RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W COX17Q12287 69 aa5.43□□□□□ -1.54
TOD6YBL054W YCR050CP25630 102 aa5.42□□□□□ -1.54
TOD6YBL054W YNL194CP40169 301 aa5.42□□□□□ -1.54
TOD6YBL054W SBH1P52870 82 aa5.41□□□□□ -1.54
TOD6YBL054W TOS8P53147 276 aa5.41□□□□□ -1.54
TOD6YBL054W MIG3P39943 394 aa5.4□□□□□ -1.55
TOD6YBL054W YOR020W-AQ3E824 90 aa5.4□□□□□ -1.55
TOD6YBL054W YLR236CA0A023PZG4 107 aa5.39□□□□□ -1.55
TOD6YBL054W YJR107C-AP0CT86 78 aa5.39□□□□□ -1.55
TOD6YBL054W YFR035CP43608 114 aa5.39□□□□□ -1.55
TOD6YBL054W UBC11P52492 156 aa5.39□□□□□ -1.55
TOD6YBL054W YMR295CQ03559 197 aa5.39□□□□□ -1.55
TOD6YBL054W IRC21Q04772 201 aa5.39□□□□□ -1.55
TOD6YBL054W YLR285C-AQ3E771 56 aa5.39□□□□□ -1.55
TOD6YBL054W RPR2P40571 144 aa5.38□□□□□ -1.55
TOD6YBL054W YMR244WQ04018 355 aa5.38□□□□□ -1.55
TOD6YBL054W COX14P39103 70 aa5.38□□□□□ -1.55
TOD6YBL054W YER187WP40102 141 aa5.38□□□□□ -1.55
TOD6YBL054W PMP3P87284 55 aa5.38□□□□□ -1.55
TOD6YBL054W MRPS8Q03799 155 aa5.38□□□□□ -1.55
TOD6YBL054W YAR029WP39549 74 aa5.37□□□□□ -1.55
TOD6YBL054W YLL006W-AQ3E814 58 aa5.37□□□□□ -1.55
TOD6YBL054W YBR121C-AP0C5L4 52 aa5.36□□□□□ -1.55
TOD6YBL054W YLR156WP0CE96 114 aa5.35□□□□□ -1.55
TOD6YBL054W YLR159WP0CE97 114 aa5.35□□□□□ -1.55
TOD6YBL054W YLR161WP0CE98 114 aa5.35□□□□□ -1.55
TOD6YBL054W YLR281CQ05863 155 aa5.35□□□□□ -1.55
TOD6YBL054W SPS100P13130 326 aa5.34□□□□□ -1.55
TOD6YBL054W YBR219CP38317 127 aa5.34□□□□□ -1.55
TOD6YBL054W YGL260WP53056 76 aa5.34□□□□□ -1.55
TOD6YBL054W HOR7Q05827 59 aa5.34□□□□□ -1.55
TOD6YBL054W VAM10Q08474 114 aa5.34□□□□□ -1.55
TOD6YBL054W EDC1P53080 175 aaPredicted RBP5.33□□□□□ -1.56
TOD6YBL054W MPC3P53311 146 aa5.33□□□□□ -1.56
TOD6YBL054W IRA1P18963 3092 aa5.33□□□□□ -1.56
TOD6YBL054W YIR020CP40575 100 aa5.33□□□□□ -1.56
TOD6YBL054W ATP18P81450 59 aa5.33□□□□□ -1.56
TOD6YBL054W TMC1Q08422 150 aaPredicted RBP5.33□□□□□ -1.56
TOD6YBL054W YDR246W-AQ3E763 66 aa5.33□□□□□ -1.56
TOD6YBL054W RPL11AP0C0W9 174 aaKnown RBP5.32□□□□□ -1.56
TOD6YBL054W YRA2P36036 203 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
TOD6YBL054W HAL1Q01766 294 aa5.32□□□□□ -1.56
TOD6YBL054W YMR175W-AQ3E766 64 aa5.32□□□□□ -1.56
TOD6YBL054W BET1P22804 142 aa5.31□□□□□ -1.56
TOD6YBL054W ATP20Q12233 115 aa5.31□□□□□ -1.56
TOD6YBL054W YPR117WQ06116 2489 aa5.31□□□□□ -1.56
TOD6YBL054W RPS28BP0C0X0 67 aaKnown RBP5.3□□□□□ -1.56
TOD6YBL054W ALG13P53178 202 aa5.3□□□□□ -1.56
TOD6YBL054W RPL11BQ3E757 174 aaPredicted RBP5.3□□□□□ -1.56
TOD6YBL054W RPS28AQ3E7X9 67 aaPredicted RBP5.3□□□□□ -1.56
TOD6YBL054W AIM4P38305 123 aaPredicted RBP5.29□□□□□ -1.56
TOD6YBL054W SPG4Q04438 115 aa5.29□□□□□ -1.56
TOD6YBL054W KTI11Q3E840 82 aa5.29□□□□□ -1.56
TOD6YBL054W GAT4P40569 121 aa5.29□□□□□ -1.56
TOD6YBL054W TAR1Q8TGM6 124 aa5.29□□□□□ -1.56
TOD6YBL054W RPS11AP0CX47 156 aaKnown RBP5.28□□□□□ -1.56
TOD6YBL054W RPS11BP0CX48 156 aaKnown RBP5.28□□□□□ -1.56
TOD6YBL054W RPL38P49167 78 aaKnown RBP5.28□□□□□ -1.56
TOD6YBL054W YPS5P53057 165 aa5.28□□□□□ -1.56
TOD6YBL054W RSM19P53733 91 aaPredicted RBP5.28□□□□□ -1.56
TOD6YBL054W TIM10P87108 93 aa5.27□□□□□ -1.57
TOD6YBL054W SRL1Q08673 210 aa5.27□□□□□ -1.57
TOD6YBL054W YKL183C-AQ3E765 70 aa5.27□□□□□ -1.57
TOD6YBL054W YFR009W-AP0C5M9 85 aa5.26□□□□□ -1.57
TOD6YBL054W UBC4P15731 148 aa5.26□□□□□ -1.57
TOD6YBL054W ERG28P40030 148 aa5.26□□□□□ -1.57
TOD6YBL054W ICY1Q04329 127 aa5.26□□□□□ -1.57
TOD6YBL054W KSH1Q8TGJ3 72 aa5.25□□□□□ -1.57
TOD6YBL054W TRA1P38811 3744 aa5.25□□□□□ -1.57
TOD6YBL054W TDA2P40045 126 aa5.25□□□□□ -1.57
TOD6YBL054W TSC3Q3E790 80 aa5.25□□□□□ -1.57
TOD6YBL054W YMR122W-AQ3E842 84 aa5.25□□□□□ -1.57
TOD6YBL054W RSM18P40033 138 aa5.24□□□□□ -1.57
TOD6YBL054W ERI1P62651 68 aaKnown RBP5.24□□□□□ -1.57
TOD6YBL054W YLR412C-AQ3E742 68 aa5.24□□□□□ -1.57
TOD6YBL054W YAL065CO13511 128 aa5.23□□□□□ -1.57
TOD6YBL054W RPL29P05747 59 aaPredicted RBP5.22□□□□□ -1.57
TOD6YBL054W YPL278CQ08990 100 aa5.22□□□□□ -1.57
TOD6YBL054W YOR314WQ12506 109 aa5.22□□□□□ -1.57
TOD6YBL054W YGR164WP53291 111 aa5.21□□□□□ -1.57
TOD6YBL054W TDA8Q6B2U8 126 aa5.21□□□□□ -1.57
TOD6YBL054W CRC1Q12289 327 aa5.21□□□□□ -1.58
TOD6YBL054W SPO24Q3E752 67 aa5.21□□□□□ -1.58
TOD6YBL054W NOP10Q6Q547 58 aaPredicted RBP5.21□□□□□ -1.58
TOD6YBL054W MVB12P42939 101 aa5.19□□□□□ -1.58
TOD6YBL054W YFL019CP43576 117 aa5.19□□□□□ -1.58
TOD6YBL054W YBR126W-AQ8TGU7 68 aa5.18□□□□□ -1.58
TOD6YBL054W SMD1Q02260 146 aaPredicted RBP5.17□□□□□ -1.58
TOD6YBL054W YDL241WQ07738 123 aa5.17□□□□□ -1.58
TOD6YBL054W YCR041WP37265 110 aa5.16□□□□□ -1.58
TOD6YBL054W RPL36BO14455 100 aaKnown RBP5.16□□□□□ -1.58
TOD6YBL054W RPL26AP05743 127 aaKnown RBP5.16□□□□□ -1.58
TOD6YBL054W RPL36AP05745 100 aaPredicted RBP5.16□□□□□ -1.58
TOD6YBL054W ICS3P47034 131 aa5.16□□□□□ -1.58
TOD6YBL054W RPL26BP53221 127 aaKnown RBP5.16□□□□□ -1.58
TOD6YBL054W YGR240C-AQ3E786 66 aa5.16□□□□□ -1.58
TOD6YBL054W YDR182W-AQ3E796 67 aa5.16□□□□□ -1.58
TOD6YBL054W YNL162W-AQ3E7A8 72 aa5.16□□□□□ -1.58
TOD6YBL054W YMR320WQ04897 101 aa5.14□□□□□ -1.59
TOD6YBL054W YOL014WQ08110 124 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms