RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 DALRD3Q5D0E6 543 aaKnown RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 CC2D1BQ5T0F9 858 aaKnown RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 RANBP10Q6VN20 620 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 C11orf74Q86VG3 221 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 CKAP2LQ8IYA6 745 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 WDSUB1Q8N9V3 476 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 JPH3Q8WXH2 748 aaPredicted RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 RAB24Q969Q5 203 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 TMX3Q96JJ7 454 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 CNPPD1Q9BV87 410 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 METTL14Q9HCE5 456 aaKnown RBP1.28□□□□□ -2.2
LMBR1-222ENST00000638959 THSD1Q9NS62 852 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 HIF1ANQ9NWT6 349 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 PLK2Q9NYY3 685 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 MSRB1Q9NZV6 116 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 PCDHA12Q9UN75 941 aa1.28□□□□□ -2.2
LMBR1-222ENST00000638959 PPP1R3DO95685 299 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 HOXC6P09630 235 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 MYCLP12524 364 aaPredicted RBP1.27□□□□□ -2.21
LMBR1-222ENST00000638959 PHKG2P15735 406 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 SDSP20132 328 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 ERCC5P28715 1186 aaPredicted RBP1.27□□□□□ -2.21
LMBR1-222ENST00000638959 IL2P60568 153 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 PSMC1P62191 440 aaKnown RBP1.27□□□□□ -2.21
LMBR1-222ENST00000638959 MRPS9P82933 396 aaKnown RBP1.27□□□□□ -2.21
LMBR1-222ENST00000638959 ACSM2AQ08AH3 577 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 MALLQ13021 153 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 BFSP2Q13515 415 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 NUGGCQ68CJ6 796 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 C16orf82Q7Z2V1 217 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 ARMC9Q7Z3E5 817 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 RSPH3Q86UC2 560 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 RASSF3Q86WH2 238 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 RHOT1Q8IXI2 618 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.27□□□□□ -2.21
LMBR1-222ENST00000638959 SMC1BQ8NDV3 1235 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 OR2I1PQ8NGU4 316 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 SCAMP4Q969E2 229 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 ACAP3Q96P50 834 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 EPYCQ99645 322 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 C1QTNF4Q9BXJ3 329 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 IGSF9Q9P2J2 1179 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 GABRQQ9UN88 632 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 DNM3Q9UQ16 869 aa1.27□□□□□ -2.21
LMBR1-222ENST00000638959 A0A1W2PPC1 479 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 SLC16A5O15375 505 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 PRKCBP05771 671 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 TACR3P29371 465 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 LSSP48449 732 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 PCYT1AP49585 367 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 PDLIM4P50479 330 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 NEK4P51957 841 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 ZNF135P52742 658 aaPredicted RBP1.26□□□□□ -2.21
LMBR1-222ENST00000638959 COPB1P53618 953 aaKnown RBP1.26□□□□□ -2.21
LMBR1-222ENST00000638959 CYP1B1Q16678 543 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 ARHGAP40Q5TG30 622 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 DPY19L3Q6ZPD9 716 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 LPAR1Q92633 364 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 SLC5A5Q92911 643 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 C7orf25Q9BPX7 421 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 TINF2Q9BSI4 451 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 PRO0461Q9UI25 63 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 PTCH2Q9Y6C5 1203 aa1.26□□□□□ -2.21
LMBR1-222ENST00000638959 LOC102724159A0A0B4J2E5 919 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 RPS10-NUDT3A0A1W2PQS6 291 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 C2CD4BA6NLJ0 364 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 BMPR1BO00238 502 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 INPPL1O15357 1258 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 TLX3O43711 291 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 KIF20AO95235 890 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 ZBTB11O95625 1053 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 CHEK2O96017 543 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 CD63P08962 238 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 MTHFD2P13995 350 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 TOB1P50616 345 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 PSG6Q00889 435 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 CRYZQ08257 329 aaKnown RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 HABP2Q14520 560 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 KCNB1Q14721 858 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 PWP2Q15269 919 aaKnown RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 ANO4Q32M45 955 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 AASDHQ4L235 1098 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 VSTM1Q6UX27 236 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 DCDC5Q6ZRR9 648 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 CREB3L2Q70SY1 520 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 KRTAP7-1Q8IUC3 87 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 DCUN1D3Q8IWE4 304 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 RFLNBQ8N5W9 214 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 SLC44A5Q8NCS7 719 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 SOCS4Q8WXH5 440 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 TRMT61AQ96FX7 289 aaKnown RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 HS6ST2Q96MM7 605 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 FEZ1Q99689 392 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 ACO2Q99798 780 aaKnown RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 FZD3Q9NPG1 666 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 PLEKHB1Q9UF11 243 aaPredicted RBP1.25□□□□□ -2.21
LMBR1-222ENST00000638959 AMFRQ9UKV5 643 aa1.25□□□□□ -2.21
LMBR1-222ENST00000638959 SSX2IPQ9Y2D8 614 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms