RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	MRX7	P53869	86 aa		3	□□□□□ -1.93
ECM1	YAL059W	SRB8	P25648	1427 aa		3	□□□□□ -1.93
ECM1	YAL059W	ACC1	Q00955	2233 aa	Known RBP	3	□□□□□ -1.93
ECM1	YAL059W	URB1	P34241	1764 aa	Known RBP	3	□□□□□ -1.93
ECM1	YAL059W	TY4B-H	P0C2J7	1802 aa		2.99	□□□□□ -1.93
ECM1	YAL059W	PAU6	P0CE90	120 aa		2.99	□□□□□ -1.93
ECM1	YAL059W	PAU18	P0CE91	120 aa		2.99	□□□□□ -1.93
ECM1	YAL059W	SSS1	P35179	80 aa		2.99	□□□□□ -1.93
ECM1	YAL059W	YBR292C	P38357	123 aa		2.99	□□□□□ -1.93
ECM1	YAL059W	BRR2	P32639	2163 aa	Known RBP	2.98	□□□□□ -1.93
ECM1	YAL059W	YDR210W	Q03482	75 aa		2.98	□□□□□ -1.93
ECM1	YAL059W	LCL2	Q08045	131 aa		2.98	□□□□□ -1.93
ECM1	YAL059W	YPL038W-A	Q3E7B4	63 aa		2.98	□□□□□ -1.93
ECM1	YAL059W	PDR12	Q02785	1511 aa		2.98	□□□□□ -1.93
ECM1	YAL059W	TY2B-LR1	P0C2J3	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-F	P0CX63	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-GR2	P0CX64	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-C	P25384	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-DR2	Q03494	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-DR3	Q07791	1770 aa	Known RBP	2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-OR1	Q12113	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-DR1	Q12472	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-B	Q12491	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	TY2B-OR2	Q12501	1770 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	MOT1	P32333	1867 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	PAU23	Q07987	124 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	YOL131W	Q08270	108 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	PAU17	Q12370	124 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	YOR314W	Q12506	109 aa		2.97	□□□□□ -1.93
ECM1	YAL059W	UFD4	P33202	1483 aa		2.96	□□□□□ -1.93
ECM1	YAL059W	MRPS12	P53732	153 aa		2.96	□□□□□ -1.94
ECM1	YAL059W	UTP10	P42945	1769 aa	Known RBP	2.96	□□□□□ -1.94
ECM1	YAL059W	YKL065W-A	Q2V2P2	73 aa		2.95	□□□□□ -1.94
ECM1	YAL059W	YFL041W-A	Q3E817	63 aa		2.95	□□□□□ -1.94
ECM1	YAL059W	IQG1	Q12280	1495 aa		2.95	□□□□□ -1.94
ECM1	YAL059W	RPO21	P04050	1733 aa	Known RBP	2.94	□□□□□ -1.94
ECM1	YAL059W	YER188C-A	P0C0V2	99 aa		2.94	□□□□□ -1.94
ECM1	YAL059W	AIM19	P40502	157 aa		2.94	□□□□□ -1.94
ECM1	YAL059W	YJL009W	P47078	108 aa		2.94	□□□□□ -1.94
ECM1	YAL059W	COX12	Q01519	83 aa		2.94	□□□□□ -1.94
ECM1	YAL059W	YGR240C-A	Q3E786	66 aa		2.94	□□□□□ -1.94
ECM1	YAL059W	MYO4	P32492	1471 aa		2.93	□□□□□ -1.94
ECM1	YAL059W	YOR105W	Q08504	108 aa		2.93	□□□□□ -1.94
ECM1	YAL059W	VPS15	P22219	1454 aa		2.92	□□□□□ -1.94
ECM1	YAL059W	MPC2	P38857	129 aa		2.92	□□□□□ -1.94
ECM1	YAL059W	BSC4	P53841	131 aa		2.92	□□□□□ -1.94
ECM1	YAL059W	YAL065C	O13511	128 aa		2.91	□□□□□ -1.94
ECM1	YAL059W	PDX3	P38075	228 aa	Known RBP	2.91	□□□□□ -1.94
ECM1	YAL059W	YNL122C	P53921	115 aa	Predicted RBP	2.91	□□□□□ -1.94
ECM1	YAL059W	YNR034W-A	Q3E841	98 aa		2.91	□□□□□ -1.94
ECM1	YAL059W	SPO14	P36126	1683 aa		2.91	□□□□□ -1.94
ECM1	YAL059W	PAU4	P53427	120 aa		2.9	□□□□□ -1.95
ECM1	YAL059W	PAU1	P0CE88	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	PAU14	P0CE89	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	PAU8	P0CE92	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	PAU11	P0CE93	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	RPS11A	P0CX47	156 aa	Known RBP	2.89	□□□□□ -1.95
ECM1	YAL059W	RPS11B	P0CX48	156 aa	Known RBP	2.89	□□□□□ -1.95
ECM1	YAL059W	PAU13	P38725	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	APC1	P53886	1748 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	PAU10	Q03050	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	PAU9	Q3E770	120 aa		2.89	□□□□□ -1.95
ECM1	YAL059W	YNL198C	P40166	100 aa		2.88	□□□□□ -1.95
ECM1	YAL059W	YGR121W-A	Q3E816	71 aa		2.88	□□□□□ -1.95
ECM1	YAL059W	MRPL31	P14063	131 aa	Predicted RBP	2.87	□□□□□ -1.95
ECM1	YAL059W	VMA9	Q3E7B6	73 aa		2.87	□□□□□ -1.95
ECM1	YAL059W	TIM12	P32830	109 aa		2.86	□□□□□ -1.95
ECM1	YAL059W	YDR010C	Q12426	110 aa		2.86	□□□□□ -1.95
ECM1	YAL059W	RIM15	P43565	1770 aa		2.86	□□□□□ -1.95
ECM1	YAL059W	QCR9	P22289	66 aa		2.85	□□□□□ -1.95
ECM1	YAL059W	SSK2	P53599	1579 aa		2.85	□□□□□ -1.95
ECM1	YAL059W	YHR212W-A	P0CX91	67 aa		2.84	□□□□□ -1.95
ECM1	YAL059W	PAU20	Q08322	120 aa		2.84	□□□□□ -1.95
ECM1	YAL059W	COX19	Q3E731	98 aa		2.84	□□□□□ -1.95
ECM1	YAL059W	HAP1	P0CE41	1502 aa		2.83	□□□□□ -1.96
ECM1	YAL059W	IML1	P47170	1584 aa		2.83	□□□□□ -1.96
ECM1	YAL059W	YLR255C	O13574	117 aa		2.83	□□□□□ -1.96
ECM1	YAL059W	YOR072W	Q08486	104 aa		2.83	□□□□□ -1.96
ECM1	YAL059W	YIL134C-A	Q45U18	67 aa		2.83	□□□□□ -1.96
ECM1	YAL059W	PDR5	P33302	1511 aa	Known RBP	2.83	□□□□□ -1.96
ECM1	YAL059W	YCF1	P39109	1515 aa	Known RBP	2.83	□□□□□ -1.96
ECM1	YAL059W	YIL156W-B	Q2V2P4	73 aa		2.82	□□□□□ -1.96
ECM1	YAL059W	NOP10	Q6Q547	58 aa	Predicted RBP	2.82	□□□□□ -1.96
ECM1	YAL059W	FPR2	P32472	135 aa		2.81	□□□□□ -1.96
ECM1	YAL059W	YGR035W-A	Q45U48	73 aa		2.81	□□□□□ -1.96
ECM1	YAL059W	SNQ2	P32568	1501 aa	Known RBP	2.81	□□□□□ -1.96
ECM1	YAL059W	DNF3	Q12674	1656 aa		2.81	□□□□□ -1.96
ECM1	YAL059W	YHR173C	P38864	112 aa		2.8	□□□□□ -1.96
ECM1	YAL059W	YAR064W	P39563	99 aa		2.8	□□□□□ -1.96
ECM1	YAL059W	YIL102C-A	Q2V2P5	75 aa		2.79	□□□□□ -1.96
ECM1	YAL059W	SPI1	P40092	148 aa		2.78	□□□□□ -1.96
ECM1	YAL059W	YIL086C	P40503	102 aa		2.78	□□□□□ -1.96
ECM1	YAL059W	LCL1	Q02786	101 aa		2.78	□□□□□ -1.96
ECM1	YAL059W	BPH1	P25356	2167 aa		2.78	□□□□□ -1.96
ECM1	YAL059W	HFA1	P32874	2273 aa		2.77	□□□□□ -1.97
ECM1	YAL059W	SEC16	P48415	2195 aa	Known RBP	2.77	□□□□□ -1.97
ECM1	YAL059W	AQY2	P0CD90	149 aa		2.77	□□□□□ -1.97
ECM1	YAL059W	YCR001W	P25347	104 aa		2.77	□□□□□ -1.97
ECM1	YAL059W	MGR2	Q02889	113 aa		2.77	□□□□□ -1.97
ECM1	YAL059W	SPT6	P23615	1451 aa	Known RBP	2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms