RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C YIL102C-AQ2V2P5 75 aa3.76□□□□□ -1.81
ATG20YDL113C YGR240C-AQ3E786 66 aa3.76□□□□□ -1.81
ATG20YDL113C YBR121C-AP0C5L4 52 aa3.76□□□□□ -1.81
ATG20YDL113C PEX17P40155 199 aa3.76□□□□□ -1.81
ATG20YDL113C VAM10Q08474 114 aa3.76□□□□□ -1.81
ATG20YDL113C YLR296WQ05898 108 aa3.75□□□□□ -1.81
ATG20YDL113C YMR122W-AQ3E842 84 aa3.75□□□□□ -1.81
ATG20YDL113C CPR1P14832 162 aaKnown RBP3.74□□□□□ -1.81
ATG20YDL113C HYP2P23301 157 aaKnown RBP3.74□□□□□ -1.81
ATG20YDL113C HAL1Q01766 294 aa3.74□□□□□ -1.81
ATG20YDL113C YRA2P36036 203 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
ATG20YDL113C SPT4P32914 102 aaPredicted RBP3.72□□□□□ -1.81
ATG20YDL113C YKL023C-AQ2V2P3 75 aa3.72□□□□□ -1.81
ATG20YDL113C ADH1P00330 348 aaKnown RBP3.72□□□□□ -1.81
ATG20YDL113C ANB1P19211 157 aa3.72□□□□□ -1.81
ATG20YDL113C ARO2P28777 376 aaKnown RBP3.72□□□□□ -1.81
ATG20YDL113C AUA1P32450 94 aa3.72□□□□□ -1.81
ATG20YDL113C LSM6Q06406 86 aaKnown RBP3.72□□□□□ -1.81
ATG20YDL113C QCR8P08525 94 aa3.71□□□□□ -1.82
ATG20YDL113C NHP2P32495 156 aaPredicted RBP3.71□□□□□ -1.82
ATG20YDL113C COX14P39103 70 aa3.71□□□□□ -1.82
ATG20YDL113C YIA6P40556 373 aa3.71□□□□□ -1.82
ATG20YDL113C ERI1P62651 68 aaKnown RBP3.71□□□□□ -1.82
ATG20YDL113C YMR320WQ04897 101 aa3.71□□□□□ -1.82
ATG20YDL113C SVP26P38869 228 aa3.7□□□□□ -1.82
ATG20YDL113C ENV10Q99382 181 aa3.7□□□□□ -1.82
ATG20YDL113C YBL081WP38180 368 aaKnown RBP3.69□□□□□ -1.82
ATG20YDL113C YAR029WP39549 74 aa3.69□□□□□ -1.82
ATG20YDL113C YAL064WP39711 94 aa3.69□□□□□ -1.82
ATG20YDL113C CWP2P43497 92 aa3.69□□□□□ -1.82
ATG20YDL113C PPT2Q12036 173 aa3.69□□□□□ -1.82
ATG20YDL113C RRT15Q3E811 62 aa3.69□□□□□ -1.82
ATG20YDL113C RPL33AP05744 107 aaKnown RBP3.68□□□□□ -1.82
ATG20YDL113C POP7P38291 140 aa3.68□□□□□ -1.82
ATG20YDL113C RPR2P40571 144 aa3.68□□□□□ -1.82
ATG20YDL113C RPL33BP41056 107 aaKnown RBP3.68□□□□□ -1.82
ATG20YDL113C PBA1Q05778 276 aa3.68□□□□□ -1.82
ATG20YDL113C YOR034C-AQ3E735 80 aa3.68□□□□□ -1.82
ATG20YDL113C YAL065CO13511 128 aa3.68□□□□□ -1.82
ATG20YDL113C YLL006W-AQ3E814 58 aa3.68□□□□□ -1.82
ATG20YDL113C YHR130CP38834 111 aa3.67□□□□□ -1.82
ATG20YDL113C DSE2P38844 325 aa3.67□□□□□ -1.82
ATG20YDL113C YLL066W-BQ8TGJ7 56 aa3.67□□□□□ -1.82
ATG20YDL113C SMD1Q02260 146 aaPredicted RBP3.66□□□□□ -1.82
ATG20YDL113C YDR115WQ04598 105 aa3.66□□□□□ -1.82
ATG20YDL113C PEX22P39718 180 aa3.66□□□□□ -1.82
ATG20YDL113C SPC1P46965 94 aa3.66□□□□□ -1.82
ATG20YDL113C RUB1Q03919 77 aa3.66□□□□□ -1.82
ATG20YDL113C HPA2Q06592 156 aa3.66□□□□□ -1.82
ATG20YDL113C RPC10P40422 70 aa3.65□□□□□ -1.83
ATG20YDL113C RGM1Q00453 211 aa3.65□□□□□ -1.83
ATG20YDL113C ABF2Q02486 183 aa3.65□□□□□ -1.83
ATG20YDL113C YMR175W-AQ3E766 64 aa3.65□□□□□ -1.83
ATG20YDL113C YPL229WQ99395 206 aa3.65□□□□□ -1.83
ATG20YDL113C YPR010C-AA5Z2X5 72 aa3.64□□□□□ -1.83
ATG20YDL113C HUR1P45820 110 aa3.64□□□□□ -1.83
ATG20YDL113C RTC6O14464 93 aa3.63□□□□□ -1.83
ATG20YDL113C YJR085CP47131 105 aaKnown RBP3.63□□□□□ -1.83
ATG20YDL113C MRPL24P36525 258 aaPredicted RBP3.62□□□□□ -1.83
ATG20YDL113C YPL257WQ08974 193 aa3.62□□□□□ -1.83
ATG20YDL113C SLO1Q3E784 85 aa3.62□□□□□ -1.83
ATG20YDL113C YAR023CD6VPM8 179 aa3.62□□□□□ -1.83
ATG20YDL113C AQY2P0CD90 149 aa3.62□□□□□ -1.83
ATG20YDL113C COX10P21592 462 aa3.62□□□□□ -1.83
ATG20YDL113C RPA12P32529 125 aaKnown RBP3.62□□□□□ -1.83
ATG20YDL113C MVB12P42939 101 aa3.62□□□□□ -1.83
ATG20YDL113C OST2P46964 130 aa3.62□□□□□ -1.83
ATG20YDL113C KNH1P50112 268 aa3.62□□□□□ -1.83
ATG20YDL113C IRC21Q04772 201 aa3.61□□□□□ -1.83
ATG20YDL113C YOR020W-AQ3E824 90 aa3.61□□□□□ -1.83
ATG20YDL113C INO4P13902 151 aa3.6□□□□□ -1.83
ATG20YDL113C ATX1P38636 73 aa3.6□□□□□ -1.83
ATG20YDL113C AIM19P40502 157 aa3.6□□□□□ -1.83
ATG20YDL113C SNA2P56508 79 aa3.6□□□□□ -1.83
ATG20YDL113C YDL241WQ07738 123 aa3.6□□□□□ -1.83
ATG20YDL113C YPR195CQ06594 109 aa3.6□□□□□ -1.83
ATG20YDL113C MPC3P53311 146 aa3.58□□□□□ -1.84
ATG20YDL113C SMP1P38128 452 aa3.58□□□□□ -1.84
ATG20YDL113C YFL019CP43576 117 aa3.58□□□□□ -1.84
ATG20YDL113C IGD1P43598 195 aa3.58□□□□□ -1.84
ATG20YDL113C MMS2P53152 137 aa3.58□□□□□ -1.84
ATG20YDL113C YBL039W-BP0C268 59 aa3.57□□□□□ -1.84
ATG20YDL113C YCR043CP25361 127 aa3.57□□□□□ -1.84
ATG20YDL113C RPL29P05747 59 aaPredicted RBP3.56□□□□□ -1.84
ATG20YDL113C ICY1Q04329 127 aa3.56□□□□□ -1.84
ATG20YDL113C YNL162W-AQ3E7A8 72 aa3.56□□□□□ -1.84
ATG20YDL113C YLR236CA0A023PZG4 107 aa3.56□□□□□ -1.84
ATG20YDL113C PBI2P0CT04 75 aaKnown RBP3.56□□□□□ -1.84
ATG20YDL113C YFL067WP43537 175 aa3.56□□□□□ -1.84
ATG20YDL113C ISD11Q6Q560 94 aa3.56□□□□□ -1.84
ATG20YDL113C Q0032Q9ZZX7 96 aa3.56□□□□□ -1.84
ATG20YDL113C HHF1P02309 103 aaKnown RBP3.55□□□□□ -1.84
ATG20YDL113C MSA2P36157 363 aa3.54□□□□□ -1.84
ATG20YDL113C YER078W-AQ3E7A2 54 aa3.54□□□□□ -1.84
ATG20YDL113C YJR107C-AP0CT86 78 aa3.54□□□□□ -1.84
ATG20YDL113C UBC4P15731 148 aa3.54□□□□□ -1.84
ATG20YDL113C YDR029WQ12111 104 aa3.54□□□□□ -1.84
ATG20YDL113C YGL034CP53186 121 aa3.52□□□□□ -1.85
ATG20YDL113C RPL26AP05743 127 aaKnown RBP3.52□□□□□ -1.85
ATG20YDL113C YDR034C-AP0C289 58 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms