RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	RPL2B	P0CX46	254 aa	Known RBP	3.11	□□□□□ -1.91
HSP42	YDR171W	HUR1	P45820	110 aa		3.11	□□□□□ -1.91
HSP42	YDR171W	YNL046W	P53956	172 aa		3.11	□□□□□ -1.91
HSP42	YDR171W	YSY6	P38374	65 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	SHU1	P38751	150 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	KEG1	P43614	200 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	YNL190W	P53872	204 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	YBR200W-A	Q3E755	54 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	KTI11	Q3E840	82 aa		3.1	□□□□□ -1.91
HSP42	YDR171W	RPL16A	P26784	199 aa	Known RBP	3.09	□□□□□ -1.91
HSP42	YDR171W	RPL16B	P26785	198 aa	Known RBP	3.09	□□□□□ -1.91
HSP42	YDR171W	IES6	P32617	166 aa		3.09	□□□□□ -1.91
HSP42	YDR171W	SVP26	P38869	228 aa		3.09	□□□□□ -1.91
HSP42	YDR171W	PBP4	Q07362	185 aa	Known RBP	3.09	□□□□□ -1.91
HSP42	YDR171W	IRA2	P19158	3079 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	YCR050C	P25630	102 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	YHL018W	P38744	120 aa	Predicted RBP	3.08	□□□□□ -1.92
HSP42	YDR171W	YHR022C	P38763	256 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	CTR2	P38865	189 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	RRT13	P40042	185 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	CCW12	Q12127	133 aa		3.08	□□□□□ -1.92
HSP42	YDR171W	NRM1	P53718	249 aa		3.07	□□□□□ -1.92
HSP42	YDR171W	RGM1	Q00453	211 aa		3.07	□□□□□ -1.92
HSP42	YDR171W	SED1	Q01589	338 aa		3.07	□□□□□ -1.92
HSP42	YDR171W	YOR020W-A	Q3E824	90 aa		3.07	□□□□□ -1.92
HSP42	YDR171W	YHL037C	P38733	133 aa		3.06	□□□□□ -1.92
HSP42	YDR171W	ERG28	P40030	148 aa		3.06	□□□□□ -1.92
HSP42	YDR171W	YER187W	P40102	141 aa		3.06	□□□□□ -1.92
HSP42	YDR171W	CSF1	Q12150	2958 aa		3.06	□□□□□ -1.92
HSP42	YDR171W	YLR412C-A	Q3E742	68 aa		3.06	□□□□□ -1.92
HSP42	YDR171W	FMP27	Q06179	2628 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	YEL008W	P40001	126 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	ARC15	P40518	154 aa	RIP-Chip data	3.05	□□□□□ -1.92	not detected
HSP42	YDR171W	YGR164W	P53291	111 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	YLR042C	Q07990	161 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	YKL183C-A	Q3E765	70 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	YNL146C-A	Q3E7Z1	64 aa		3.05	□□□□□ -1.92
HSP42	YDR171W	YLR236C	A0A023PZG4	107 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YAR029W	P39549	74 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YNL194C	P40169	301 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	ALG13	P53178	202 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	IRC21	Q04772	201 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YMR175W-A	Q3E766	64 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YLR285C-A	Q3E771	56 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YOL085C	Q99345	113 aa		3.04	□□□□□ -1.92
HSP42	YDR171W	YJR107C-A	P0CT86	78 aa		3.03	□□□□□ -1.92
HSP42	YDR171W	YBR209W	P38311	105 aa		3.03	□□□□□ -1.92
HSP42	YDR171W	YGR025W	P53216	100 aa		3.03	□□□□□ -1.92
HSP42	YDR171W	YCL048W-A	Q2V2Q2	79 aa		3.03	□□□□□ -1.92
HSP42	YDR171W	UBC4	P15731	148 aa		3.02	□□□□□ -1.93
HSP42	YDR171W	BET1	P22804	142 aa		3.02	□□□□□ -1.93
HSP42	YDR171W	KSH1	Q8TGJ3	72 aa		3.02	□□□□□ -1.93
HSP42	YDR171W	YLR156W	P0CE96	114 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	YLR159W	P0CE97	114 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	YLR161W	P0CE98	114 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
HSP42	YDR171W	AIM4	P38305	123 aa	Predicted RBP	3.01	□□□□□ -1.93
HSP42	YDR171W	IGD1	P43598	195 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	YGL088W	P53151	121 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	RSM19	P53733	91 aa	Predicted RBP	3.01	□□□□□ -1.93
HSP42	YDR171W	YDR246W-A	Q3E763	66 aa		3.01	□□□□□ -1.93
HSP42	YDR171W	YER135C	P40082	130 aa		3	□□□□□ -1.93
HSP42	YDR171W	GAT4	P40569	121 aa		3	□□□□□ -1.93
HSP42	YDR171W	ATP18	P81450	59 aa		3	□□□□□ -1.93
HSP42	YDR171W	PMP3	P87284	55 aa		3	□□□□□ -1.93
HSP42	YDR171W	ATP20	Q12233	115 aa		3	□□□□□ -1.93
HSP42	YDR171W	YOR011W-A	Q3E807	68 aa		3	□□□□□ -1.93
HSP42	YDR171W	YFR035C	P43608	114 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YPS5	P53057	165 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YMR295C	Q03559	197 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YPR013C	Q12145	317 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YOR034C-A	Q3E735	80 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	SPO24	Q3E752	67 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YLL006W-A	Q3E814	58 aa		2.99	□□□□□ -1.93
HSP42	YDR171W	YAL065C	O13511	128 aa		2.98	□□□□□ -1.93
HSP42	YDR171W	SPS100	P13130	326 aa		2.98	□□□□□ -1.93
HSP42	YDR171W	YMR244W	Q04018	355 aa		2.98	□□□□□ -1.93
HSP42	YDR171W	SPG4	Q04438	115 aa		2.98	□□□□□ -1.93
HSP42	YDR171W	VAM10	Q08474	114 aa		2.98	□□□□□ -1.93
HSP42	YDR171W	MPC3	P53311	146 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	MRPS8	Q03799	155 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	ICY1	Q04329	127 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	YOR314W	Q12506	109 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	TSC3	Q3E790	80 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	YDR182W-A	Q3E796	67 aa		2.97	□□□□□ -1.93
HSP42	YDR171W	RPL29	P05747	59 aa	Predicted RBP	2.96	□□□□□ -1.94
HSP42	YDR171W	TOS8	P53147	276 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	MMS2	P53152	137 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	YDR115W	Q04598	105 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	YNL277W-A	Q3E7Z0	62 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	YDR034W-B	Q6Q5X2	51 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	YPR117W	Q06116	2489 aa		2.96	□□□□□ -1.94
HSP42	YDR171W	RPL36B	O14455	100 aa	Known RBP	2.95	□□□□□ -1.94
HSP42	YDR171W	RPL36A	P05745	100 aa	Predicted RBP	2.95	□□□□□ -1.94
HSP42	YDR171W	YBR219C	P38317	127 aa		2.95	□□□□□ -1.94
HSP42	YDR171W	TDA2	P40045	126 aa		2.95	□□□□□ -1.94
HSP42	YDR171W	EDC1	P53080	175 aa	Predicted RBP	2.95	□□□□□ -1.94
HSP42	YDR171W	ERI1	P62651	68 aa	Known RBP	2.95	□□□□□ -1.94
HSP42	YDR171W	YDL012C	Q12489	107 aa		2.95	□□□□□ -1.94
HSP42	YDR171W	TDA8	Q6B2U8	126 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms