RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 SMOQ99835 787 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 NGRNQ9NPE2 291 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 TTC7AQ9ULT0 858 aaPredicted RBP14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 CAND2O75155 1236 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 BDNFP23560 247 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 RPL9P32969 192 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 FAM189BP81408 668 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 SLC25A11Q02978 314 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 TRIP13Q15645 432 aaPredicted RBP14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 CCDC14Q49A88 953 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 COLGALT2Q8IYK4 626 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 ZMIZ2Q8NF64 920 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 LRRN4Q8WUT4 740 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 VWCEQ96DN2 955 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 RASSF4Q9H2L5 321 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 SQORQ9Y6N5 450 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
SMARCA2-254ENST00000636903 CCDC188H7C350 402 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 DAPK3O43293 454 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 AP1G2O75843 785 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 C1QTNF8P60827 252 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 SLC6A3Q01959 620 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 MMRN1Q13201 1228 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 LRRC26Q2I0M4 334 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 MYLPFQ96A32 169 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 FAM124BQ9H5Z6 455 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 PRDM5Q9NQX1 630 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 PCDHB7Q9Y5E2 793 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 NRP1O14786 923 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 PIGHQ14442 188 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 OVOS1Q6IE37 1185 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 FAM35AQ86V20 835 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 ABI1Q8IZP0 508 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 ADAM32Q8TC27 787 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 PGLYRP2Q96PD5 576 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 HNRNPABQ99729 332 aaKnown RBP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 FUT8Q9BYC5 575 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 OSBPL8Q9BZF1 889 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCA2-254ENST00000636903 PDE4DIPQ5VU43 2346 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 DCDC2CA8MYV0 355 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 PSTPIP1O43586 416 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 MAP3K6O95382 1288 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 EOMESO95936 686 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 ODC1P11926 461 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 NPR3P17342 541 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 GPD1P21695 349 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 VPS41P49754 854 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 DSC1Q08554 894 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CCDC137Q6PK04 289 aaKnown RBP14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CYP4V2Q6ZWL3 525 aaPredicted RBP14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CASD1Q96PB1 797 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 FAM193BQ96PV7 902 aaPredicted RBP14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 GPR62Q9BZJ7 368 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 TBKBP1A7MCY6 615 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 DR1Q01658 176 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 STILQ15468 1287 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CLUL1Q15846 466 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CA9Q16790 459 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 MAP9Q49MG5 647 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 ZC3H12AQ5D1E8 599 aaKnown RBP14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CCDC105Q8IYK2 499 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 KATNAL2Q8IYT4 538 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 SEPT8Q92599 483 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 RUBCNQ92622 972 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 WDR35Q9P2L0 1181 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 LRFN2Q9ULH4 789 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 USP18Q9UMW8 372 aa14.32□□□□□ -0.12
SMARCA2-254ENST00000636903 CEP290O15078 2479 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 USP17L7P0C7H9 530 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 HSPA8P11142 646 aaKnown RBP14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 SKIP12755 728 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 LHX1P48742 406 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 ARPP19P56211 112 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 ADCY1Q08828 1119 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 SYPL2Q5VXT5 272 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 NETO2Q8NC67 525 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 SCAMP5Q8TAC9 235 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 GPR152Q8TDT2 470 aa14.31□□□□□ -0.12
SMARCA2-254ENST00000636903 CRISPLD2Q9H0B8 497 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms