RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 MYOZ2Q9NPC6 264 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 NR5A2O00482 541 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 USP1O94782 785 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 EYA4O95677 639 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 PRKAG1P54619 331 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 AVENQ9NQS1 362 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 TRMT6Q9UJA5 497 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 CBX4O00257 560 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 NDUFB10O96000 172 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 IFNA16P05015 189 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 TRAF2Q12933 501 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 SH2D3CQ8N5H7 860 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 RPRD1AQ96P16 312 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 TRABDQ9H4I3 376 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 POLR1BQ9H9Y6 1135 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 PDZK1P1A8MUH7 402 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 DNAJC3Q13217 504 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 ACSL4O60488 711 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 EFEMP1Q12805 493 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 FNDC3BQ53EP0 1204 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 TAF8Q7Z7C8 310 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 CACTIN-AS1Q8N1I8 211 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 JSRP1Q96MG2 331 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 S100A13Q99584 98 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 VWA5AO00534 786 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 SRP54P61011 504 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 ABCE1P61221 599 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 DMTNQ08495 405 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 EIF2B5Q13144 721 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 POLD3Q15054 466 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 PARK7Q99497 189 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 ZNF624Q9P2J8 865 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 WBP11Q9Y2W2 641 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 FGRP09769 529 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 CYP2C9P11712 490 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 CAV1Q03135 178 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 SNX17Q15036 470 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 EPHA7Q15375 998 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 ULK3Q6PHR2 472 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 C9orf72Q96LT7 481 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 MAP3K4Q9Y6R4 1608 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 POMCP01189 267 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 IRX2Q9BZI1 471 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 SCAMP1O15126 338 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 RHAGQ02094 409 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 EMBQ6PCB8 327 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 GLB1LQ6UWU2 654 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 KRCC1Q9NPI7 259 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 TCF7P36402 384 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 STX4Q12846 297 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 GPAT2Q6NUI2 795 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 TPGS1Q6ZTW0 290 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 NSUN4Q96CB9 384 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
CACNA1A-253ENST00000637927 RRM2P31350 389 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 STX12Q86Y82 276 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 C19orf18Q8NEA5 215 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PRKAG3Q9UGI9 489 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 MGAT4DA6NG13 374 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 CCNT2O60583 730 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 ZNF23P17027 643 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 RGS4P49798 205 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 TFAP2DQ7Z6R9 452 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 SEC16BQ96JE7 1060 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 TAAR1Q96RJ0 339 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PRRG4Q9BZD6 226 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 DYRK1BQ9Y463 629 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 DPEP1P16444 411 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 STX3Q13277 289 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 FAAH2Q6GMR7 532 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 USP7Q93009 1102 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 CELF4Q9BZC1 486 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 WDCPQ9H6R7 721 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 APEX2Q9UBZ4 518 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 SH3GLB1Q9Y371 365 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PPP2R3BQ9Y5P8 575 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PSMD9O00233 223 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 CTSEP14091 401 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 C16orf46Q6P387 395 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 ERI2A8K979 691 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 DYNC1I2Q13409 638 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 AP5B1Q2VPB7 878 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PTAR1Q7Z6K3 402 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 ULK2Q8IYT8 1036 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 RCOR2Q8IZ40 523 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 MIEF1Q9NQG6 463 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 GPATCH2LQ9NWQ4 482 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 PTK7Q13308 1070 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 SGCGQ13326 291 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 EZH2Q15910 746 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 ZC3H15Q8WU90 426 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 MYLK2Q9H1R3 596 aa17.55■□□□□ 0.4
CACNA1A-253ENST00000637927 USP11P51784 963 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 C12orf60Q5U649 245 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms