RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 K7EPI3 171 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 SNAP23O00161 211 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 BMP10O95393 424 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 PABPC1P11940 636 aaKnown RBP12.5□□□□□ -0.41
CAPN3-221ENST00000638141 SERPINB6P35237 376 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 C21orf59P57076 290 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 PDIA2Q13087 525 aaKnown RBP12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ZFP1Q6P2D0 407 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 PCYOX1LQ8NBM8 494 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 HM13Q8TCT9 377 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ANO3Q9BYT9 981 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 ACSS3Q9H6R3 686 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 VPS37BQ9H9H4 285 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 TRNAU1APQ9NX07 287 aaKnown RBP12.5□□□□□ -0.41
CAPN3-221ENST00000638141 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 TIMM22Q9Y584 194 aa12.5□□□□□ -0.41
CAPN3-221ENST00000638141 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 I3L4J1 428 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 KLHL2O95198 593 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 TXNL4AP83876 142 aaKnown RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 ADGRE1Q14246 886 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 ANKDD1AQ495B1 522 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 GPR180Q86V85 440 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PPM1KQ8N3J5 372 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PTCD2Q8WV60 388 aaKnown RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PIGSQ96S52 555 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 DMAC2Q9NW81 257 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 APPL1Q9UKG1 709 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CARD8Q9Y2G2 431 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PSME4Q14997 1843 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CYP3A7-CYP3A51PA0A087WV96 503 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 TRIM64BA6NI03 449 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 SDR42E2A6NKP2 422 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PRR5-ARHGAP8B1AHC4 643 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 KDM1AO60341 852 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 LPXNO60711 386 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 BGNP21810 368 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CYP3A7P24462 503 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 ARHGAP8P85298 464 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CETN1Q12798 172 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PSMD6Q15008 389 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PARP10Q53GL7 1025 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 SPTY2D1Q68D10 685 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CHERPQ8IWX8 916 aaKnown RBP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 POU5F2Q8N7G0 328 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PSD2Q9BQI7 771 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 HIPK3Q9H422 1215 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 EPS15L1Q9UBC2 864 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
CAPN3-221ENST00000638141 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
CAPN3-221ENST00000638141 C2orf71A6NGG8 1288 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 E5RJQ4 531 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 FOXN3O00409 490 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 TBX3O15119 743 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PFDN6O15212 129 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PMM2O15305 246 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 TGFB1I1O43294 461 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 AQP9O43315 295 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 DGKIO75912 1065 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PARNO95453 639 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 VDRP11473 427 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PHKG1Q16816 387 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 IYDQ6PHW0 289 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SH2D5Q6ZV89 423 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 AMIGO2Q86SJ2 522 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SLC9A9Q8IVB4 645 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 TRIML2Q8N7C3 387 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF420Q8TAQ5 688 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ADAMTS16Q8TE57 1224 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SLC20A1Q8WUM9 679 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 DOK1Q99704 481 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 OSBPL10Q9BXB5 764 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms