RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 MRGPRX1Q96LB2 322 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 SMAD5Q99717 465 aaKnown RBP4.39□□□□□ -1.71
CCDC7-211ENST00000638889 PIH1D1Q9NWS0 290 aaKnown RBP4.39□□□□□ -1.71
CCDC7-211ENST00000638889 ASIC5Q9NY37 505 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 WWOXQ9NZC7 414 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 LRP12Q9Y561 859 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 SNX14Q9Y5W7 946 aa4.39□□□□□ -1.71
CCDC7-211ENST00000638889 A0A087WWL8 130 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 A0A088AWK7 358 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 PSMD9O00233 223 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 RNF8O76064 485 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 MT-CO3P00414 261 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 GKP32189 559 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 EVA1CP58658 441 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
CCDC7-211ENST00000638889 LY6KQ17RY6 165 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 TRIM71Q2Q1W2 868 aaKnown RBP4.38□□□□□ -1.71
CCDC7-211ENST00000638889 ZIK1Q3SY52 487 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-211ENST00000638889 DENND2CQ68D51 928 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 LMBRD2Q68DH5 695 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-211ENST00000638889 PNISRQ8TF01 805 aaKnown RBP4.38□□□□□ -1.71
CCDC7-211ENST00000638889 HPS3Q969F9 1004 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 CHMP4CQ96CF2 233 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 C1GALT1C1Q96EU7 318 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 SIGLEC11Q96RL6 698 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 MAP3K14Q99558 947 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 ZSCAN32Q9NX65 697 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 ZMYM2Q9UBW7 1377 aa4.38□□□□□ -1.71
CCDC7-211ENST00000638889 PMPCBO75439 489 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 ABLIM3O94929 683 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 PRKAG1P54619 331 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 FGL2Q14314 439 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 CERCAMQ5T4B2 595 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 ANO7Q6IWH7 933 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 DPY19L3Q6ZPD9 716 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 SLC15A4Q8N697 577 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 CELF5Q8N6W0 485 aaKnown RBP4.37□□□□□ -1.71
CCDC7-211ENST00000638889 DNAJC5GQ8N7S2 189 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 OSR1Q8TAX0 266 aaPredicted RBP4.37□□□□□ -1.71
CCDC7-211ENST00000638889 ADAMTS15Q8TE58 950 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 KBTBD7Q8WVZ9 684 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 CGRRF1Q99675 332 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
CCDC7-211ENST00000638889 CPA4Q9UI42 421 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 LUC7L2Q9Y383 392 aaKnown RBP4.37□□□□□ -1.71
CCDC7-211ENST00000638889 FER1L4A9Z1Z3 1794 aa4.37□□□□□ -1.71
CCDC7-211ENST00000638889 TTC3P53804 2025 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PRR23D1E9PI22 279 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 CES2O00748 559 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 ADAM10O14672 748 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 CNOT3O75175 753 aaKnown RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 ALDH2P05091 517 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PRR23D2P0DMB1 279 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 HOXD9P28356 352 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 ARFIP2P53365 341 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PSG6Q00889 435 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 CCNIQ14094 377 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 LEXMQ3ZCV2 418 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PLA1AQ53H76 456 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 ATAT1Q5SQI0 421 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 KIAA1161Q6NSJ0 714 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PTCHD4Q6ZW05 846 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 MEPCEQ7L2J0 689 aaKnown RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 LIX1LQ8IVB5 337 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 PLBD2Q8NHP8 589 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 BPIFB1Q8TDL5 484 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 MAP4K1Q92918 833 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 LYZL4Q96KX0 146 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 C17orf80Q9BSJ5 609 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 FOXP1Q9H334 677 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-211ENST00000638889 POT1Q9NUX5 634 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 MAFFQ9ULX9 164 aa4.36□□□□□ -1.71
CCDC7-211ENST00000638889 CCDC187A0A096LP49 1063 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 CD8B2A6NJW9 211 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 TLR2O60603 784 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 VNN1O95497 513 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 THBS3P49746 956 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 BCAT1P54687 386 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 RAB1AP62820 205 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 ID2Q02363 134 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 LMAN2Q12907 356 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 LARS2Q15031 903 aaKnown RBP4.35□□□□□ -1.71
CCDC7-211ENST00000638889 MLC1Q15049 377 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-211ENST00000638889 ZNF783Q6ZMS7 281 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 ZBTB46Q86UZ6 589 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 LINC01465Q8N7H1 131 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 PPP2R3CQ969Q6 453 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 TRIM54Q9BYV2 358 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 DPH1Q9BZG8 443 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 ARMT1Q9H993 441 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 PCDH12Q9NPG4 1184 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 SNX15Q9NRS6 342 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 DRG1Q9Y295 367 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms