RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZNF280AP59817 542 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-233ENST00000642021 LAMTOR4Q0VGL1 99 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 GRM1Q13255 1194 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 EEPD1Q7L9B9 569 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 FNIP1Q8TF40 1166 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 LRRN4Q8WUT4 740 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 ZBTB10Q96DT7 871 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
PHGDH-233ENST00000642021 PIK3R2O00459 728 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 NDC80O14777 642 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 PRKCBP05771 671 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 KRT19P08727 400 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 DLDP09622 509 aaKnown RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 POLR2BP30876 1174 aaKnown RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 ARFIP2P53365 341 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 PRKD1Q15139 912 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 ANO7Q6IWH7 933 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 APBB1IPQ7Z5R6 666 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 TRIM50Q86XT4 487 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 SLC44A1Q8WWI5 657 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 ALKBH8Q96BT7 664 aaKnown RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 TMEM120AQ9BXJ8 343 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 LHX5Q9H2C1 402 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 USP18Q9UMW8 372 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 TEX264Q9Y6I9 313 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 GSC2O15499 205 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 TRUB2O95900 331 aaKnown RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 TCF7P36402 384 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 EEF1DP3Q658K8 133 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 BTBD10Q9BSF8 475 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 ASCC2Q9H1I8 757 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-233ENST00000642021 SYNCQ9H7C4 482 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 SLC24A3Q9HC58 644 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 CNTN3Q9P232 1028 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 SIX4Q9UIU6 781 aa14.44□□□□□ -0.1
PHGDH-233ENST00000642021 HAUS5O94927 633 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 C1QAP02745 245 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 YWHAGP61981 247 aaKnown RBP eCLIP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 ZNF200P98182 395 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 SLC18A2Q05940 514 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 CAPRIN2Q6IMN6 1127 aaKnown RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 TRNP1Q6NT89 227 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 RINLQ6ZS11 566 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 SKA1Q96BD8 255 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 C12orf42Q96LP6 360 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 FRMD8P1Q9BZ68 369 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 ZNF112Q9UJU3 913 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 PCNTO95613 3336 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 FAM237BA0A1B0GVD1 139 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 MCF2LO15068 1137 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 CCDC22O60826 627 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 MAP3K6O95382 1288 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 EFNA5P52803 228 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 DARS2Q6PI48 645 aaKnown RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 CYP4V2Q6ZWL3 525 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.43□□□□□ -0.15e-6■■■■■ 81.8
PHGDH-233ENST00000642021 SLC4A11Q8NBS3 891 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 NSL1Q96IY1 281 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
PHGDH-233ENST00000642021 SMYD3Q9H7B4 428 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 TAS2R1Q9NYW7 299 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 ARMCX1Q9P291 453 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 SIP14410 1827 aa14.43□□□□□ -0.1
PHGDH-233ENST00000642021 A6NHS1 94 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CXorf49A8MYA2 514 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 E7ENQ6 273 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CXCL8P10145 99 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 SESN3P58005 492 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 KCNJ11Q14654 390 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 LY6KQ17RY6 165 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 HSF5Q4G112 596 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 ACSBG2Q5FVE4 666 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 FAXCQ5TGI0 409 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CES4AQ5XG92 561 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CDCA2Q69YH5 1023 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 APOPT1Q96IL0 206 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 MECRQ9BV79 373 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 ELOVL4Q9GZR5 314 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 VPS33BQ9H267 617 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 ZNF395Q9H8N7 513 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 PLAC1Q9HBJ0 212 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 PTPRHQ9HD43 1115 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 IQANK1A0A1B0GTG1 560 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 ZBTB42B2RXF5 422 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 INHBAP08476 426 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 MYL2P10916 166 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 NEFHP12036 1026 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CDH6P55285 790 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CDK16Q00536 496 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 KPNB1Q14974 876 aaKnown RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 C15orf59Q2T9L4 293 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 C1orf228Q6PIY5 440 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CHSY1Q86X52 802 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms