RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SLITRK1Q96PX8 696 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 PARD6AQ9NPB6 346 aa21.36■■□□□ 1.01
CLN6-222ENST00000637667 ANAPC1Q9H1A4 1944 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 ATP8B3O60423 1300 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 LEFTY2O00292 366 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 ABL1P00519 1130 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 FBXO43Q4G163 708 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 CEP135Q66GS9 1140 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 NUP93Q8N1F7 819 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 CD101Q93033 1021 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 CCDC47Q96A33 483 aaKnown RBP21.35■■□□□ 1.01
CLN6-222ENST00000637667 TNIP3Q96KP6 325 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 RNF38Q9H0F5 515 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 SDCBP2Q9H190 292 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 SLC8A2Q9UPR5 921 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 FRMD4BQ9Y2L6 1034 aa21.35■■□□□ 1.01
CLN6-222ENST00000637667 ATG2BQ96BY7 2078 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 CALUO43852 315 aaPredicted RBP21.34■■□□□ 1.01
CLN6-222ENST00000637667 KIF20AO95235 890 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 NFATC1O95644 943 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 OLFM2O95897 454 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 OAS1P00973 400 aaKnown RBP21.34■■□□□ 1.01
CLN6-222ENST00000637667 PRR29P0C7W0 189 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 P4HA1P13674 534 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 YWHAQP27348 245 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 IFRD2Q12894 506 aaPredicted RBP21.34■■□□□ 1.01
CLN6-222ENST00000637667 SGSM1Q2NKQ1 1148 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 CEP68Q76N32 757 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 SV2AQ7L0J3 742 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 FAM35AQ86V20 835 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 MED10Q9BTT4 135 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 SCAND2PQ9GZW5 306 aaPredicted RBP21.34■■□□□ 1.01
CLN6-222ENST00000637667 TRAF3IP3Q9Y228 551 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 ATP6V1DQ9Y5K8 247 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 CPQQ9Y646 472 aa21.34■■□□□ 1.01
CLN6-222ENST00000637667 A0A1W2PQ27 194 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 A0A1W2PQ64 194 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 A0A1W2PQD8 194 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 PRR5-ARHGAP8B1AHC4 643 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 IKBKBO14920 756 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 RHOBTB3O94955 611 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 RTN3O95197 1032 aaPredicted RBP21.33■■□□□ 1.01
CLN6-222ENST00000637667 ARHGAP8P85298 464 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 SPEM2Q0P670 501 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 C1orf220Q5T0J3 134 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 PAQR9Q6ZVX9 377 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.33■■□□□ 1.01
CLN6-222ENST00000637667 ACOT1Q86TX2 421 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 KIAA1958Q8N8K9 716 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 TAF4BQ92750 862 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 EZH1Q92800 747 aaPredicted RBP21.33■■□□□ 1.01
CLN6-222ENST00000637667 FBXO32Q969P5 355 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 KCNK16Q96T55 309 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 DMAP1Q9NPF5 467 aaPredicted RBP21.33■■□□□ 1.01
CLN6-222ENST00000637667 SMPD4Q9NXE4 827 aa21.33■■□□□ 1.01
CLN6-222ENST00000637667 CCDC163A0A0D9SF12 145 aa21.32■■□□□ 1
CLN6-222ENST00000637667 MAPK13O15264 365 aa21.32■■□□□ 1
CLN6-222ENST00000637667 LRP3O75074 770 aa21.32■■□□□ 1
CLN6-222ENST00000637667 ASS1P00966 412 aaKnown RBP21.32■■□□□ 1
CLN6-222ENST00000637667 SDHBP21912 280 aa21.32■■□□□ 1
CLN6-222ENST00000637667 PXNP49023 591 aaPredicted RBP21.32■■□□□ 1
CLN6-222ENST00000637667 DPYDQ12882 1025 aa21.32■■□□□ 1
CLN6-222ENST00000637667 KRBA2Q6ZNG9 492 aa21.32■■□□□ 1
CLN6-222ENST00000637667 PDZD8Q8NEN9 1154 aa21.32■■□□□ 1
CLN6-222ENST00000637667 OVCA2Q8WZ82 227 aa21.32■■□□□ 1
CLN6-222ENST00000637667 SMARCD1Q96GM5 515 aa21.32■■□□□ 1
CLN6-222ENST00000637667 POLR3BQ9NW08 1133 aaPredicted RBP21.32■■□□□ 1
CLN6-222ENST00000637667 HLA-DRAP01903 254 aa21.31■■□□□ 1
CLN6-222ENST00000637667 NR2F2P24468 414 aa21.31■■□□□ 1
CLN6-222ENST00000637667 PIK3CAP42336 1068 aa21.31■■□□□ 1
CLN6-222ENST00000637667 VAMP7P51809 220 aa21.31■■□□□ 1
CLN6-222ENST00000637667 NFIL3Q16649 462 aa21.31■■□□□ 1
CLN6-222ENST00000637667 FILIP1Q7Z7B0 1213 aa21.31■■□□□ 1
CLN6-222ENST00000637667 FUKQ8N0W3 1084 aa21.31■■□□□ 1
CLN6-222ENST00000637667 CAMKK1Q8N5S9 505 aa21.31■■□□□ 1
CLN6-222ENST00000637667 FAM160A2Q8N612 972 aaPredicted RBP21.31■■□□□ 1
CLN6-222ENST00000637667 RPLP0P6Q8NHW5 317 aa21.31■■□□□ 1
CLN6-222ENST00000637667 SCAMP5Q8TAC9 235 aa21.31■■□□□ 1
CLN6-222ENST00000637667 GAB3Q8WWW8 586 aa21.31■■□□□ 1
CLN6-222ENST00000637667 GOLPH3LQ9H4A5 285 aa21.31■■□□□ 1
CLN6-222ENST00000637667 KRT82Q9NSB4 513 aa21.31■■□□□ 1
CLN6-222ENST00000637667 CFAP97Q9P2B7 532 aa21.31■■□□□ 1
CLN6-222ENST00000637667 CDV3Q9UKY7 258 aaKnown RBP21.31■■□□□ 1
CLN6-222ENST00000637667 MAPK8IP1Q9UQF2 711 aa21.31■■□□□ 1
CLN6-222ENST00000637667 SLC9A3R1O14745 358 aaPredicted RBP21.3■■□□□ 1
CLN6-222ENST00000637667 TNFRSF10BO14763 440 aa21.3■■□□□ 1
CLN6-222ENST00000637667 AP1G2O75843 785 aa21.3■■□□□ 1
CLN6-222ENST00000637667 CYP17A1P05093 508 aa21.3■■□□□ 1
CLN6-222ENST00000637667 MBL2P11226 248 aaPredicted RBP21.3■■□□□ 1
CLN6-222ENST00000637667 OPRD1P41143 372 aa21.3■■□□□ 1
CLN6-222ENST00000637667 NDST1P52848 882 aa21.3■■□□□ 1
CLN6-222ENST00000637667 SLC5A3P53794 718 aa21.3■■□□□ 1
CLN6-222ENST00000637667 ORC1Q13415 861 aa21.3■■□□□ 1
CLN6-222ENST00000637667 SPOPLQ6IQ16 392 aa21.3■■□□□ 1
CLN6-222ENST00000637667 UNC93AQ86WB7 457 aa21.3■■□□□ 1
CLN6-222ENST00000637667 DDX42Q86XP3 938 aaKnown RBP eCLIP21.3■■□□□ 1
CLN6-222ENST00000637667 CRYBG2Q8N1P7 616 aa21.3■■□□□ 1
CLN6-222ENST00000637667 ACDQ96AP0 544 aa21.3■■□□□ 1
CLN6-222ENST00000637667 HHIPQ96QV1 700 aa21.3■■□□□ 1
CLN6-222ENST00000637667 SEMA4GQ9NTN9 838 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms