RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C MIX14Q04341 121 aa0.73□□□□□ -2.29
UFD2YDL190C YCR075W-AQ3E830 75 aa0.73□□□□□ -2.29
UFD2YDL190C COA6Q3E846 104 aa0.73□□□□□ -2.29
UFD2YDL190C KSH1Q8TGJ3 72 aa0.73□□□□□ -2.29
UFD2YDL190C MIC10Q96VH5 97 aa0.73□□□□□ -2.29
UFD2YDL190C RPL33AP05744 107 aaKnown RBP0.73□□□□□ -2.29
UFD2YDL190C PFY1P07274 126 aa0.73□□□□□ -2.29
UFD2YDL190C YGL014C-AP0C5N1 53 aa0.73□□□□□ -2.29
UFD2YDL190C PAU12P53343 120 aa0.73□□□□□ -2.29
UFD2YDL190C PCC1Q3E833 88 aa0.73□□□□□ -2.29
UFD2YDL190C YBR027CP38220 110 aa0.72□□□□□ -2.29
UFD2YDL190C YIR020CP40575 100 aa0.72□□□□□ -2.29
UFD2YDL190C LST8P41318 303 aa0.72□□□□□ -2.29
UFD2YDL190C RPL22BP56628 122 aaKnown RBP0.72□□□□□ -2.29
UFD2YDL190C YLR194CQ05777 254 aa0.72□□□□□ -2.29
UFD2YDL190C HPA2Q06592 156 aa0.72□□□□□ -2.29
UFD2YDL190C SLH1P53327 1967 aaKnown RBP0.72□□□□□ -2.29
UFD2YDL190C ATG8P38182 117 aaRIP-Chip data0.72□□□□□ -2.29not detected
UFD2YDL190C SNN1P48232 102 aa0.72□□□□□ -2.29
UFD2YDL190C YPR203WQ08994 102 aa0.72□□□□□ -2.29
UFD2YDL190C PAU2P32612 120 aa0.71□□□□□ -2.3
UFD2YDL190C YMR122CQ03879 124 aa0.71□□□□□ -2.3
UFD2YDL190C PAU19P0CE85 124 aa0.71□□□□□ -2.3
UFD2YDL190C PAU3P25610 124 aa0.71□□□□□ -2.3
UFD2YDL190C PAU24P38155 120 aa0.71□□□□□ -2.3
UFD2YDL190C COX23P38824 151 aa0.71□□□□□ -2.3
UFD2YDL190C POR2P40478 281 aa0.71□□□□□ -2.3
UFD2YDL190C SEN15Q04675 128 aa0.71□□□□□ -2.3
UFD2YDL190C FIT3Q08907 204 aa0.71□□□□□ -2.3
UFD2YDL190C PRM3Q08931 133 aa0.71□□□□□ -2.3
UFD2YDL190C ROX3P25046 220 aa0.71□□□□□ -2.3
UFD2YDL190C SNU13P39990 126 aaKnown RBP0.71□□□□□ -2.3
UFD2YDL190C EMC5P40540 141 aa0.71□□□□□ -2.3
UFD2YDL190C MSL1P40567 111 aaPredicted RBP0.71□□□□□ -2.3
UFD2YDL190C NHP10Q03435 203 aa0.71□□□□□ -2.3
UFD2YDL190C YGL194C-AQ2V2P6 80 aa0.71□□□□□ -2.3
UFD2YDL190C AIM4P38305 123 aaPredicted RBP0.7□□□□□ -2.3
UFD2YDL190C YHR138CP38841 114 aaPredicted RBP0.7□□□□□ -2.3
UFD2YDL190C RSM19P53733 91 aaPredicted RBP0.7□□□□□ -2.3
UFD2YDL190C COA4Q05809 96 aa0.7□□□□□ -2.3
UFD2YDL190C YDR029WQ12111 104 aa0.7□□□□□ -2.3
UFD2YDL190C YHL005CP38752 130 aa0.7□□□□□ -2.3
UFD2YDL190C YMR082CQ04276 118 aa0.7□□□□□ -2.3
UFD2YDL190C IRC21Q04772 201 aa0.7□□□□□ -2.3
UFD2YDL190C YLR363W-AQ3E747 85 aa0.7□□□□□ -2.3
UFD2YDL190C RPL22AP05749 121 aaKnown RBP0.69□□□□□ -2.3
UFD2YDL190C PAU16P35994 123 aa0.69□□□□□ -2.3
UFD2YDL190C YIL163CP40448 117 aa0.69□□□□□ -2.3
UFD2YDL190C PAU15P40585 124 aa0.69□□□□□ -2.3
UFD2YDL190C SCP1Q08873 200 aa0.69□□□□□ -2.3
UFD2YDL190C YSF3P0C074 85 aaPredicted RBP0.69□□□□□ -2.3
UFD2YDL190C YCL048W-AQ2V2Q2 79 aa0.69□□□□□ -2.3
UFD2YDL190C BLM10P43583 2143 aa0.69□□□□□ -2.3
UFD2YDL190C ECM12O13529 151 aa0.68□□□□□ -2.3
UFD2YDL190C HMRA1P0CY11 126 aa0.68□□□□□ -2.3
UFD2YDL190C SRB6P32570 121 aa0.68□□□□□ -2.3
UFD2YDL190C CYB5P40312 120 aa0.68□□□□□ -2.3
UFD2YDL190C YJL009WP47078 108 aa0.68□□□□□ -2.3
UFD2YDL190C RRT15Q3E811 62 aa0.68□□□□□ -2.3
UFD2YDL190C YKL068W-AQ3E826 78 aa0.68□□□□□ -2.3
UFD2YDL190C URA2P07259 2214 aaKnown RBP0.68□□□□□ -2.3
UFD2YDL190C ICS3P47034 131 aa0.68□□□□□ -2.3
UFD2YDL190C YNL122CP53921 115 aaPredicted RBP0.68□□□□□ -2.3
UFD2YDL190C YGL041C-BQ3E750 60 aa0.68□□□□□ -2.3
UFD2YDL190C YLR285C-AQ3E771 56 aa0.68□□□□□ -2.3
UFD2YDL190C SUS1Q6WNK7 96 aa0.68□□□□□ -2.3
UFD2YDL190C HMRA2P0CY13 119 aa0.67□□□□□ -2.3
UFD2YDL190C YAR064WP39563 99 aa0.67□□□□□ -2.3
UFD2YDL190C VPS55P47111 140 aa0.67□□□□□ -2.3
UFD2YDL190C LSM6Q06406 86 aaKnown RBP0.67□□□□□ -2.3
UFD2YDL190C CCW12Q12127 133 aa0.67□□□□□ -2.3
UFD2YDL190C HUA1P40325 198 aa0.67□□□□□ -2.3
UFD2YDL190C YDR042CQ03205 200 aa0.67□□□□□ -2.3
UFD2YDL190C YMR007WQ03675 126 aa0.67□□□□□ -2.3
UFD2YDL190C YOR072WQ08486 104 aa0.67□□□□□ -2.3
UFD2YDL190C ENV10Q99382 181 aa0.67□□□□□ -2.3
UFD2YDL190C RSM18P40033 138 aa0.67□□□□□ -2.3
UFD2YDL190C PAU5P43575 122 aa0.67□□□□□ -2.3
UFD2YDL190C YOL118CQ08259 102 aa0.67□□□□□ -2.3
UFD2YDL190C YGR240C-AQ3E786 66 aa0.67□□□□□ -2.3
UFD2YDL190C YBR013CP38215 129 aa0.66□□□□□ -2.3
UFD2YDL190C GCV3P39726 170 aaPredicted RBP0.66□□□□□ -2.3
UFD2YDL190C IMP2P46972 177 aa0.66□□□□□ -2.3
UFD2YDL190C YCR095W-AQ3E787 52 aa0.66□□□□□ -2.3
UFD2YDL190C RPS22AP0C0W1 130 aaKnown RBP0.66□□□□□ -2.3
UFD2YDL190C LCL2Q08045 131 aa0.66□□□□□ -2.3
UFD2YDL190C YCR001WP25347 104 aa0.65□□□□□ -2.31
UFD2YDL190C YIL102CP40488 101 aa0.65□□□□□ -2.31
UFD2YDL190C MIC27P50945 234 aa0.65□□□□□ -2.31
UFD2YDL190C ICY1Q04329 127 aa0.65□□□□□ -2.31
UFD2YDL190C YMR175W-AQ3E766 64 aa0.65□□□□□ -2.31
UFD2YDL190C MRPL31P14063 131 aaPredicted RBP0.65□□□□□ -2.31
UFD2YDL190C MRPS12P53732 153 aa0.65□□□□□ -2.31
UFD2YDL190C YDR210WQ03482 75 aa0.65□□□□□ -2.31
UFD2YDL190C RPS22BQ3E7Y3 130 aaKnown RBP0.65□□□□□ -2.31
UFD2YDL190C YOL013W-AP0C272 63 aaPredicted RBP0.64□□□□□ -2.31
UFD2YDL190C AUA1P32450 94 aa0.64□□□□□ -2.31
UFD2YDL190C RPA12P32529 125 aaKnown RBP0.64□□□□□ -2.31
UFD2YDL190C SNA2P56508 79 aa0.64□□□□□ -2.31
UFD2YDL190C MGR2Q02889 113 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms