RNA–Protein interactions for RNA: YBL099W

ATP1, Transcript of Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, yeast

Gene ATP1, Length 1,638 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP1	YBL099W	RPS11A	P0CX47	156 aa	Known RBP	4.28	□□□□□ -1.72
ATP1	YBL099W	RPS11B	P0CX48	156 aa	Known RBP	4.28	□□□□□ -1.72
ATP1	YBL099W	YCR041W	P37265	110 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	HUR1	P45820	110 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	PPT2	Q12036	173 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	UBC5	P15732	148 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	AIM19	P40502	157 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	YDR381C-A	Q3E6R5	114 aa		4.28	□□□□□ -1.72
ATP1	YBL099W	MRPL24	P36525	258 aa	Predicted RBP	4.27	□□□□□ -1.73
ATP1	YBL099W	YMR295C	Q03559	197 aa		4.27	□□□□□ -1.73
ATP1	YBL099W	YLR415C	O13578	112 aa		4.26	□□□□□ -1.73
ATP1	YBL099W	PBI2	P0CT04	75 aa	Known RBP	4.26	□□□□□ -1.73
ATP1	YBL099W	RPB9	P27999	122 aa		4.26	□□□□□ -1.73
ATP1	YBL099W	SMP1	P38128	452 aa		4.26	□□□□□ -1.73
ATP1	YBL099W	YAR029W	P39549	74 aa		4.26	□□□□□ -1.73
ATP1	YBL099W	ARC15	P40518	154 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
ATP1	YBL099W	RGM1	Q00453	211 aa		4.26	□□□□□ -1.73
ATP1	YBL099W	COF1	Q03048	143 aa	Known RBP	4.26	□□□□□ -1.73
ATP1	YBL099W	PBA1	Q05778	276 aa		4.25	□□□□□ -1.73
ATP1	YBL099W	YER145C-A	A0A023PYF4	145 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	RAD6	P06104	172 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	YHL042W	P38729	150 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	SVP26	P38869	228 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	COX14	P39103	70 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	YPS5	P53057	165 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	PRP8	P33334	2413 aa	Known RBP	4.24	□□□□□ -1.73
ATP1	YBL099W	YHR212W-A	P0CX91	67 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	MPC2	P38857	129 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	KRE9	P39005	276 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	RPR2	P40571	144 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	KNH1	P50112	268 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	YOR020W-A	Q3E824	90 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	YBR126W-A	Q8TGU7	68 aa		4.24	□□□□□ -1.73
ATP1	YBL099W	VAM10	Q08474	114 aa		4.23	□□□□□ -1.73
ATP1	YBL099W	YDR029W	Q12111	104 aa		4.23	□□□□□ -1.73
ATP1	YBL099W	UBC11	P52492	156 aa		4.22	□□□□□ -1.73
ATP1	YBL099W	YPL038W-A	Q3E7B4	63 aa		4.22	□□□□□ -1.73
ATP1	YBL099W	TEL1	P38110	2787 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	ECM12	O13529	151 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	YER039C-A	P0CD97	72 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	MSA2	P36157	363 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	YBR219C	P38317	127 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	YLL006W-A	Q3E814	58 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	YMR122W-A	Q3E842	84 aa		4.21	□□□□□ -1.73
ATP1	YBL099W	SHH4	Q06236	168 aa		4.21	□□□□□ -1.74
ATP1	YBL099W	YOR034C-A	Q3E735	80 aa		4.21	□□□□□ -1.74
ATP1	YBL099W	YGR240C-A	Q3E786	66 aa		4.21	□□□□□ -1.74
ATP1	YBL099W	ERI1	P62651	68 aa	Known RBP	4.2	□□□□□ -1.74
ATP1	YBL099W	YCR001W	P25347	104 aa		4.19	□□□□□ -1.74
ATP1	YBL099W	TOM6	P33448	61 aa		4.19	□□□□□ -1.74
ATP1	YBL099W	YBR144C	P34215	104 aa		4.19	□□□□□ -1.74
ATP1	YBL099W	HAL1	Q01766	294 aa		4.19	□□□□□ -1.74
ATP1	YBL099W	EMC6	Q12431	108 aa		4.18	□□□□□ -1.74
ATP1	YBL099W	YLR236C	A0A023PZG4	107 aa		4.17	□□□□□ -1.74
ATP1	YBL099W	YHL018W	P38744	120 aa	Predicted RBP	4.17	□□□□□ -1.74
ATP1	YBL099W	YJR107C-A	P0CT86	78 aa		4.17	□□□□□ -1.74
ATP1	YBL099W	RPL43A	P0CX25	92 aa	Known RBP	4.17	□□□□□ -1.74
ATP1	YBL099W	RPL43B	P0CX26	92 aa		4.17	□□□□□ -1.74
ATP1	YBL099W	YDR274C	P87283	123 aa		4.17	□□□□□ -1.74
ATP1	YBL099W	IRC21	Q04772	201 aa		4.17	□□□□□ -1.74
ATP1	YBL099W	YAL065C	O13511	128 aa		4.16	□□□□□ -1.74
ATP1	YBL099W	RPL11A	P0C0W9	174 aa	Known RBP	4.16	□□□□□ -1.74
ATP1	YBL099W	ERG28	P40030	148 aa		4.16	□□□□□ -1.74
ATP1	YBL099W	RPL11B	Q3E757	174 aa	Predicted RBP	4.16	□□□□□ -1.74
ATP1	YBL099W	YMR175W-A	Q3E766	64 aa		4.16	□□□□□ -1.74
ATP1	YBL099W	MEC1	P38111	2368 aa		4.16	□□□□□ -1.74
ATP1	YBL099W	YSY6	P38374	65 aa		4.15	□□□□□ -1.74
ATP1	YBL099W	YDL241W	Q07738	123 aa		4.15	□□□□□ -1.74
ATP1	YBL099W	CRC1	Q12289	327 aa		4.15	□□□□□ -1.74
ATP1	YBL099W	SMD1	Q02260	146 aa	Predicted RBP	4.14	□□□□□ -1.75
ATP1	YBL099W	ICY1	Q04329	127 aa		4.14	□□□□□ -1.75
ATP1	YBL099W	YCR050C	P25630	102 aa		4.13	□□□□□ -1.75
ATP1	YBL099W	RPL29	P05747	59 aa	Predicted RBP	4.13	□□□□□ -1.75
ATP1	YBL099W	MVB12	P42939	101 aa		4.13	□□□□□ -1.75
ATP1	YBL099W	MPC3	P53311	146 aa		4.13	□□□□□ -1.75
ATP1	YBL099W	YER187W	P40102	141 aa		4.12	□□□□□ -1.75
ATP1	YBL099W	RPC10	P40422	70 aa		4.12	□□□□□ -1.75
ATP1	YBL099W	SGF11	Q03067	99 aa		4.12	□□□□□ -1.75
ATP1	YBL099W	YGR035W-A	Q45U48	73 aa		4.12	□□□□□ -1.75
ATP1	YBL099W	YPR010C-A	A5Z2X5	72 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	YBR121C-A	P0C5L4	52 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	SBH1	P52870	82 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	YMR320W	Q04897	101 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	RDS3	Q06835	107 aa	Predicted RBP	4.11	□□□□□ -1.75
ATP1	YBL099W	YDR246W-A	Q3E763	66 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	YLR285C-A	Q3E771	56 aa		4.11	□□□□□ -1.75
ATP1	YBL099W	ATP18	P81450	59 aa		4.1	□□□□□ -1.75
ATP1	YBL099W	TSC3	Q3E790	80 aa		4.1	□□□□□ -1.75
ATP1	YBL099W	AQY2	P0CD90	149 aa		4.1	□□□□□ -1.75
ATP1	YBL099W	EDC1	P53080	175 aa	Predicted RBP	4.1	□□□□□ -1.75
ATP1	YBL099W	YLR156W	P0CE96	114 aa		4.09	□□□□□ -1.76
ATP1	YBL099W	YLR159W	P0CE97	114 aa		4.09	□□□□□ -1.76
ATP1	YBL099W	YLR161W	P0CE98	114 aa		4.09	□□□□□ -1.76
ATP1	YBL099W	RPL26A	P05743	127 aa	Known RBP	4.08	□□□□□ -1.76
ATP1	YBL099W	RPL33A	P05744	107 aa	Known RBP	4.08	□□□□□ -1.76
ATP1	YBL099W	RPS28B	P0C0X0	67 aa	Known RBP	4.08	□□□□□ -1.76
ATP1	YBL099W	YBL039W-B	P0C268	59 aa		4.08	□□□□□ -1.76
ATP1	YBL099W	YAL064W	P39711	94 aa		4.08	□□□□□ -1.76
ATP1	YBL099W	GAT4	P40569	121 aa		4.08	□□□□□ -1.76
ATP1	YBL099W	RPL33B	P41056	107 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms