RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MLP1Q02455 1875 aaKnown RBP0.33□□□□□ -2.36
SMB1YER029C LTE1P07866 1435 aa0.33□□□□□ -2.36
SMB1YER029C TY1B-LR3P0C2I6 1755 aaKnown RBP0.33□□□□□ -2.36
SMB1YER029C TY2B-LR1P0C2J3 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-FP0CX63 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-GR2P0CX64 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-CP25384 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-DR2Q03494 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY1B-DR1Q03855 1755 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-DR3Q07791 1770 aaKnown RBP0.33□□□□□ -2.36
SMB1YER029C TY2B-OR1Q12113 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-DR1Q12472 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-BQ12491 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY2B-OR2Q12501 1770 aa0.33□□□□□ -2.36
SMB1YER029C TY1B-DR3Q99231 1755 aa0.33□□□□□ -2.36
SMB1YER029C YHR173CP38864 112 aa0.33□□□□□ -2.36
SMB1YER029C AIM19P40502 157 aa0.33□□□□□ -2.36
SMB1YER029C PAU4P53427 120 aa0.33□□□□□ -2.36
SMB1YER029C YDR210WQ03482 75 aa0.33□□□□□ -2.36
SMB1YER029C ICY1Q04329 127 aa0.33□□□□□ -2.36
SMB1YER029C YNR034W-AQ3E841 98 aa0.33□□□□□ -2.36
SMB1YER029C ESP1Q03018 1630 aa0.33□□□□□ -2.36
SMB1YER029C POL1P13382 1468 aa0.33□□□□□ -2.36
SMB1YER029C TY1B-NL2Q99337 1749 aaKnown RBP0.33□□□□□ -2.36
SMB1YER029C TY1B-DR5P0C2I2 1755 aa0.32□□□□□ -2.36
SMB1YER029C TY1B-PR1P0C2I9 1755 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C TY1B-JR1P47098 1755 aa0.32□□□□□ -2.36
SMB1YER029C TY1B-ML2Q03434 1755 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C TY1B-ER1Q03612 1755 aa0.32□□□□□ -2.36
SMB1YER029C TY1B-ER2Q03619 1755 aa0.32□□□□□ -2.36
SMB1YER029C TY1B-ML1Q04711 1755 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C TY1B-LR1Q12088 1755 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C TY1B-GR2Q12269 1755 aa0.32□□□□□ -2.36
SMB1YER029C TY1B-OLQ12273 1755 aa0.32□□□□□ -2.36
SMB1YER029C YLR255CO13574 117 aa0.32□□□□□ -2.36
SMB1YER029C YHR214C-DP0CX93 97 aa0.32□□□□□ -2.36
SMB1YER029C NHP2P32495 156 aaPredicted RBP0.32□□□□□ -2.36
SMB1YER029C RPA12P32529 125 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C YBR292CP38357 123 aa0.32□□□□□ -2.36
SMB1YER029C MPC2P38857 129 aa0.32□□□□□ -2.36
SMB1YER029C BSC4P53841 131 aa0.32□□□□□ -2.36
SMB1YER029C YDR042CQ03205 200 aa0.32□□□□□ -2.36
SMB1YER029C SCP1Q08873 200 aa0.32□□□□□ -2.36
SMB1YER029C COX19Q3E731 98 aa0.32□□□□□ -2.36
SMB1YER029C YBR072C-AQ3E794 53 aa0.32□□□□□ -2.36
SMB1YER029C APC1P53886 1748 aa0.32□□□□□ -2.36
SMB1YER029C XRN1P22147 1528 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C UTP10P42945 1769 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C POL2P21951 2222 aaKnown RBP0.32□□□□□ -2.36
SMB1YER029C MON2P48563 1636 aaPredicted RBP0.31□□□□□ -2.36
SMB1YER029C FAS2P19097 1887 aaKnown RBP0.31□□□□□ -2.36
SMB1YER029C MMS22Q06164 1454 aa0.31□□□□□ -2.36
SMB1YER029C SNF2P22082 1703 aa0.31□□□□□ -2.36
SMB1YER029C RPS11AP0CX47 156 aaKnown RBP0.31□□□□□ -2.36
SMB1YER029C RPS11BP0CX48 156 aaKnown RBP0.31□□□□□ -2.36
SMB1YER029C AUA1P32450 94 aa0.31□□□□□ -2.36
SMB1YER029C FPR2P32472 135 aa0.31□□□□□ -2.36
SMB1YER029C MRPL38P35996 138 aaPredicted RBP0.31□□□□□ -2.36
SMB1YER029C PDX3P38075 228 aaKnown RBP0.31□□□□□ -2.36
SMB1YER029C YMR082CQ04276 118 aa0.31□□□□□ -2.36
SMB1YER029C YDR010CQ12426 110 aa0.31□□□□□ -2.36
SMB1YER029C Q0032Q9ZZX7 96 aa0.31□□□□□ -2.36
SMB1YER029C HKR1P41809 1802 aa0.31□□□□□ -2.36
SMB1YER029C TAO3P40468 2376 aa0.31□□□□□ -2.36
SMB1YER029C YSP2Q06681 1438 aa0.3□□□□□ -2.36
SMB1YER029C RPO21P04050 1733 aaKnown RBP0.3□□□□□ -2.36
SMB1YER029C FKS3Q04952 1785 aa0.3□□□□□ -2.36
SMB1YER029C SIN3P22579 1536 aa0.3□□□□□ -2.36
SMB1YER029C COX7P10174 60 aa0.3□□□□□ -2.36
SMB1YER029C PAU23Q07987 124 aa0.3□□□□□ -2.36
SMB1YER029C PAU17Q12370 124 aa0.3□□□□□ -2.36
SMB1YER029C YOL164W-AQ3E7A5 60 aa0.3□□□□□ -2.36
SMB1YER029C YNL042W-BQ3E7Z2 85 aa0.3□□□□□ -2.36
SMB1YER029C DOP1Q03921 1698 aa0.3□□□□□ -2.36
SMB1YER029C RPC10P40422 70 aa0.29□□□□□ -2.36
SMB1YER029C CWP2P43497 92 aa0.29□□□□□ -2.36
SMB1YER029C RPL38P49167 78 aaKnown RBP0.29□□□□□ -2.36
SMB1YER029C ATP18P81450 59 aa0.29□□□□□ -2.36
SMB1YER029C SGF11Q03067 99 aa0.29□□□□□ -2.36
SMB1YER029C YOR105WQ08504 108 aa0.29□□□□□ -2.36
SMB1YER029C YOR343CQ12484 108 aa0.29□□□□□ -2.36
SMB1YER029C YBR201C-AQ2V2Q3 67 aa0.29□□□□□ -2.36
SMB1YER029C NUP188P52593 1655 aaKnown RBP0.29□□□□□ -2.36
SMB1YER029C PMD1P32634 1753 aa0.29□□□□□ -2.36
SMB1YER029C TY1B-DR4Q07793 1604 aa0.28□□□□□ -2.36
SMB1YER029C MLP2P40457 1679 aa0.28□□□□□ -2.36
SMB1YER029C YAL065CO13511 128 aa0.28□□□□□ -2.36
SMB1YER029C YJR107C-AP0CT86 78 aa0.28□□□□□ -2.36
SMB1YER029C YCR085WP25650 117 aa0.28□□□□□ -2.36
SMB1YER029C TOM6P33448 61 aa0.28□□□□□ -2.36
SMB1YER029C ATX1P38636 73 aa0.28□□□□□ -2.36
SMB1YER029C YNL198CP40166 100 aa0.28□□□□□ -2.36
SMB1YER029C POC4Q12245 148 aaPredicted RBP0.28□□□□□ -2.36
SMB1YER029C YPR145C-AQ2V2P0 78 aa0.28□□□□□ -2.36
SMB1YER029C YMR175W-AQ3E766 64 aa0.28□□□□□ -2.36
SMB1YER029C SDH6Q3E785 79 aa0.28□□□□□ -2.36
SMB1YER029C YMR122W-AQ3E842 84 aa0.28□□□□□ -2.36
SMB1YER029C YIL134C-AQ45U18 67 aa0.28□□□□□ -2.36
SMB1YER029C NOP10Q6Q547 58 aaPredicted RBP0.28□□□□□ -2.36
SMB1YER029C STT4P37297 1900 aa0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms