RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 RAD9AQ99638 391 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 COLEC11Q9BWP8 271 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
PHGDH-221ENST00000641573 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 LCMT1Q9UIC8 334 aa13.8□□□□□ -0.2
PHGDH-221ENST00000641573 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-221ENST00000641573 ABHD14A-ACY1A0A1B0GW23 586 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 MYBPHLA2RUH7 354 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 PIK3R2O00459 728 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 CLDN5O00501 218 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 NRP1O14786 923 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 CEP104O60308 925 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 TADA2AO75478 443 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 UPP2O95045 317 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 KRT3P12035 628 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 MAN1A1P33908 653 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 SLC11A1P49279 550 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 ERVK-21P61565 698 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 HFE2Q6ZVN8 426 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 FAM183BPQ6ZVS7 135 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 TMCO2Q7Z6W1 182 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-221ENST00000641573 TMEM110Q86TL2 294 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 TSC1Q92574 1164 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 KRT35Q92764 455 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 GOLGA1Q92805 767 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 DUSP16Q9BY84 665 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
PHGDH-221ENST00000641573 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
PHGDH-221ENST00000641573 CCDC66A2RUB6 948 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 XPO1O14980 1071 aaKnown RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 TRAPPC3O43617 180 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 GABBR2O75899 941 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 GJB5O95377 273 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 ALDH2P05091 517 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 CTNNA1P35221 906 aaKnown RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 PEX5P50542 639 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 SLC8A3P57103 927 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 PLCB3Q01970 1234 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 OGDHQ02218 1023 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 NAA30Q147X3 362 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 TEX35Q5T0J7 233 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-221ENST00000641573 LRRC43Q8N309 656 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 JOSD2Q8TAC2 188 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 UBXN4Q92575 508 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 ALG3Q92685 438 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 RPGRIP1Q96KN7 1286 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 HSFY1Q96LI6 401 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 PRKAG3Q9UGI9 489 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
PHGDH-221ENST00000641573 LINC01553A4QN01 128 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 EFCAB14O75071 495 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 AMHP03971 560 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 GALTP07902 379 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 FAM200BP0CF97 657 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 NPR3P17342 541 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 PSMA2P25787 234 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 RFC1P35251 1148 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-221ENST00000641573 ACADSBP45954 432 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 PLA2G4AP47712 749 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
PHGDH-221ENST00000641573 TSC2P49815 1807 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 RNASE9P60153 205 aaKnown RBP13.77□□□□□ -0.21
PHGDH-221ENST00000641573 DEFB103AP81534 67 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 TSPY1Q01534 308 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 SLC6A3Q01959 620 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 YWHAHQ04917 246 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF252P-AS1Q0IIN9 211 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-221ENST00000641573 ERCC6LQ2NKX8 1250 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 DCAF12L1Q5VU92 463 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 FAM171BQ6P995 826 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 MICAL3Q7RTP6 2002 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
PHGDH-221ENST00000641573 RASGEF1CQ8N431 466 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms