RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C PPT2Q12036 173 aa4.64□□□□□ -1.67
VPS61YDR136C CWP2P43497 92 aa4.63□□□□□ -1.67
VPS61YDR136C YAR1P46683 200 aa4.63□□□□□ -1.67
VPS61YDR136C COX14P39103 70 aa4.62□□□□□ -1.67
VPS61YDR136C ARC15P40518 154 aaRIP-Chip data4.62□□□□□ -1.67not detected
VPS61YDR136C RGM1Q00453 211 aa4.62□□□□□ -1.67
VPS61YDR136C COX12Q01519 83 aa4.62□□□□□ -1.67
VPS61YDR136C YMR295CQ03559 197 aa4.62□□□□□ -1.67
VPS61YDR136C YDR381C-AQ3E6R5 114 aa4.62□□□□□ -1.67
VPS61YDR136C RPB9P27999 122 aa4.61□□□□□ -1.67
VPS61YDR136C TOA2P32774 122 aa4.61□□□□□ -1.67
VPS61YDR136C MSA2P36157 363 aa4.61□□□□□ -1.67
VPS61YDR136C MRPL24P36525 258 aaPredicted RBP4.61□□□□□ -1.67
VPS61YDR136C YBR219CP38317 127 aa4.61□□□□□ -1.67
VPS61YDR136C RPR2P40571 144 aa4.61□□□□□ -1.67
VPS61YDR136C UBC11P52492 156 aa4.61□□□□□ -1.67
VPS61YDR136C YOR020W-AQ3E824 90 aa4.61□□□□□ -1.67
VPS61YDR136C YPL229WQ99395 206 aa4.61□□□□□ -1.67
VPS61YDR136C MPC2P38857 129 aa4.6□□□□□ -1.67
VPS61YDR136C VAM10Q08474 114 aa4.6□□□□□ -1.67
VPS61YDR136C YBR126W-AQ8TGU7 68 aa4.6□□□□□ -1.67
VPS61YDR136C PRP8P33334 2413 aaKnown RBP4.6□□□□□ -1.67
VPS61YDR136C SVP26P38869 228 aa4.59□□□□□ -1.67
VPS61YDR136C YLL006W-AQ3E814 58 aa4.59□□□□□ -1.67
VPS61YDR136C YMR122W-AQ3E842 84 aa4.59□□□□□ -1.67
VPS61YDR136C PBI2P0CT04 75 aaKnown RBP4.58□□□□□ -1.68
VPS61YDR136C YLR236CA0A023PZG4 107 aa4.57□□□□□ -1.68
VPS61YDR136C YHR139C-AO13536 103 aa4.57□□□□□ -1.68
VPS61YDR136C YOR304C-AO14468 76 aa4.57□□□□□ -1.68
VPS61YDR136C YHR212W-AP0CX91 67 aa4.57□□□□□ -1.68
VPS61YDR136C ERI1P62651 68 aaKnown RBP4.57□□□□□ -1.68
VPS61YDR136C PBA1Q05778 276 aa4.57□□□□□ -1.68
VPS61YDR136C YDR119W-AQ2V2P9 66 aa4.57□□□□□ -1.68
VPS61YDR136C MEC1P38111 2368 aa4.57□□□□□ -1.68
VPS61YDR136C YGR240C-AQ3E786 66 aa4.56□□□□□ -1.68
VPS61YDR136C RPL43AP0CX25 92 aaKnown RBP4.55□□□□□ -1.68
VPS61YDR136C RPL43BP0CX26 92 aa4.55□□□□□ -1.68
VPS61YDR136C YOR034C-AQ3E735 80 aa4.55□□□□□ -1.68
VPS61YDR136C ENV10Q99382 181 aa4.55□□□□□ -1.68
VPS61YDR136C YBR144CP34215 104 aa4.54□□□□□ -1.68
VPS61YDR136C YDR274CP87283 123 aa4.54□□□□□ -1.68
VPS61YDR136C YAL065CO13511 128 aa4.53□□□□□ -1.68
VPS61YDR136C SMP1P38128 452 aa4.53□□□□□ -1.68
VPS61YDR136C HAL1Q01766 294 aa4.53□□□□□ -1.68
VPS61YDR136C YPL080CQ02826 108 aa4.53□□□□□ -1.68
VPS61YDR136C SHH4Q06236 168 aa4.53□□□□□ -1.68
VPS61YDR136C KNH1P50112 268 aa4.52□□□□□ -1.69
VPS61YDR136C COF1Q03048 143 aaKnown RBP4.52□□□□□ -1.69
VPS61YDR136C IRC21Q04772 201 aa4.52□□□□□ -1.69
VPS61YDR136C EMC6Q12431 108 aa4.52□□□□□ -1.69
VPS61YDR136C YIR021W-AQ3E739 70 aa4.52□□□□□ -1.69
VPS61YDR136C YMR175W-AQ3E766 64 aa4.52□□□□□ -1.69
VPS61YDR136C RPL29P05747 59 aaPredicted RBP4.51□□□□□ -1.69
VPS61YDR136C YJR107C-AP0CT86 78 aa4.51□□□□□ -1.69
VPS61YDR136C YHL042WP38729 150 aa4.51□□□□□ -1.69
VPS61YDR136C ERG28P40030 148 aa4.51□□□□□ -1.69
VPS61YDR136C YDL186WP48568 277 aa4.51□□□□□ -1.69
VPS61YDR136C YGR039WP53225 103 aa4.51□□□□□ -1.69
VPS61YDR136C RDS3Q06835 107 aaPredicted RBP4.51□□□□□ -1.69
VPS61YDR136C CRC1Q12289 327 aa4.51□□□□□ -1.69
VPS61YDR136C YBL112CQ3E7Y4 105 aa4.51□□□□□ -1.69
VPS61YDR136C YCR001WP25347 104 aa4.5□□□□□ -1.69
VPS61YDR136C MPC3P53311 146 aa4.5□□□□□ -1.69
VPS61YDR136C ICY1Q04329 127 aa4.5□□□□□ -1.69
VPS61YDR136C YDL241WQ07738 123 aa4.5□□□□□ -1.69
VPS61YDR136C TEL1P38110 2787 aa4.49□□□□□ -1.69
VPS61YDR136C RAD6P06104 172 aa4.49□□□□□ -1.69
VPS61YDR136C ATP18P81450 59 aa4.49□□□□□ -1.69
VPS61YDR136C YPL038W-AQ3E7B4 63 aa4.49□□□□□ -1.69
VPS61YDR136C YPR010C-AA5Z2X5 72 aa4.47□□□□□ -1.69
VPS61YDR136C YSY6P38374 65 aa4.47□□□□□ -1.69
VPS61YDR136C RPC10P40422 70 aa4.47□□□□□ -1.69
VPS61YDR136C GAT4P40569 121 aa4.46□□□□□ -1.7
VPS61YDR136C MVB12P42939 101 aa4.46□□□□□ -1.7
VPS61YDR136C YDR029WQ12111 104 aa4.46□□□□□ -1.7
VPS61YDR136C YGR035W-AQ45U48 73 aa4.46□□□□□ -1.7
VPS61YDR136C YHL018WP38744 120 aaPredicted RBP4.45□□□□□ -1.7
VPS61YDR136C YMR320WQ04897 101 aa4.45□□□□□ -1.7
VPS61YDR136C YFL019CP43576 117 aa4.44□□□□□ -1.7
VPS61YDR136C RSM19P53733 91 aaPredicted RBP4.44□□□□□ -1.7
VPS61YDR136C RPL33AP05744 107 aaKnown RBP4.43□□□□□ -1.7
VPS61YDR136C YBL039W-BP0C268 59 aa4.43□□□□□ -1.7
VPS61YDR136C AQY2P0CD90 149 aa4.43□□□□□ -1.7
VPS61YDR136C TOM6P33448 61 aa4.43□□□□□ -1.7
VPS61YDR136C RPL33BP41056 107 aaKnown RBP4.43□□□□□ -1.7
VPS61YDR136C EDC1P53080 175 aaPredicted RBP4.43□□□□□ -1.7
VPS61YDR136C SGF11Q03067 99 aa4.43□□□□□ -1.7
VPS61YDR136C YNL162W-AQ3E7A8 72 aa4.43□□□□□ -1.7
VPS61YDR136C ECM12O13529 151 aa4.42□□□□□ -1.7
VPS61YDR136C RPL26AP05743 127 aaKnown RBP4.42□□□□□ -1.7
VPS61YDR136C YFR009W-AP0C5M9 85 aa4.42□□□□□ -1.7
VPS61YDR136C YBL081WP38180 368 aaKnown RBP4.42□□□□□ -1.7
VPS61YDR136C YAL064WP39711 94 aa4.42□□□□□ -1.7
VPS61YDR136C RPL26BP53221 127 aaKnown RBP4.42□□□□□ -1.7
VPS61YDR136C YLR285C-AQ3E771 56 aa4.42□□□□□ -1.7
VPS61YDR136C TSC3Q3E790 80 aa4.42□□□□□ -1.7
VPS61YDR136C UBC4P15731 148 aa4.41□□□□□ -1.7
VPS61YDR136C SMD1Q02260 146 aaPredicted RBP4.41□□□□□ -1.7
VPS61YDR136C YLR156WP0CE96 114 aa4.4□□□□□ -1.71
VPS61YDR136C YLR159WP0CE97 114 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms