RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 MAN1A1P33908 653 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 CTNNA1P35221 906 aaKnown RBP22.14■■□□□ 1.13
CLN8-213ENST00000637156 NFE2Q16621 373 aaPredicted RBP22.14■■□□□ 1.13
CLN8-213ENST00000637156 HERC6Q8IVU3 1022 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 NIPA2Q8N8Q9 360 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 ATAD1Q8NBU5 361 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 RIN2Q8WYP3 895 aaPredicted RBP22.14■■□□□ 1.13
CLN8-213ENST00000637156 TMEM169Q96HH4 297 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 PGLYRP2Q96PD5 576 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 EHD2Q9NZN4 543 aa22.14■■□□□ 1.13
CLN8-213ENST00000637156 H7C4K7 107 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 SOD2P04179 222 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 TCF4P15884 667 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 PDGFRAP16234 1089 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 ARPP19P56211 112 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 TAS2R40P59535 323 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 MRPS5P82675 430 aaKnown RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 GPR17Q13304 367 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 CC2D1AQ6P1N0 951 aaPredicted RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 SLC26A9Q7LBE3 791 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 PHOSPHO2Q8TCD6 241 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 RXFP2Q8WXD0 754 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 PBKQ96KB5 322 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 RAD9AQ99638 391 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 LBHD1Q9BQE6 289 aaPredicted RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 DMAP1Q9NPF5 467 aaPredicted RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 ABI2Q9NYB9 513 aaPredicted RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 CCDC66A2RUB6 948 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 ADAM12O43184 909 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 PSMA2P25787 234 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 CTNNA2P26232 953 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 SCNN1AP37088 669 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 GRIK1P39086 918 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 ZNF143P52747 638 aaPredicted RBP22.13■■□□□ 1.13
CLN8-213ENST00000637156 FIBCD1Q8N539 461 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 FBXO22Q8NEZ5 403 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 MYRIPQ8NFW9 859 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 FUBP3Q96I24 572 aaKnown RBP eCLIP22.13■■□□□ 1.13
CLN8-213ENST00000637156 SMARCAL1Q9NZC9 954 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 LCMT1Q9UIC8 334 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 CDY1Q9Y6F8 540 aa22.13■■□□□ 1.13
CLN8-213ENST00000637156 PTPRSQ13332 1948 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 CES2O00748 559 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 ATP2A2P16615 1042 aaKnown RBP22.12■■□□□ 1.13
CLN8-213ENST00000637156 RPL17P18621 184 aaKnown RBP22.12■■□□□ 1.13
CLN8-213ENST00000637156 CCDC14Q49A88 953 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 SH3PXD2AQ5TCZ1 1133 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 SLC8B1Q6J4K2 584 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 KIAA1841Q6NSI8 718 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 RNF19BQ6ZMZ0 732 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 ARCQ7LC44 396 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 DDX53Q86TM3 631 aaKnown RBP22.12■■□□□ 1.13
CLN8-213ENST00000637156 UBL4BQ8N7F7 174 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 PIK3R5Q8WYR1 880 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 CLP1Q92989 425 aaKnown RBP22.12■■□□□ 1.13
CLN8-213ENST00000637156 OXCT2Q9BYC2 517 aaPredicted RBP22.12■■□□□ 1.13
CLN8-213ENST00000637156 MTRRQ9UBK8 725 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 PCDHB5Q9Y5E4 795 aa22.12■■□□□ 1.13
CLN8-213ENST00000637156 CCDC85CA6NKD9 419 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 C2CD2LO14523 706 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 VNN2O95498 520 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 GPD1P21695 349 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 DSG1Q02413 1049 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 EFHC1Q5JVL4 640 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 RASIP1Q5U651 963 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 SIX6OS1Q8N1H7 587 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CFAP57Q96MR6 1250 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 SLC9A7Q96T83 725 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 ULBP1Q9BZM6 244 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 PNPLA8Q9NP80 782 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CNGB3Q9NQW8 809 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 BACE2Q9Y5Z0 518 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 TNFRSF10BO14763 440 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CEP104O60308 925 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 USP17L7P0C7H9 530 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 PYGMP11217 842 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CPB1P15086 417 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 PSMD5Q16401 504 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CEP112Q8N8E3 955 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 SCAMP5Q8TAC9 235 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CLSTN3Q9BQT9 956 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CARD9Q9H257 536 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 CRISPLD1Q9H336 500 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 AAASQ9NRG9 546 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 PCDHB12Q9Y5F1 795 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 USP3Q9Y6I4 520 aa22.11■■□□□ 1.13
CLN8-213ENST00000637156 LCHNA4D1U4 455 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 CARNS1A5YM72 827 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 LRCH4O75427 683 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 ZNF211Q13398 564 aaPredicted RBP22.1■■□□□ 1.13
CLN8-213ENST00000637156 DDR2Q16832 855 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 C15orf59Q2T9L4 293 aaPredicted RBP22.1■■□□□ 1.13
CLN8-213ENST00000637156 ATP13A4Q4VNC1 1196 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 RAB6CQ53S08 254 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 TXNRD3NBQ6F5E7 133 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 PM20D1Q6GTS8 502 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 AADACL2Q6P093 401 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 VSTM1Q6UX27 236 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 RHOT1Q8IXI2 618 aa22.1■■□□□ 1.13
CLN8-213ENST00000637156 RASGEF1CQ8N431 466 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms