RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CMASQ8NFW8 434 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-208ENST00000641023 CFAP57Q96MR6 1250 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 UROC1Q96N76 676 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 GRHL1Q9NZI5 618 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 INPP5FQ9Y2H2 1132 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 C3orf70A6NLC5 250 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 EOMESO95936 686 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 LCP1P13796 627 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 NPR3P17342 541 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 PLCB3Q01970 1234 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TAF5Q15542 800 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 CDO1Q16878 200 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TRNP1Q6NT89 227 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 SLC24A5Q71RS6 500 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ZNF598Q86UK7 904 aaKnown RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 FBXO25Q8TCJ0 367 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 KHSRPQ92945 711 aaKnown RBP eCLIP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ZIM3Q96PE6 472 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 PAAF1Q9BRP4 392 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.11■□□□□ 0.495e-8■■□□□ 14.4
PHGDH-208ENST00000641023 ASIC3Q9UHC3 531 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 GABBR2O75899 941 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ODC1P11926 461 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TKTP29401 623 aaKnown RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ATP11AP98196 1134 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 GABPB1Q06547 395 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 DHX9Q08211 1270 aaKnown RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 PTK6Q13882 451 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 BYSLQ13895 437 aaKnown RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 C15orf59Q2T9L4 293 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TIGD5Q53EQ6 642 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 SH3PXD2AQ5TCZ1 1133 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TRAF7Q6Q0C0 670 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ZNF365Q70YC5 407 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TMC3Q7Z5M5 1100 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 PIGZQ86VD9 579 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 CCDC89Q8N998 374 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 SPATA18Q8TC71 538 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 HSPH1Q92598 858 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 SYT15Q9BQS2 421 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 MED10Q9BTT4 135 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 WHRNQ9P202 907 aa18.11■□□□□ 0.49
PHGDH-208ENST00000641023 TIMM13Q9Y5L4 95 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-208ENST00000641023 LIASO43766 372 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 ITIH2P19823 946 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 PCSK1P29120 753 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 HSD17B3P37058 310 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 HTRA3P83110 453 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 BOLA3Q53S33 107 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 EFHC1Q5JVL4 640 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 ZDHHC24Q6UX98 284 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 GSTA5Q7RTV2 222 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 TTC13Q8NBP0 860 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 RIN2Q8WYP3 895 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-208ENST00000641023 FTHL17Q9BXU8 183 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
PHGDH-208ENST00000641023 VPS18Q9P253 973 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 CDH9Q9ULB4 789 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 RNF40O75150 1001 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 MBTPS1Q14703 1052 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 SPDYCQ5MJ68 293 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 GLB1LQ6UWU2 654 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 METTL23Q86XA0 190 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 MAP7D3Q8IWC1 876 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 FAM172AQ8WUF8 416 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 ART4Q93070 314 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 FAM118BQ9BPY3 351 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 FRMD8P1Q9BZ68 369 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-208ENST00000641023 ZNF148Q9UQR1 794 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 CEP350Q5VT06 3117 aa18.1■□□□□ 0.49
PHGDH-208ENST00000641023 C9IYK1 514 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 CLDN5O00501 218 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 INPPL1O15357 1258 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 FAM200BP0CF97 657 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 PTPN9P43378 593 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 TAZQ16635 292 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 KIAA0319Q5VV43 1072 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 SCYL2Q6P3W7 929 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 PAQR9Q6ZVX9 377 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 CCHCR1Q8TD31 782 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 SH3TC2Q8TF17 1288 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 UBLCP1Q8WVY7 318 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-208ENST00000641023 KCTD13Q8WZ19 329 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 SNF8Q96H20 258 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 TBCBQ99426 244 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 SH3GL2Q99962 352 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 CALN1Q9BXU9 219 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 CRTAC1Q9NQ79 661 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 DSEQ9UL01 958 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 DNPEPQ9ULA0 475 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 DRG1Q9Y295 367 aaKnown RBP18.09■□□□□ 0.49
PHGDH-208ENST00000641023 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
PHGDH-208ENST00000641023 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 DNM1LO00429 736 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 CST8O60676 142 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 PPFIA2O75334 1257 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 ADCY8P40145 1251 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms