RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 XYLT2Q9H1B5 865 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ELAC1Q9H777 363 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 NLRC4Q9NPP4 1024 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM161AQ9NX61 479 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 DPP3Q9NY33 737 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 TUBGCP4Q9UGJ1 667 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 AJAP1Q9UKB5 411 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 ITGA11Q9UKX5 1188 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 UBQLN1Q9UMX0 589 aaKnown RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 FHOD1Q9Y613 1164 aa8.5□□□□□ -1.05
SCARB2-220ENST00000640076 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-220ENST00000640076 INPPL1O15357 1258 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 XPOTO43592 962 aaKnown RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 DNAJC8O75937 253 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 MYL6P60660 151 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 NOP14P78316 857 aaKnown RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 SOX4Q06945 474 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 TRPC3Q13507 836 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 IQCEQ6IPM2 695 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 LRRC69Q6ZNQ3 347 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 MMS22LQ6ZRQ5 1243 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 CACNA2D4Q7Z3S7 1137 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 CRIPAKQ8N1N5 446 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM199Q8N511 208 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 ZSCAN1Q8NBB4 408 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF397Q8NF99 534 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 BEST2Q8NFU1 509 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 SKA1Q96BD8 255 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 ELMO3Q96BJ8 720 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 MPP4Q96JB8 637 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 NT5C1BQ96P26 610 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 IMPG2Q9BZV3 1241 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 RETREG1Q9H6L5 497 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 MIOSQ9NXC5 875 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 ZFATQ9P243 1243 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 KANSL3Q9P2N6 904 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 LTBP2Q14767 1821 aa8.49□□□□□ -1.05
SCARB2-220ENST00000640076 TDRD15B5MCY1 1934 aaKnown RBP8.49□□□□□ -1.05
SCARB2-220ENST00000640076 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 OFD1O75665 1012 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 THP07101 528 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PFKMP08237 780 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 KRT19P08727 400 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 FGFR1P11362 822 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 CYP3A5P20815 502 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 POLR2BP30876 1174 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SCNN1GP51170 649 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 RBP5P82980 135 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 IKBKEQ14164 716 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 GRM3Q14832 879 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 NAB2Q15742 525 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SGSM1Q2NKQ1 1148 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF699Q32M78 642 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 CLLU1OSQ5K130 101 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SPOPLQ6IQ16 392 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 GLB1LQ6UWU2 654 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 RRAGAQ7L523 313 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 LRRC8AQ8IWT6 810 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 C7orf61Q8IZ16 206 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 OR8K1Q8NGG5 319 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 KAT5Q92993 513 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PANX2Q96RD6 677 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 TTC1Q99614 292 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 HTATIP2Q9BUP3 242 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 STK33Q9BYT3 514 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 CXorf56Q9H5V9 222 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 APOBEC3GQ9HC16 384 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 UBE2TQ9NPD8 197 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ABHD10Q9NUJ1 306 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SLC38A7Q9NVC3 462 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 POLG2Q9UHN1 485 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 DNAJC12Q9UKB3 198 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PNMA8BQ9ULN7 279 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PHTF1Q9UMS5 762 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 AGAP1Q9UPQ3 857 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ABHD14A-ACY1A0A1B0GW23 586 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 LRRC53A6NM62 1247 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ADH1AP07327 375 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ITPKAP23677 461 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ATICP31939 592 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 JAM2P57087 298 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 GCNT1Q02742 428 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SEPT7Q16181 437 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 C9orf57Q5W0N0 161 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 E4F1Q66K89 784 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM214Q6NUQ4 689 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PDXDC1Q6P996 788 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 TAF4BQ92750 862 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 HPDLQ96IR7 371 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 SPAG5Q96R06 1193 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 GPR88Q9GZN0 384 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 NUCKS1Q9H1E3 243 aaKnown RBP8.48□□□□□ -1.05
SCARB2-220ENST00000640076 GOLGA2P5Q9HBQ8 144 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 ARHGEF4Q9NR80 690 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 MYO6Q9UM54 1294 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 FAM50BQ9Y247 325 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 PCDHB7Q9Y5E2 793 aa8.48□□□□□ -1.05
SCARB2-220ENST00000640076 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms