RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 GUCY2DQ02846 1103 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF252P-AS1Q0IIN9 211 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 KLF1Q13351 362 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MTMR3Q13615 1198 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MTFR1Q15390 333 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 TAZQ16635 292 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MDH1BQ5I0G3 518 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CNKSR3Q6P9H4 555 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC137Q6PK04 289 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 RTN4RL1Q86UN2 441 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 PIGZQ86VD9 579 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC105Q8IYK2 499 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 LRRC43Q8N309 656 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MREGQ8N565 214 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 PRELID2Q8N945 189 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC89Q8N998 374 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 DBF4BQ8NFT6 615 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CMASQ8NFW8 434 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 ATL2Q8NHH9 583 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 JOSD2Q8TAC2 188 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 AENQ8WTP8 325 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 LINC01599Q8WXQ3 324 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CEP295NLQ96MC4 621 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 SLC9A7Q96T83 725 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 ERP44Q9BS26 406 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 DDX23Q9BUQ8 820 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CSNK1G1Q9HCP0 422 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 DMAP1Q9NPF5 467 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 TBC1D13Q9NVG8 400 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 SMARCAL1Q9NZC9 954 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 OGFRQ9NZT2 677 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 RCOR3Q9P2K3 495 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MTRF1LQ9UGC7 380 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 AMACRQ9UHK6 382 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 DMGDHQ9UI17 866 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 NME7Q9Y5B8 376 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MICAL3Q7RTP6 2002 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 SF3B1O75533 1304 aaKnown RBP eCLIP10.18□□□□□ -0.788e-6■■■■■ 107
PHGDH-215ENST00000641371 LRRD1A4D1F6 860 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 H7C4K7 107 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MAP2K7O14733 419 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 TADA2AO75478 443 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 OAZ2O95190 189 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 TRUB2O95900 331 aaKnown RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 F9P00740 461 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 ALDH2P05091 517 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 RARAP10276 462 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 RALAP11233 206 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MIPP30301 263 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MATKP42679 507 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 OR1G1P47890 313 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 RGS7P49802 495 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 OGDHQ02218 1023 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 IKBKEQ14164 716 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 RAB41Q5JT25 222 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 CLLU1OSQ5K130 101 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 LLGL2Q6P1M3 1020 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 CLEC20AQ6ZU45 233 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 JAMLQ86YT9 394 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 KCTD6Q8NC69 237 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 C3orf58Q8NDZ4 430 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 C2orf15Q8WU43 125 aaKnown RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 CENPIQ92674 756 aaPredicted RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 PCED1BQ96HM7 432 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF670Q9BS34 389 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MAK16Q9BXY0 300 aaKnown RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 FOXP3Q9BZS1 431 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 DCLK3Q9C098 648 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 POPDC2Q9HBU9 364 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 MED4Q9NPJ6 270 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 KRT82Q9NSB4 513 aa10.18□□□□□ -0.78
PHGDH-215ENST00000641371 DRG1Q9Y295 367 aaKnown RBP10.18□□□□□ -0.78
PHGDH-215ENST00000641371 PTPRDP23468 1912 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 hCG_1818297A0A087WSY0 165 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SMAPO00193 183 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CLTBP09497 229 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 KDELR1P24390 212 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CDKN2BP42772 138 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 MAGEA11P43364 429 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 YWHAZP63104 245 aaKnown RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SLC7A5Q01650 507 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 FAAP100Q0VG06 881 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CALCOCO2Q13137 446 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 MTA1Q13330 715 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 HLTFQ14527 1009 aaKnown RBP eCLIP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CASP8Q14790 479 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 PPP1R7Q15435 360 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SIX1Q15475 284 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SLC25A52Q3SY17 297 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC14Q49A88 953 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 HSP90B2PQ58FF3 399 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms