RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C MRPL39P36533 70 aa5.58□□□□□ -1.52
CCR4YAL021C YMR122CQ03879 124 aa5.58□□□□□ -1.52
CCR4YAL021C YOL118CQ08259 102 aa5.58□□□□□ -1.52
CCR4YAL021C FYV12Q08559 129 aa5.58□□□□□ -1.52
CCR4YAL021C YPR108W-AQ3E7B3 70 aa5.58□□□□□ -1.52
CCR4YAL021C YBL071CP38185 102 aa5.57□□□□□ -1.52
CCR4YAL021C OST5Q92316 86 aa5.57□□□□□ -1.52
CCR4YAL021C HMRA2P0CY13 119 aa5.56□□□□□ -1.52
CCR4YAL021C YNL190WP53872 204 aa5.56□□□□□ -1.52
CCR4YAL021C YOL014WQ08110 124 aa5.56□□□□□ -1.52
CCR4YAL021C YGR045CP53229 120 aa5.56□□□□□ -1.52
CCR4YAL021C PRM7Q12459 698 aa5.56□□□□□ -1.52
CCR4YAL021C RPR2P40571 144 aa5.55□□□□□ -1.52
CCR4YAL021C COA3Q3E7B2 85 aa5.55□□□□□ -1.52
CCR4YAL021C MSA2P36157 363 aa5.55□□□□□ -1.52
CCR4YAL021C YLR194CQ05777 254 aa5.54□□□□□ -1.52
CCR4YAL021C YPR153WQ06537 140 aa5.54□□□□□ -1.52
CCR4YAL021C BLM10P43583 2143 aa5.54□□□□□ -1.52
CCR4YAL021C MPC3P53311 146 aa5.54□□□□□ -1.52
CCR4YAL021C TRS23Q03784 219 aa5.54□□□□□ -1.52
CCR4YAL021C SRL1Q08673 210 aa5.54□□□□□ -1.52
CCR4YAL021C RGM1Q00453 211 aa5.53□□□□□ -1.52
CCR4YAL021C MGR2Q02889 113 aa5.53□□□□□ -1.52
CCR4YAL021C NOP10Q6Q547 58 aaPredicted RBP5.53□□□□□ -1.52
CCR4YAL021C YER145C-AA0A023PYF4 145 aa5.52□□□□□ -1.53
CCR4YAL021C RPS23AP0CX29 145 aaKnown RBP5.52□□□□□ -1.53
CCR4YAL021C RPS23BP0CX30 145 aa5.52□□□□□ -1.53
CCR4YAL021C QCR10P37299 77 aa5.52□□□□□ -1.53
CCR4YAL021C PCL5P38794 229 aa5.52□□□□□ -1.53
CCR4YAL021C FIT2Q08906 153 aa5.52□□□□□ -1.53
CCR4YAL021C YOL029CQ08187 201 aa5.51□□□□□ -1.53
CCR4YAL021C BRR2P32639 2163 aaKnown RBP5.5□□□□□ -1.53
CCR4YAL021C YOR020W-AQ3E824 90 aa5.5□□□□□ -1.53
CCR4YAL021C IRC19Q07843 230 aa5.49□□□□□ -1.53
CCR4YAL021C YKL065W-AQ2V2P2 73 aa5.49□□□□□ -1.53
CCR4YAL021C UTH1P36135 365 aa5.48□□□□□ -1.53
CCR4YAL021C YMR141CP40211 102 aa5.48□□□□□ -1.53
CCR4YAL021C HOT13P36078 116 aa5.48□□□□□ -1.53
CCR4YAL021C YOL166W-AQ8TGJ1 51 aa5.47□□□□□ -1.53
CCR4YAL021C RPS30AP0CX33 63 aaKnown RBP5.46□□□□□ -1.53
CCR4YAL021C RPS30BP0CX34 63 aaKnown RBP5.46□□□□□ -1.53
CCR4YAL021C KRE9P39005 276 aa5.46□□□□□ -1.53
CCR4YAL021C EDC2P40023 145 aaPredicted RBP5.46□□□□□ -1.53
CCR4YAL021C FHN1P53279 174 aa5.46□□□□□ -1.53
CCR4YAL021C MRPS12P53732 153 aa5.46□□□□□ -1.53
CCR4YAL021C LIP1Q03579 150 aa5.46□□□□□ -1.53
CCR4YAL021C IRC21Q04772 201 aa5.46□□□□□ -1.53
CCR4YAL021C YIR020CP40575 100 aa5.46□□□□□ -1.54
CCR4YAL021C YIL156W-BQ2V2P4 73 aa5.46□□□□□ -1.54
CCR4YAL021C YOR032W-AQ8TGS1 66 aa5.46□□□□□ -1.54
CCR4YAL021C RPL36BO14455 100 aaKnown RBP5.45□□□□□ -1.54
CCR4YAL021C RPL36AP05745 100 aaPredicted RBP5.45□□□□□ -1.54
CCR4YAL021C SHU1P38751 150 aa5.45□□□□□ -1.54
CCR4YAL021C DAD4P69851 72 aa5.45□□□□□ -1.54
CCR4YAL021C SOM1Q05676 74 aa5.45□□□□□ -1.54
CCR4YAL021C ATP15P21306 62 aa5.45□□□□□ -1.54
CCR4YAL021C YFL015CP43578 164 aa5.45□□□□□ -1.54
CCR4YAL021C SPC1P46965 94 aa5.45□□□□□ -1.54
CCR4YAL021C TVP23P38962 199 aa5.44□□□□□ -1.54
CCR4YAL021C RRT1P38192 103 aa5.43□□□□□ -1.54
CCR4YAL021C REE1P40893 198 aa5.43□□□□□ -1.54
CCR4YAL021C YOR034C-AQ3E735 80 aa5.43□□□□□ -1.54
CCR4YAL021C YDR182W-AQ3E796 67 aa5.42□□□□□ -1.54
CCR4YAL021C MRPL38P35996 138 aaPredicted RBP5.42□□□□□ -1.54
CCR4YAL021C TOS6P48560 102 aa5.42□□□□□ -1.54
CCR4YAL021C GLT1Q12680 2145 aaKnown RBP5.41□□□□□ -1.54
CCR4YAL021C SEN1Q00416 2231 aaKnown RBP5.41□□□□□ -1.54
CCR4YAL021C HSP150P32478 413 aa5.41□□□□□ -1.54
CCR4YAL021C YAR023CD6VPM8 179 aa5.4□□□□□ -1.55
CCR4YAL021C YCR043CP25361 127 aa5.4□□□□□ -1.55
CCR4YAL021C YHL037CP38733 133 aa5.39□□□□□ -1.55
CCR4YAL021C YBL008W-AQ3E821 79 aa5.38□□□□□ -1.55
CCR4YAL021C YER175W-AQ8TGU4 54 aa5.37□□□□□ -1.55
CCR4YAL021C ARC15P40518 154 aaRIP-Chip data5.35□□□□□ -1.55not detected
CCR4YAL021C COX23P38824 151 aa5.35□□□□□ -1.55
CCR4YAL021C RPL38P49167 78 aaKnown RBP5.34□□□□□ -1.55
CCR4YAL021C YJR107C-AP0CT86 78 aa5.34□□□□□ -1.56
CCR4YAL021C YDR010CQ12426 110 aa5.34□□□□□ -1.56
CCR4YAL021C CCW14O13547 238 aa5.33□□□□□ -1.56
CCR4YAL021C MRP10O75012 95 aa5.33□□□□□ -1.56
CCR4YAL021C YDL241WQ07738 123 aa5.33□□□□□ -1.56
CCR4YAL021C YPL278CQ08990 100 aa5.33□□□□□ -1.56
CCR4YAL021C YGL258W-AQ3E740 77 aa5.33□□□□□ -1.56
CCR4YAL021C YMR244WQ04018 355 aa5.31□□□□□ -1.56
CCR4YAL021C YOR008C-AQ3E7B9 74 aa5.31□□□□□ -1.56
CCR4YAL021C YCR095W-AQ3E787 52 aa5.3□□□□□ -1.56
CCR4YAL021C RPS11AP0CX47 156 aaKnown RBP5.3□□□□□ -1.56
CCR4YAL021C RPS11BP0CX48 156 aaKnown RBP5.3□□□□□ -1.56
CCR4YAL021C YNL042W-BQ3E7Z2 85 aa5.29□□□□□ -1.56
CCR4YAL021C YCR022CP25620 114 aa5.29□□□□□ -1.56
CCR4YAL021C POR2P40478 281 aa5.29□□□□□ -1.56
CCR4YAL021C MRX7P53869 86 aa5.29□□□□□ -1.56
CCR4YAL021C BEM2P39960 2167 aaKnown RBP5.28□□□□□ -1.56
CCR4YAL021C URM1P40554 99 aaPredicted RBP5.28□□□□□ -1.56
CCR4YAL021C YGL149WP53116 101 aa5.28□□□□□ -1.56
CCR4YAL021C YJL197C-AP0C5P0 93 aa5.27□□□□□ -1.57
CCR4YAL021C MRPS8Q03799 155 aa5.27□□□□□ -1.57
CCR4YAL021C RTC6O14464 93 aa5.27□□□□□ -1.57
CCR4YAL021C YLR236CA0A023PZG4 107 aa5.26□□□□□ -1.57
CCR4YAL021C YCR041WP37265 110 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms