RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	PAU12	P53343	120 aa		0.75	□□□□□ -2.29
APM3	YBR288C	MGR2	Q02889	113 aa		0.75	□□□□□ -2.29
APM3	YBR288C	HAP3	P13434	144 aa		0.74	□□□□□ -2.29
APM3	YBR288C	YIL102C	P40488	101 aa		0.74	□□□□□ -2.29
APM3	YBR288C	AIM11	P87275	137 aa		0.74	□□□□□ -2.29
APM3	YBR288C	YIL014C-A	Q02598	104 aa		0.74	□□□□□ -2.29
APM3	YBR288C	GPI19	Q04082	140 aa		0.74	□□□□□ -2.29
APM3	YBR288C	SPC24	Q04477	213 aa		0.74	□□□□□ -2.29
APM3	YBR288C	YOL131W	Q08270	108 aa		0.74	□□□□□ -2.29
APM3	YBR288C	ADK1	P07170	222 aa	Known RBP	0.73	□□□□□ -2.29
APM3	YBR288C	PFY1	P07274	126 aa		0.73	□□□□□ -2.29
APM3	YBR288C	SNF11	P38956	169 aa		0.73	□□□□□ -2.29
APM3	YBR288C	HHY1	P39982	102 aa		0.73	□□□□□ -2.29
APM3	YBR288C	SGF11	Q03067	99 aa		0.73	□□□□□ -2.29
APM3	YBR288C	YLR194C	Q05777	254 aa		0.73	□□□□□ -2.29
APM3	YBR288C	YKL018C-A	Q3E7A7	99 aa		0.73	□□□□□ -2.29
APM3	YBR288C	EMP24	P32803	203 aa	Known RBP	0.73	□□□□□ -2.29
APM3	YBR288C	LHP1	P33399	275 aa	Known RBP	0.73	□□□□□ -2.29
APM3	YBR288C	RGI1	P40043	161 aa	Predicted RBP	0.73	□□□□□ -2.29
APM3	YBR288C	YER137C	P40083	148 aa	Known RBP	0.73	□□□□□ -2.29
APM3	YBR288C	YLR042C	Q07990	161 aa		0.73	□□□□□ -2.29
APM3	YBR288C	GSP1	P32835	219 aa	Known RBP	0.72	□□□□□ -2.29
APM3	YBR288C	YBR013C	P38215	129 aa		0.72	□□□□□ -2.29
APM3	YBR288C	YHR130C	P38834	111 aa		0.72	□□□□□ -2.29
APM3	YBR288C	RPB11	P38902	120 aa		0.72	□□□□□ -2.29
APM3	YBR288C	YAR029W	P39549	74 aa		0.72	□□□□□ -2.29
APM3	YBR288C	IRC21	Q04772	201 aa		0.72	□□□□□ -2.29
APM3	YBR288C	YIR021W-A	Q3E739	70 aa		0.72	□□□□□ -2.29
APM3	YBR288C	RPL36B	O14455	100 aa	Known RBP	0.71	□□□□□ -2.3
APM3	YBR288C	RPL36A	P05745	100 aa	Predicted RBP	0.71	□□□□□ -2.3
APM3	YBR288C	RPS22A	P0C0W1	130 aa	Known RBP	0.71	□□□□□ -2.3
APM3	YBR288C	YER039C-A	P0CD97	72 aa		0.71	□□□□□ -2.3
APM3	YBR288C	YIL163C	P40448	117 aa		0.71	□□□□□ -2.3
APM3	YBR288C	YJL009W	P47078	108 aa		0.71	□□□□□ -2.3
APM3	YBR288C	MIC27	P50945	234 aa		0.71	□□□□□ -2.3
APM3	YBR288C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.71	□□□□□ -2.3
APM3	YBR288C	PAM16	P42949	149 aa		0.7	□□□□□ -2.3
APM3	YBR288C	APS2	Q00381	147 aa		0.7	□□□□□ -2.3
APM3	YBR288C	YOR289W	Q12012	251 aa	Predicted RBP	0.7	□□□□□ -2.3
APM3	YBR288C	YCR101C	P25607	182 aa		0.69	□□□□□ -2.3
APM3	YBR288C	PAU2	P32612	120 aa		0.69	□□□□□ -2.3
APM3	YBR288C	PAU24	P38155	120 aa		0.69	□□□□□ -2.3
APM3	YBR288C	COX23	P38824	151 aa		0.69	□□□□□ -2.3
APM3	YBR288C	SMX2	P40204	77 aa	Known RBP	0.69	□□□□□ -2.3
APM3	YBR288C	SPC1	P46965	94 aa		0.69	□□□□□ -2.3
APM3	YBR288C	LCL1	Q02786	101 aa		0.69	□□□□□ -2.3
APM3	YBR288C	YOR072W	Q08486	104 aa		0.69	□□□□□ -2.3
APM3	YBR288C	YPL261C	Q08976	102 aa		0.69	□□□□□ -2.3
APM3	YBR288C	YDR010C	Q12426	110 aa		0.69	□□□□□ -2.3
APM3	YBR288C	OST5	Q92316	86 aa		0.69	□□□□□ -2.3
APM3	YBR288C	MRPL38	P35996	138 aa	Predicted RBP	0.68	□□□□□ -2.3
APM3	YBR288C	YER187W	P40102	141 aa		0.68	□□□□□ -2.3
APM3	YBR288C	POR2	P40478	281 aa		0.68	□□□□□ -2.3
APM3	YBR288C	FCF2	Q12035	217 aa	Predicted RBP	0.68	□□□□□ -2.3
APM3	YBR288C	YOR304C-A	O14468	76 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YDR034C-A	P0C289	58 aa		0.67	□□□□□ -2.3
APM3	YBR288C	HPA2	Q06592	156 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YLR285C-A	Q3E771	56 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YCR075W-A	Q3E830	75 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YOS1	Q3E834	85 aa		0.67	□□□□□ -2.3
APM3	YBR288C	KTI11	Q3E840	82 aa		0.67	□□□□□ -2.3
APM3	YBR288C	HUG1	Q6Q5K6	68 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YHR213W-B	Q8TGK1	99 aa		0.67	□□□□□ -2.3
APM3	YBR288C	RPS11A	P0CX47	156 aa	Known RBP	0.67	□□□□□ -2.3
APM3	YBR288C	RPS11B	P0CX48	156 aa	Known RBP	0.67	□□□□□ -2.3
APM3	YBR288C	TDA2	P40045	126 aa		0.67	□□□□□ -2.3
APM3	YBR288C	TOM7	P53507	60 aa		0.67	□□□□□ -2.3
APM3	YBR288C	MRPS12	P53732	153 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YLR307C-A	Q3E825	87 aa		0.67	□□□□□ -2.3
APM3	YBR288C	PCC1	Q3E833	88 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YLL066W-B	Q8TGJ7	56 aa		0.67	□□□□□ -2.3
APM3	YBR288C	YBR032W	P38223	100 aa		0.66	□□□□□ -2.3
APM3	YBR288C	MVB12	P42939	101 aa		0.66	□□□□□ -2.3
APM3	YBR288C	GNA1	P43577	159 aa	Predicted RBP	0.66	□□□□□ -2.3
APM3	YBR288C	ARL3	Q02804	198 aa		0.66	□□□□□ -2.3
APM3	YBR288C	RUB1	Q03919	77 aa		0.66	□□□□□ -2.3
APM3	YBR288C	YGR240C-A	Q3E786	66 aa		0.66	□□□□□ -2.3
APM3	YBR288C	YMR141C	P40211	102 aa		0.65	□□□□□ -2.31
APM3	YBR288C	YOR192C-C	Q3E736	78 aa		0.65	□□□□□ -2.31
APM3	YBR288C	YLR365W	Q7LIF2	110 aa		0.65	□□□□□ -2.31
APM3	YBR288C	YHR138C	P38841	114 aa	Predicted RBP	0.64	□□□□□ -2.31
APM3	YBR288C	YEA6	P39953	335 aa		0.64	□□□□□ -2.31
APM3	YBR288C	RPS29A	P41057	56 aa	Known RBP	0.64	□□□□□ -2.31
APM3	YBR288C	YOR011W-A	Q3E807	68 aa		0.64	□□□□□ -2.31
APM3	YBR288C	YPR010C-A	A5Z2X5	72 aa		0.63	□□□□□ -2.31
APM3	YBR288C	COX9	P07255	59 aa		0.63	□□□□□ -2.31
APM3	YBR288C	MRPL31	P14063	131 aa	Predicted RBP	0.63	□□□□□ -2.31
APM3	YBR288C	BUD23	P25627	275 aa	Predicted RBP	0.63	□□□□□ -2.31
APM3	YBR288C	CYB5	P40312	120 aa		0.63	□□□□□ -2.31
APM3	YBR288C	EMC5	P40540	141 aa		0.63	□□□□□ -2.31
APM3	YBR288C	SNN1	P48232	102 aa		0.63	□□□□□ -2.31
APM3	YBR288C	YOL118C	Q08259	102 aa		0.63	□□□□□ -2.31
APM3	YBR288C	YOR034C-A	Q3E735	80 aa		0.63	□□□□□ -2.31
APM3	YBR288C	COA6	Q3E846	104 aa		0.63	□□□□□ -2.31
APM3	YBR288C	ENV10	Q99382	181 aa		0.63	□□□□□ -2.31
APM3	YBR288C	YLR255C	O13574	117 aa		0.62	□□□□□ -2.31
APM3	YBR288C	PAU19	P0CE85	124 aa		0.62	□□□□□ -2.31
APM3	YBR288C	HMRA2	P0CY13	119 aa		0.62	□□□□□ -2.31
APM3	YBR288C	PAU3	P25610	124 aa		0.62	□□□□□ -2.31
APM3	YBR288C	YBL071C	P38185	102 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms