RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	MYBL1	P10243	752 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	GRIK1	P39086	918 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	MAGEA11	P43364	429 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	SMARCB1	Q12824	385 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	MAMLD1	Q13495	774 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	RAB41	Q5JT25	222 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	PLEKHA7	Q6IQ23	1121 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	VSTM1	Q6UX27	236 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	SCN4B	Q8IWT1	228 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	GPR152	Q8TDT2	470 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	IPO4	Q8TEX9	1081 aa	Known RBP	18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	GDPD5	Q8WTR4	605 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	KCTD13	Q8WZ19	329 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	KLHL5	Q96PQ7	755 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	MIS12	Q9H081	205 aa		18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	AVEN	Q9NQS1	362 aa	Predicted RBP	18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421	AFF4	Q9UHB7	1163 aa	Known RBP	18.7	■□□□□ 0.58
SPIN3-238	ENST00000640421		A0A0A6YYK5	440 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TNFRSF10B	O14763	440 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	CCP110	O43303	1012 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	ATF2	P15336	505 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SMC1A	Q14683	1233 aa	Known RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	OLFML1	Q6UWY5	402 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	C2orf15	Q8WU43	125 aa	Known RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	NDRG1	Q92597	394 aa	Known RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TIFA	Q96CG3	184 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	MCRS1	Q96EZ8	462 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TRIM11	Q96F44	468 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SEPT5	Q99719	369 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	NUP85	Q9BW27	656 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TSGA10	Q9BZW7	698 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	CYLD	Q9NQC7	956 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SSX2IP	Q9Y2D8	614 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	CAPN6	Q9Y6Q1	641 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	GOLGA8S	H3BPF8	625 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	MOCS3	O95396	460 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SPATA31D3	P0C874	917 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	HAPLN1	P10915	354 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	ATF6	P18850	670 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	GSC	P56915	257 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SMAD3	P84022	425 aa	Known RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	CREM	Q03060	361 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TAF5	Q15542	800 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	MGAT5B	Q3V5L5	792 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	PPP1R15B	Q5SWA1	713 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	LIN9	Q5TKA1	542 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	TPGS2	Q68CL5	300 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SPATA31D4	Q6ZUB0	917 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	C3orf20	Q8ND61	904 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	SCAMP5	Q8TAC9	235 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	C8orf48	Q96LL4	319 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	UBXN6	Q9BZV1	441 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	CTTNBP2NL	Q9P2B4	639 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	STRIP2	Q9ULQ0	834 aa		18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	COL4A4	P53420	1690 aa	Predicted RBP	18.69	■□□□□ 0.58
SPIN3-238	ENST00000640421	XIRP2	A4UGR9	3374 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	TGM5	O43548	720 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	TKTL1	P51854	596 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	RPL7A	P62424	266 aa	Known RBP	18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	ZNF268	Q14587	947 aa	Predicted RBP	18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	OR6B2	Q6IFH4	312 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	TXLNB	Q8N3L3	684 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	MSANTD4	Q8NCY6	345 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	MICAL1	Q8TDZ2	1067 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	BTBD6	Q96KE9	485 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	PNPLA8	Q9NP80	782 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	NGRN	Q9NPE2	291 aa	Known RBP	18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	GREB1	Q4ZG55	1949 aa		18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.68	■□□□□ 0.58
SPIN3-238	ENST00000640421	GOLGA6L9	A6NEM1	432 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	RFXAP	O00287	272 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	ACADSB	P45954	432 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	SLC5A3	P53794	718 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	TCEAL1	Q15170	157 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	DNAJC24	Q6P3W2	148 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	LILRA6	Q6PI73	481 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	NYAP1	Q6ZVC0	841 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	JOSD2	Q8TAC2	188 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	ZNF564	Q8TBZ8	553 aa	Predicted RBP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	ULBP1	Q9BZM6	244 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	GOLPH3	Q9H4A6	298 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	CYP4F11	Q9HBI6	524 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	LRRC4	Q9HBW1	653 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	METTL5	Q9NRN9	209 aa	Known RBP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	PARVA	Q9NVD7	372 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	TRIM66	O15016	1216 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	FANCG	O15287	622 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	MTA2	O94776	668 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	NOP2	P46087	812 aa	Known RBP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	USP46	P62068	366 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	FAM102A	Q5T9C2	384 aa	Predicted RBP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	BHLHA9	Q7RTU4	235 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	RHOT2	Q8IXI1	618 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	C16orf45	Q96MC5	204 aa	Predicted RBP	18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	UVRAG	Q9P2Y5	699 aa		18.67	■□□□□ 0.58
SPIN3-238	ENST00000640421	ZNF500	O60304	480 aa	Predicted RBP	18.66	■□□□□ 0.58
SPIN3-238	ENST00000640421	GRAP2	O75791	330 aa		18.66	■□□□□ 0.58
SPIN3-238	ENST00000640421	ADH1A	P07327	375 aa		18.66	■□□□□ 0.58
SPIN3-238	ENST00000640421	USP17L7	P0C7H9	530 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms