RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 GLIS1Q8NBF1 620 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 DNAJB3Q8WWF6 145 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 PRCCQ92733 491 aaPredicted RBP11.13□□□□□ -0.63
SPIN3-216ENST00000638940 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 SGK1O00141 431 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 IGF2BP3O00425 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPIN3-216ENST00000638940 MDM4O15151 490 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 HIC1Q14526 733 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 TAF1CQ15572 869 aaPredicted RBP11.13□□□□□ -0.63
SPIN3-216ENST00000638940 SV2CQ496J9 727 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 CCDC14Q49A88 953 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 TRNP1Q6NT89 227 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 CENPUQ71F23 418 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 RFX6Q8HWS3 928 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 ANKRD52Q8NB46 1076 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 ACSF2Q96CM8 615 aaPredicted RBP11.13□□□□□ -0.63
SPIN3-216ENST00000638940 CHMP6Q96FZ7 201 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 PEBP4Q96S96 227 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 NXF3Q9H4D5 531 aaKnown RBP11.13□□□□□ -0.63
SPIN3-216ENST00000638940 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 NME7Q9Y5B8 376 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 FAM169AQ9Y6X4 670 aa11.13□□□□□ -0.63
SPIN3-216ENST00000638940 PPEF2O14830 753 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 MCF2LO15068 1137 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TOMM70O94826 608 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 RPLP2P05387 115 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TGM2P21980 687 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 LRPAP1P30533 357 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 BCAT1P54687 386 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 HUNKP57058 714 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 PLCB3Q01970 1234 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TMEM62Q0P6H9 643 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 LONRF1Q17RB8 773 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TAF2Q6P1X5 1199 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 C6orf89Q6UWU4 347 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 ACOT1Q86TX2 421 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TOP6BLQ8N6T0 577 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 ARHGEF2Q92974 986 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 C18orf25Q96B23 403 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 ZNF317Q96PQ6 595 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TMEM121Q9BTD3 319 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 PRDM16Q9HAZ2 1276 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TRIP12Q14669 1992 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 CFAP69A5D8W1 941 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 KPNA7A9QM74 516 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 ANKRD65E5RJM6 399 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 E7ESA3 106 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TREHO43280 583 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 MYL3P08590 195 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 DRD4P21917 467 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 WARSP23381 471 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 TAF6P49848 677 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 NKX3-2P78367 333 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 SLC26A9Q7LBE3 791 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 C12orf29Q8N999 325 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 RNF157Q96PX1 679 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 SELENOSQ9BQE4 189 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 MAK16Q9BXY0 300 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 SAYSD1Q9NPB0 183 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 UBN1Q9NPG3 1134 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 PCSK1NQ9UHG2 260 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
SPIN3-216ENST00000638940 PIN4Q9Y237 131 aaKnown RBP11.12□□□□□ -0.63
SPIN3-216ENST00000638940 A8MXQ7 604 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 CD48P09326 243 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 ZSCAN5DPP0CG00 497 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 SDC4P31431 198 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
SPIN3-216ENST00000638940 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 SLC18A1P54219 525 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
SPIN3-216ENST00000638940 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
SPIN3-216ENST00000638940 NAT8LQ8N9F0 302 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 TMEM40Q8WWA1 233 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 P3H4Q92791 437 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 RTP4Q96DX8 246 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 ZMYND8Q9ULU4 1186 aaPredicted RBP11.11□□□□□ -0.63
SPIN3-216ENST00000638940 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
SPIN3-216ENST00000638940 PAPSS1O43252 624 aaPredicted RBP11.11□□□□□ -0.63
SPIN3-216ENST00000638940 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms