RNA–Protein interactions for RNA: YBR189W

RPS9B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS9B, Length 588 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS9B	YBR189W	MRPS12	P53732	153 aa		2.7	□□□□□ -1.98
RPS9B	YBR189W	AIM34	Q03673	198 aa		2.7	□□□□□ -1.98
RPS9B	YBR189W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.7	□□□□□ -1.98
RPS9B	YBR189W	YOR011W-A	Q3E807	68 aa		2.7	□□□□□ -1.98
RPS9B	YBR189W	YER039C-A	P0CD97	72 aa		2.69	□□□□□ -1.98
RPS9B	YBR189W	FIP1	P45976	327 aa		2.69	□□□□□ -1.98
RPS9B	YBR189W	YGL088W	P53151	121 aa		2.69	□□□□□ -1.98
RPS9B	YBR189W	HPA2	Q06592	156 aa		2.69	□□□□□ -1.98
RPS9B	YBR189W	TAR1	Q8TGM6	124 aa		2.69	□□□□□ -1.98
RPS9B	YBR189W	ERG28	P40030	148 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	CWP2	P43497	92 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	DCV1	P43595	202 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	TOS8	P53147	276 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	YGL034C	P53186	121 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	YGR039W	P53225	103 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	AIM11	P87275	137 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	ABF2	Q02486	183 aa		2.68	□□□□□ -1.98
RPS9B	YBR189W	YOR097C	Q12274	175 aa	Predicted RBP	2.68	□□□□□ -1.98
RPS9B	YBR189W	PRP8	P33334	2413 aa	Known RBP	2.67	□□□□□ -1.98
RPS9B	YBR189W	ECM12	O13529	151 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	UBC5	P15732	148 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	ATP15	P21306	62 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	RPA12	P32529	125 aa	Known RBP	2.67	□□□□□ -1.98
RPS9B	YBR189W	YER181C	P40097	107 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	SBH1	P52870	82 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	SPG4	Q04438	115 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	HOR7	Q05827	59 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	YOR008C-A	Q3E7B9	74 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	YFL041W-A	Q3E817	63 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	ENV10	Q99382	181 aa		2.67	□□□□□ -1.98
RPS9B	YBR189W	YCR085W	P25650	117 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	YNL190W	P53872	204 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	MRPS8	Q03799	155 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	YLR042C	Q07990	161 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	YOR268C	Q08734	132 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	YDR029W	Q12111	104 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	IGO2	Q9P305	131 aa		2.66	□□□□□ -1.98
RPS9B	YBR189W	Q0255	P03881	472 aa		2.65	□□□□□ -1.99
RPS9B	YBR189W	YNL217W	P40152	326 aa		2.65	□□□□□ -1.99
RPS9B	YBR189W	YLR194C	Q05777	254 aa		2.65	□□□□□ -1.99
RPS9B	YBR189W	KTI11	Q3E840	82 aa		2.65	□□□□□ -1.99
RPS9B	YBR189W	YPL229W	Q99395	206 aa		2.65	□□□□□ -1.99
RPS9B	YBR189W	RPL28	P02406	149 aa	Known RBP	2.64	□□□□□ -1.99
RPS9B	YBR189W	YEL008W	P40001	126 aa		2.64	□□□□□ -1.99
RPS9B	YBR189W	COF1	Q03048	143 aa	Known RBP	2.64	□□□□□ -1.99
RPS9B	YBR189W	LSM6	Q06406	86 aa	Known RBP	2.64	□□□□□ -1.99
RPS9B	YBR189W	YDR119W-A	Q2V2P9	66 aa		2.64	□□□□□ -1.99
RPS9B	YBR189W	MEC1	P38111	2368 aa		2.64	□□□□□ -1.99
RPS9B	YBR189W	CCW14	O13547	238 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	TOM6	P33448	61 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	YHL042W	P38729	150 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	KNH1	P50112	268 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	COX12	Q01519	83 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	YBL008W-A	Q3E821	79 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	TEL1	P38110	2787 aa		2.63	□□□□□ -1.99
RPS9B	YBR189W	RPL43A	P0CX25	92 aa	Known RBP	2.62	□□□□□ -1.99
RPS9B	YBR189W	RPL43B	P0CX26	92 aa		2.62	□□□□□ -1.99
RPS9B	YBR189W	NRG2	P38082	220 aa		2.62	□□□□□ -1.99
RPS9B	YBR189W	YBR219C	P38317	127 aa		2.62	□□□□□ -1.99
RPS9B	YBR189W	SKI6	P46948	246 aa	Predicted RBP	2.62	□□□□□ -1.99
RPS9B	YBR189W	ALG13	P53178	202 aa		2.62	□□□□□ -1.99
RPS9B	YBR189W	YLR412C-A	Q3E742	68 aa		2.62	□□□□□ -1.99
RPS9B	YBR189W	YHR212W-A	P0CX91	67 aa		2.61	□□□□□ -1.99
RPS9B	YBR189W	SHU1	P38751	150 aa		2.61	□□□□□ -1.99
RPS9B	YBR189W	PEX17	P40155	199 aa		2.61	□□□□□ -1.99
RPS9B	YBR189W	YHR139C-A	O13536	103 aa		2.6	□□□□□ -1.99
RPS9B	YBR189W	RPL2A	P0CX45	254 aa	Known RBP	2.6	□□□□□ -1.99
RPS9B	YBR189W	RPL2B	P0CX46	254 aa	Known RBP	2.6	□□□□□ -1.99
RPS9B	YBR189W	RPS11A	P0CX47	156 aa	Known RBP	2.6	□□□□□ -1.99
RPS9B	YBR189W	RPS11B	P0CX48	156 aa	Known RBP	2.6	□□□□□ -1.99
RPS9B	YBR189W	YCR050C	P25630	102 aa		2.6	□□□□□ -1.99
RPS9B	YBR189W	YBR209W	P38311	105 aa		2.6	□□□□□ -1.99
RPS9B	YBR189W	YMR295C	Q03559	197 aa		2.6	□□□□□ -1.99
RPS9B	YBR189W	YPL038W-A	Q3E7B4	63 aa		2.6	□□□□□ -1.99
RPS9B	YBR189W	YKL183C-A	Q3E765	70 aa		2.59	□□□□□ -1.99
RPS9B	YBR189W	QCR8	P08525	94 aa		2.58	□□□□□ -2
RPS9B	YBR189W	PBI2	P0CT04	75 aa	Known RBP	2.58	□□□□□ -2
RPS9B	YBR189W	YHL018W	P38744	120 aa	Predicted RBP	2.58	□□□□□ -2
RPS9B	YBR189W	DSE2	P38844	325 aa		2.58	□□□□□ -2
RPS9B	YBR189W	MPC2	P38857	129 aa		2.58	□□□□□ -2
RPS9B	YBR189W	SVP26	P38869	228 aa		2.58	□□□□□ -2
RPS9B	YBR189W	YGR164W	P53291	111 aa		2.58	□□□□□ -2
RPS9B	YBR189W	YMR320W	Q04897	101 aa		2.58	□□□□□ -2
RPS9B	YBR189W	SHH4	Q06236	168 aa		2.58	□□□□□ -2
RPS9B	YBR189W	RPL26A	P05743	127 aa	Known RBP	2.57	□□□□□ -2
RPS9B	YBR189W	RPL26B	P53221	127 aa	Known RBP	2.57	□□□□□ -2
RPS9B	YBR189W	PMP3	P87284	55 aa		2.57	□□□□□ -2
RPS9B	YBR189W	RGM1	Q00453	211 aa		2.57	□□□□□ -2
RPS9B	YBR189W	YAL065C	O13511	128 aa		2.56	□□□□□ -2
RPS9B	YBR189W	BET1	P22804	142 aa		2.56	□□□□□ -2
RPS9B	YBR189W	MSA2	P36157	363 aa		2.56	□□□□□ -2
RPS9B	YBR189W	ARC15	P40518	154 aa	RIP-Chip data	2.56	□□□□□ -2	not detected
RPS9B	YBR189W	YDR274C	P87283	123 aa		2.56	□□□□□ -2
RPS9B	YBR189W	VAM10	Q08474	114 aa		2.56	□□□□□ -2
RPS9B	YBR189W	EMC6	Q12431	108 aa		2.56	□□□□□ -2
RPS9B	YBR189W	YDR381C-A	Q3E6R5	114 aa		2.56	□□□□□ -2
RPS9B	YBR189W	YOR034C-A	Q3E735	80 aa		2.56	□□□□□ -2
RPS9B	YBR189W	YNL277W-A	Q3E7Z0	62 aa		2.56	□□□□□ -2
RPS9B	YBR189W	YCR001W	P25347	104 aa		2.55	□□□□□ -2
RPS9B	YBR189W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms