□□□□ -2.33
SWI4YER111C YDR524C-BQ3E6R4 66 aa0.49□□□□□ -2.33
SWI4YER111C SEC16P48415 2195 aaKnown RBP0.48□□□□□ -2.33
SWI4YER111C CCW14O13547 238 aa0.48□□□□□ -2.33
SWI4YER111C PCC1Q3E833 88 aa0.48□□□□□ -2.33
SWI4YER111C ADK1P07170 222 aaKnown RBP0.47□□□□□ -2.33
SWI4YER111C YER137CP40083 148 aaKnown RBP0.47□□□□□ -2.33
SWI4YER111C VPS55P47111 140 aa0.47□□□□□ -2.33
SWI4YER111C SNN1P48232 102 aa0.47□□□□□ -2.33
SWI4YER111C YLR363W-AQ3E747 85 aa0.47□□□□□ -2.33
SWI4YER111C HUG1Q6Q5K6 68 aa0.47□□□□□ -2.33
SWI4YER111C YCR101CP25607 182 aa0.47□□□□□ -2.33
SWI4YER111C PAU2P32612 120 aa0.47□□□□□ -2.33
SWI4YER111C HHY1P39982 102 aa0.47□□□□□ -2.33
SWI4YER111C VMA21P41806 77 aa0.47□□□□□ -2.33
SWI4YER111C YGL041C-BQ3E750 60 aa0.47□□□□□ -2.33
SWI4YER111C CDC39P25655 2108 aaKnown RBP0.47□□□□□ -2.33
SWI4YER111C LHP1P33399 275 aaKnown RBP0.47□□□□□ -2.33
SWI4YER111C PAU24P38155 120 aa0.47□□□□□ -2.33
SWI4YER111C YMR141CP40211 102 aa0.47□□□□□ -2.33
SWI4YER111C YMR090WQ04304 227 aaKnown RBP0.47□□□□□ -2.33
SWI4YER111C YGR240C-AQ3E786 66 aa0.47□□□□□ -2.33
SWI4YER111C MIC10Q96VH5 97 aa0.47□□□□□ -2.33
SWI4YER111C MIX14Q04341 121 aa0.46□□□□□ -2.34
SWI4YER111C BEM2P39960 2167 aaKnown RBP0.46□□□□□ -2.34
SWI4YER111C YMR321CQ04898 105 aa0.46□□□□□ -2.34
SWI4YER111C YLR285C-AQ3E771 56 aa0.46□□□□□ -2.34
SWI4YER111C PAU19P0CE85 124 aa0.46□□□□□ -2.34
SWI4YER111C PAU3P25610 124 aa0.46□□□□□ -2.34
SWI4YER111C MRPS12P53732 153 aa0.46□□□□□ -2.34
SWI4YER111C PRP8P33334 2413 aaKnown RBP0.45□□□□□ -2.34
SWI4YER111C YHL005CP38752 130 aa0.45□□□□□ -2.34
SWI4YER111C YJR128WP47162 119 aa0.45□□□□□ -2.34
SWI4YER111C YDR210WQ03482 75 aa0.45□□□□□ -2.34
SWI4YER111C YHR138CP38841 114 aaPredicted RBP0.45□□□□□ -2.34
SWI4YER111C CYB5P40312 120 aa0.45□□□□□ -2.34
SWI4YER111C YOR289WQ12012 251 aaPredicted RBP0.45□□□□□ -2.34
SWI4YER111C FYV7Q12247 151 aa0.45□□□□□ -2.34
SWI4YER111C KSH1Q8TGJ3 72 aa0.45□□□□□ -2.34
SWI4YER111C MVB12P42939 101 aa0.44□□□□□ -2.34
SWI4YER111C YOR034C-AQ3E735 80 aa0.44□□□□□ -2.34
SWI4YER111C ENV10Q99382 181 aa0.44□□□□□ -2.34
SWI4YER111C PAU16P35994 123 aa0.44□□□□□ -2.34
SWI4YER111C PAU15P40585 124 aa0.44□□□□□ -2.34
SWI4YER111C LCL1Q02786 101 aa0.44□□□□□ -2.34
SWI4YER111C COX19Q3E731 98 aa0.44□□□□□ -2.34
SWI4YER111C GCN1P33892 2672 aaKnown RBP0.44□□□□□ -2.34
SWI4YER111C BUD23P25627 275 aaPredicted RBP0.44□□□□□ -2.34
SWI4YER111C YOL118CQ08259 102 aa0.43□□□□□ -2.34
SWI4YER111C YER188C-AP0C0V2 99 aa0.43□□□□□ -2.34
SWI4YER111C LSM6Q06406 86 aaKnown RBP0.43□□□□□ -2.34
SWI4YER111C COX12Q01519 83 aa0.42□□□□□ -2.34
SWI4YER111C YLR255CO13574 117 aa0.42□□□□□ -2.34
SWI4YER111C HMRA2P0CY13 119 aa0.42□□□□□ -2.34
SWI4YER111C RSM19P53733 91 aaPredicted RBP0.42□□□□□ -2.34
SWI4YER111C IRA1P18963 3092 aa0.41□□□□□ -2.34
SWI4YER111C YIL086CP40503 102 aa0.41□□□□□ -2.34
SWI4YER111C IMP2P46972 177 aa0.41□□□□□ -2.34
SWI4YER111C YLR307C-AQ3E825 87 aa0.41□□□□□ -2.34
SWI4YER111C YLR157W-EP0CF00 54 aa0.4□□□□□ -2.35
SWI4YER111C SRB6P32570 121 aa0.4□□□□□ -2.35
SWI4YER111C ZEO1Q08245 113 aa0.4□□□□□ -2.35
SWI4YER111C YPL225WQ08971 146 aaKnown RBP0.4□□□□□ -2.35
SWI4YER111C MPC2P38857 129 aa0.39□□□□□ -2.35
SWI4YER111C YPL038W-AQ3E7B4 63 aa0.39□□□□□ -2.35
SWI4YER111C MRPL38P35996 138 aaPredicted RBP0.39□□□□□ -2.35
SWI4YER111C YDR010CQ12426 110 aa0.39□□□□□ -2.35
SWI4YER111C YCR095W-AQ3E787 52 aa0.39□□□□□ -2.35
SWI4YER111C ROX3P25046 220 aa0.39□□□□□ -2.35
SWI4YER111C EMC5P40540 141 aa0.39□□□□□ -2.35
SWI4YER111C YBR072C-AQ3E794 53 aa0.39□□□□□ -2.35
SWI4YER111C SHU1P38751 150 aa0.38□□□□□ -2.35
SWI4YER111C GCV3P39726 170 aaPredicted RBP0.38□□□□□ -2.35
SWI4YER111C PAU5P43575 122 aa0.38□□□□□ -2.35
SWI4YER111C FMP27Q06179 2628 aa0.38□□□□□ -2.35
SWI4YER111C RPS11AP0CX47 156 aaKnown RBP0.37□□□□□ -2.35
SWI4YER111C RPS11BP0CX48 156 aaKnown RBP0.37□□□□□ -2.35
SWI4YER111C HMRA1P0CY11 126 aa0.37□□□□□ -2.35
SWI4YER111C MRP17P28778 131 aa0.37□□□□□ -2.35
SWI4YER111C YBR292CP38357 123 aa0.37□□□□□ -2.35
SWI4YER111C AIM19P40502 157 aa0.37□□□□□ -2.35
SWI4YER111C AUA1P32450 94 aa0.37□□□□□ -2.35
SWI4YER111C YDR042CQ03205 200 aa0.37□□□□□ -2.35
SWI4YER111C YMR082CQ04276 118 aa0.37□□□□□ -2.35
SWI4YER111C ICY1Q04329 127 aa0.37□□□□□ -2.35
SWI4YER111C TRA1P38811 3744 aa0.37□□□□□ -2.35
SWI4YER111C SNA2P56508 79 aa0.36□□□□□ -2.35
SWI4YER111C RRT15Q3E811 62 aa0.36□□□□□ -2.35
SWI4YER111C MSL1P40567 111 aaPredicted RBP0.36□□□□□ -2.35
SWI4YER111C MRX7P53869 86 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms