RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 PSMG1O95456 288 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 PEX3P56589 373 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 GTF2H3Q13889 308 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 DRAP1Q14919 205 aaPredicted RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 VPS72Q15906 364 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 REXO1L1PQ8IX06 675 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 AMER2Q8N7J2 671 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 RPF1Q9H9Y2 349 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 C12orf4Q9NQ89 552 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TMEM260Q9NX78 707 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 ARPC4-TTLL3A0A0A6YYG9 625 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 C21orf2O43822 256 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 HSMCR30P0CW71 290 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 MYBL2P10244 700 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 IL5RAQ01344 420 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 CENPCQ03188 943 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 MCL1Q07820 350 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 GPR162Q16538 588 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 DDR2Q16832 855 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TYSND1Q2T9J0 566 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 KIAA0408Q6ZU52 694 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 VPS33AQ96AX1 596 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TMEM120AQ9BXJ8 343 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 PRRG3Q9BZD7 231 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 TDRD3Q9H7E2 651 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 GIN1Q9NXP7 522 aa10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-242ENST00000637485 NCOA3Q9Y6Q9 1424 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RTN2O75298 545 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 STARP49675 285 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 OVGP1Q12889 678 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 STXBP2Q15833 593 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RASSF6Q6ZTQ3 369 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 METTL16Q86W50 562 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SHCBP1Q8NEM2 672 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 BDH2Q9BUT1 245 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 NUAK2Q9H093 628 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 IL1RL2Q9HB29 575 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 FKBP14Q9NWM8 211 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 EHD3Q9NZN3 535 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RPL26L1Q9UNX3 145 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 CHKBQ9Y259 395 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 V9GYQ6 96 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 MROH2AA6NES4 1674 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 JCADQ9P266 1359 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 A0A0G2JPF8 293 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 HNRNPCL3B7ZW38 293 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 F5H6K3 240 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 PSMD3O43242 534 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SEC24AO95486 1093 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 HNRNPCL4P0DMR1 293 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RAG1P15918 1043 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RRM2P31350 389 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 EIF3EP60228 445 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 KLRC3Q07444 240 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 PERM1Q5SV97 790 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 C3orf62Q6ZUJ4 267 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 METTL23Q86XA0 190 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 TC2NQ8N9U0 490 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 UXS1Q8NBZ7 420 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 OR7A2PQ8NGA2 310 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 AGAP11Q8TF27 550 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 KCNB2Q92953 911 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SENP7Q9BQF6 1050 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 C9orf16Q9BUW7 83 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 COL3A1P02461 1466 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SLCO1B7G3V0H7 640 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 PRLRP16471 622 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 FLT3P36888 993 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 FBXW4P57775 412 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SPIRE1Q08AE8 756 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 LRRC74AQ0VAA2 488 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 ZFP69Q49AA0 526 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 USP39Q53GS9 565 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 DGKKQ5KSL6 1271 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 VPS37AQ8NEZ2 397 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 TSPAN14Q8NG11 270 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 GJD4Q96KN9 370 aaPredicted RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 XPO7Q9UIA9 1087 aaKnown RBP10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 SLIT1O75093 1534 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 KRT36O76013 467 aa10.03□□□□□ -0.8
CACNA1A-242ENST00000637485 CASP1P29466 404 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms