RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 KCNA3P22001 575 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 SREBF1P36956 1147 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 MRNIPQ6NTE8 343 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 FBXO36Q8NEA4 188 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 ILKAPQ9H0C8 392 aaPredicted RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 AAR2Q9Y312 384 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 DUSP10Q9Y6W6 482 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 S100A5P33763 92 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 NUDT2P50583 147 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 DDX39BQ13838 428 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 PLEKHM3Q6ZWE6 761 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 DIS3LQ8TF46 1054 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 PACSIN1Q9BY11 444 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 OLFML3Q9NRN5 406 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 TTLL13PA6NNM8 815 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 H2AFYO75367 372 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 GUCA1CO95843 209 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 TMEM132BQ14DG7 1078 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 DENND1BQ6P3S1 775 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 KLF15Q9UIH9 416 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 LRRIQ3A6PVS8 624 aaPredicted RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 CYTH3O43739 400 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 KDM1AO60341 852 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 PTPAQ15257 358 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 EPS8L3Q8TE67 593 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 FAM136AQ96C01 138 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 PNKPQ96T60 521 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 RBBP8Q99708 897 aa15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 THUMPD3Q9BV44 507 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 EXOSC4Q9NPD3 245 aaKnown RBP15.24■□□□□ 0.03
HNRNPU-226ENST00000640218 ZC3H11AO75152 810 aaKnown RBP eCLIP15.23■□□□□ 0.035e-7■■□□□ 13.1
HNRNPU-226ENST00000640218 MLNP12872 115 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 RAG1P15918 1043 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 CAPZA2P47755 286 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 KLC1Q07866 573 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 DAB2IPQ5VWQ8 1189 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 CD302Q8IX05 232 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 ZFP42Q96MM3 310 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 REREQ9P2R6 1566 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.032e-8■□□□□ 8.3
HNRNPU-226ENST00000640218 APOA4P06727 396 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 MRPL28Q13084 256 aaKnown RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 TMEM154Q6P9G4 183 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 PXMP2Q9NR77 195 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 DEAF1O75398 565 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 TARSP26639 723 aaKnown RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 IRAK1P51617 712 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 TP53BP2Q13625 1128 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 OOSP2Q86WS3 158 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 BBS7Q8IWZ6 715 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 IARS2Q9NSE4 1012 aaKnown RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 PTPRUQ92729 1446 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 USP13Q92995 863 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 CGRRF1Q99675 332 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 SCN3BQ9NY72 215 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 ALOX15P16050 662 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 PDK2Q15119 407 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 GALNTL6Q49A17 601 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 SLC47A2Q86VL8 602 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 TUBGCP3Q96CW5 907 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
HNRNPU-226ENST00000640218 COPAP53621 1224 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 OTUD4Q01804 1114 aaKnown RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 DNAJC7Q99615 494 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 DCDC2Q9UHG0 476 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 EIF3LQ9Y262 564 aaKnown RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 LZTS3O60299 673 aaPredicted RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 GLRBP48167 497 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 TIGD7Q6NT04 549 aaPredicted RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 DLC1Q96QB1 1528 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 SDR42E2A6NKP2 422 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 GLRA3O75311 464 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 PBLDP30039 288 aaPredicted RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 SERPINB5P36952 375 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 BCAT1P54687 386 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 MRPS15P82914 257 aaKnown RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 PTGISQ16647 500 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 LRRC6Q86X45 466 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 F8W810 466 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 GARTP22102 1010 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 PRIM2P49643 509 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 EFEMP1Q12805 493 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 P3H2Q8IVL5 708 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 FRMD8P1Q9BZ68 369 aaPredicted RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 USP18Q9UMW8 372 aa15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
HNRNPU-226ENST00000640218 GSNP06396 782 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms