RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TEX264Q9Y6I9 313 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 RNF8O76064 485 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 EGFRP00533 1210 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 MRPS35P82673 323 aaKnown RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZBTB16Q05516 673 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 CBLBQ13191 982 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 MTM1Q13496 603 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 IGDCC3Q8IVU1 814 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 APLFQ8IW19 511 aaPredicted RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 EMC1Q8N766 993 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM111AQ96PZ2 611 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 CPXM1Q96SM3 734 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 ALG13Q9NP73 1137 aaKnown RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 SPATS2LQ9NUQ6 558 aaKnown RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 PCSK1NQ9UHG2 260 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 POLIQ9UNA4 740 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 LCTP09848 1927 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 KBTBD13C9JR72 458 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 MYCNP04198 464 aaPredicted RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 DLDP09622 509 aaKnown RBP21■□□□□ 0.95
SYNGAP1-227ENST00000638142 MIPP30301 263 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 PCK1P35558 622 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 ROR1Q01973 937 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 KBTBD12Q3ZCT8 623 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM160B1Q5W0V3 765 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 ANKRD36BP1Q96IX9 119 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 PPME1Q9Y570 386 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 SSC5DA1L4H1 1573 aa21■□□□□ 0.95
SYNGAP1-227ENST00000638142 C19orf81C9J6K1 198 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 SOCS7O14512 581 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 KLF11O14901 512 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 GSC2O15499 205 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 PRKCBP05771 671 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 NEFHP12036 1026 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 UBA1P22314 1058 aaKnown RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 SERPINB3P29508 390 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 STAT5BP51692 787 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAAP100Q0VG06 881 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 KCNJ11Q14654 390 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 NBPF12Q5TAG4 269 aaPredicted RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 IER5Q5VY09 327 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 RFWD3Q6PCD5 774 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZBTB8OSQ8IWT0 167 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 DNAJC9Q8WXX5 260 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 HSPH1Q92598 858 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 CALN1Q9BXU9 219 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 MMADHCQ9H3L0 296 aaPredicted RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 PNPLA8Q9NP80 782 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 CNTN3Q9P232 1028 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 USP18Q9UMW8 372 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 CHADO15335 359 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 GYG2O15488 501 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 B4GALT4O60513 344 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 TRUB2O95900 331 aaKnown RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 ERBB2P04626 1255 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 NOMO1Q15155 1222 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 KHDC1Q4VXA5 237 aaKnown RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM91A1Q658Y4 838 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 CCDC62Q6P9F0 684 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 CATSPERGQ6ZRH7 1159 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 TTC17Q96AE7 1141 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 NXF1Q9UBU9 619 aaKnown RBP20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZNF112Q9UJU3 913 aa20.99■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM155BO75949 473 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 FARP2O94887 1054 aaPredicted RBP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 PYGBP11216 843 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 YWHAGP61981 247 aaKnown RBP eCLIP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 DARS2Q6PI48 645 aaKnown RBP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 BCO2Q9BYV7 579 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 FRMD8Q9BZ67 464 aaPredicted RBP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 ITGBL1O95965 494 aaPredicted RBP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 BGNP21810 368 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 SERPINB4P48594 390 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 DSTYKQ6XUX3 929 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 SLC26A11Q86WA9 606 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 MCRS1Q96EZ8 462 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 FBXO6Q9NRD1 293 aaPredicted RBP20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 ASNSD1Q9NWL6 643 aa20.98■□□□□ 0.95
SYNGAP1-227ENST00000638142 KCNA3P22001 575 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 VHLP40337 213 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 PEX19P40855 299 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 MXD4Q14582 209 aaPredicted RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 LBRQ14739 615 aaKnown RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 TAF5Q15542 800 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 APBB1IPQ7Z5R6 666 aaPredicted RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 SLC4A11Q8NBS3 891 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 MCUR1Q96AQ8 359 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 DPPA5A6NC42 116 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 ENDOD1O94919 500 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 GABRB2P47870 512 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 LAMTOR4Q0VGL1 99 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 FSTL1Q12841 308 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 TFDP2Q14188 446 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 CCDC6Q16204 474 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 MUM1Q2TAK8 710 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 FAM47CQ5HY64 1035 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZNF667Q5HYK9 610 aa20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 TTC39BQ5VTQ0 682 aaPredicted RBP20.97■□□□□ 0.95
SYNGAP1-227ENST00000638142 MPZL3Q6UWV2 235 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms