RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 GRIN2DO15399 1336 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PIK3R2O00459 728 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CFLARO15519 480 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PEX1O43933 1283 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PMLP29590 882 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 KCNA1Q09470 495 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 BRDTQ58F21 947 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 TMTC4Q5T4D3 741 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 MZT2BQ6NZ67 158 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CAMK1DQ8IU85 385 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 FBXL13Q8NEE6 735 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SGF29Q96ES7 293 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 VMP1Q96GC9 406 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 UTYO14607 1347 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 DNM1LO00429 736 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 PPEF1O14829 653 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 EPHB2P29323 1055 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 CCT3P49368 545 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 KDSRQ06136 332 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 BTKQ06187 659 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RASA2Q15283 850 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 WDR45BQ5MNZ6 344 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 MICU2Q8IYU8 434 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RTL3Q8N8U3 475 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 SPERTQ8NA61 448 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM206Q9H813 350 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 CNOT8Q9UFF9 292 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 SLC12A6Q9UHW9 1150 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 CEMIPQ8WUJ3 1361 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 JCADQ9P266 1359 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 C15orf38-AP3S2A0A0A6YYH1 394 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 H0YCG3 227 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF701M0R085 212 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RHOBTB3O94955 611 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 EIF2AK2P19525 551 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 PRKACBP22694 351 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GRAPQ13588 217 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 SQLEQ14534 574 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 MEA1Q16626 185 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 SETD9Q8NE22 299 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FAM13CQ8NE31 585 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 WDR36Q8NI36 951 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ASPSCR1Q9BZE9 553 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 IGSF9Q9P2J2 1179 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 HPSEQ9Y251 543 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 STXBP5LQ9Y2K9 1186 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GPR75-ASB3A0A0A6YYF3 556 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 MYMKA6NI61 221 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FAM25EA8MYX2 175 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 APOL3O95236 402 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FTLP02792 175 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ABHD2P08910 425 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GRK3P35626 688 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 IREB2P48200 963 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TOB1P50616 345 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ATP13A5Q4VNC0 1218 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 BROXQ5VW32 411 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 DNAJC24Q6P3W2 148 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 BRINP3Q76B58 766 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 RNF135Q8IUD6 432 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 SFRP1Q8N474 314 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TNIP3Q96KP6 325 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF570Q96NI8 536 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM79Q9BSE2 394 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ADAM33Q9BZ11 813 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 CYP26B1Q9NR63 512 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ZMAT5Q9UDW3 170 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 APPL1Q9UKG1 709 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ASB3Q9Y575 518 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 LZTS3O60299 673 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GH2P01242 217 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM253P0C7T8 217 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FGFR4P22455 802 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ALDH1A3P47895 512 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 PPIL2Q13356 520 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 MEI1Q5TIA1 1274 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FAM122CQ6P4D5 195 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 ADGRG6Q86SQ4 1221 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 E2F7Q96AV8 911 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 NSUN4Q96CB9 384 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 DDX56Q9NY93 547 aaKnown RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 MAGED2Q9UNF1 606 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-227ENST00000640648 FRMPD4Q14CM0 1322 aa8.56□□□□□ -1.04
NECAP1-227ENST00000640648 DLC1Q96QB1 1528 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
NECAP1-227ENST00000640648 OPLAHO14841 1288 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms